RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 PHLDA3Q9Y5J5 127 aa5.61□□□□□ -1.51
SMAD4-204ENST00000586253 TRAV26-1A0A087WT03 109 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 TMSB15BA0A087X1C1 80 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 GRIFINA4D1Z8 144 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 PGPEP1LA6NFU8 196 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 ZNF727A8MUV8 499 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 A8MWV9 139 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 K7EN84 100 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 RS1O15537 224 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 SNAI2O43623 268 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 OR5AL1P0C617 328 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 P0DMU3 169 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 FAM231AP0DMU4 169 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 FAM231CP0DMU5 169 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 CEBPGP53567 150 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 RPL19P84098 196 aaKnown RBP5.6□□□□□ -1.51
SMAD4-204ENST00000586253 IFITM2Q01629 132 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 FHL2Q14192 279 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 CFAP126Q5VTH2 177 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 FAM231DQ6ZW35 169 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 ZFP82Q8N141 532 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 OCC1Q8TAD7 63 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 ZNF479Q96JC4 524 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 PRO0255Q9UI72 69 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 HHLA3Q9XRX5 114 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 NACAE9PAV3 2078 aa5.6□□□□□ -1.51
SMAD4-204ENST00000586253 ALMS1Q8TCU4 4167 aa5.59□□□□□ -1.51
SMAD4-204ENST00000586253 TRGV4A0A0C4DH28 118 aa5.59□□□□□ -1.51
SMAD4-204ENST00000586253 C9JQL5 133 aa5.59□□□□□ -1.51
SMAD4-204ENST00000586253 NXPH4O95158 308 aa5.59□□□□□ -1.51
SMAD4-204ENST00000586253 LY6G6CO95867 125 aa5.59□□□□□ -1.51
SMAD4-204ENST00000586253 IGHV3-53P01767 116 aa5.59□□□□□ -1.51
SMAD4-204ENST00000586253 SFTA3P0C7M3 94 aa5.59□□□□□ -1.51
SMAD4-204ENST00000586253 CRYBA4P53673 196 aa5.59□□□□□ -1.51
SMAD4-204ENST00000586253 RNF212Q495C1 297 aa5.59□□□□□ -1.51
SMAD4-204ENST00000586253 ZFP2Q6ZN57 461 aa5.59□□□□□ -1.51
SMAD4-204ENST00000586253 LINC01551Q86U37 167 aa5.59□□□□□ -1.51
SMAD4-204ENST00000586253 OR2D3Q8NGH3 330 aa5.59□□□□□ -1.51
SMAD4-204ENST00000586253 VSIG2Q96IQ7 327 aa5.59□□□□□ -1.51
SMAD4-204ENST00000586253 KMT2CQ8NEZ4 4911 aaKnown RBP5.59□□□□□ -1.52
SMAD4-204ENST00000586253 KMT2AQ03164 3969 aa5.58□□□□□ -1.52
SMAD4-204ENST00000586253 A0A0J9YY99 117 aa5.58□□□□□ -1.52
SMAD4-204ENST00000586253 A0A1W2PPQ1 181 aa5.58□□□□□ -1.52
SMAD4-204ENST00000586253 PRSS47A8MTI9 375 aa5.58□□□□□ -1.52
SMAD4-204ENST00000586253 F2Z2F3 143 aa5.58□□□□□ -1.52
SMAD4-204ENST00000586253 RHODO00212 210 aa5.58□□□□□ -1.52
SMAD4-204ENST00000586253 NUDT3O95989 172 aa5.58□□□□□ -1.52
SMAD4-204ENST00000586253 IGLC6P0CF74 106 aa5.58□□□□□ -1.52
SMAD4-204ENST00000586253 GATA1P15976 413 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-204ENST00000586253 FAM3BP58499 235 aaPredicted RBP5.58□□□□□ -1.52
SMAD4-204ENST00000586253 SOHLH1Q5JUK2 328 aa5.58□□□□□ -1.52
SMAD4-204ENST00000586253 UFSP1Q6NVU6 142 aa5.58□□□□□ -1.52
SMAD4-204ENST00000586253 RNASE7Q9H1E1 156 aaKnown RBP5.58□□□□□ -1.52
SMAD4-204ENST00000586253 RPP21Q9H633 154 aaKnown RBP5.58□□□□□ -1.52
SMAD4-204ENST00000586253 NAT8Q9UHE5 227 aa5.58□□□□□ -1.52
SMAD4-204ENST00000586253 A0A096LPF7 62 aa5.57□□□□□ -1.52
SMAD4-204ENST00000586253 TRBV6-4A0A1B0GX49 114 aa5.57□□□□□ -1.52
SMAD4-204ENST00000586253 M0R381 172 aa5.57□□□□□ -1.52
SMAD4-204ENST00000586253 CTRLP40313 264 aa5.57□□□□□ -1.52
SMAD4-204ENST00000586253 CCL18P55774 89 aa5.57□□□□□ -1.52
SMAD4-204ENST00000586253 ERVFC1-1P60608 527 aa5.57□□□□□ -1.52
SMAD4-204ENST00000586253 CACNG7P62955 275 aa5.57□□□□□ -1.52
SMAD4-204ENST00000586253 MRPL23Q16540 153 aaKnown RBP5.57□□□□□ -1.52
SMAD4-204ENST00000586253 TMEM241Q24JQ0 296 aa5.57□□□□□ -1.52
SMAD4-204ENST00000586253 FER1L6-AS1Q8NA97 138 aa5.57□□□□□ -1.52
SMAD4-204ENST00000586253 OR10AG1Q8NH19 301 aa5.57□□□□□ -1.52
SMAD4-204ENST00000586253 SFRP2Q96HF1 295 aa5.57□□□□□ -1.52
SMAD4-204ENST00000586253 CNFNQ9BYD5 112 aa5.57□□□□□ -1.52
SMAD4-204ENST00000586253 OSTCQ9NRP0 149 aa5.57□□□□□ -1.52
SMAD4-204ENST00000586253 ICOSQ9Y6W8 199 aa5.57□□□□□ -1.52
SMAD4-204ENST00000586253 GATCO43716 136 aaKnown RBP5.56□□□□□ -1.52
SMAD4-204ENST00000586253 CRYGDP07320 174 aa5.56□□□□□ -1.52
SMAD4-204ENST00000586253 GZMBP10144 247 aa5.56□□□□□ -1.52
SMAD4-204ENST00000586253 RPL23P62829 140 aaKnown RBP5.56□□□□□ -1.52
SMAD4-204ENST00000586253 RHOHQ15669 191 aa5.56□□□□□ -1.52
SMAD4-204ENST00000586253 SPANXN1Q5VSR9 72 aa5.56□□□□□ -1.52
SMAD4-204ENST00000586253 WDR73Q6P4I2 378 aa5.56□□□□□ -1.52
SMAD4-204ENST00000586253 UQCC3Q6UW78 93 aa5.56□□□□□ -1.52
SMAD4-204ENST00000586253 SH2D6Q7Z4S9 175 aa5.56□□□□□ -1.52
SMAD4-204ENST00000586253 ISOC2Q96AB3 205 aa5.56□□□□□ -1.52
SMAD4-204ENST00000586253 PRADC1Q9BSG0 188 aa5.56□□□□□ -1.52
SMAD4-204ENST00000586253 FAM231BA6NCW3 169 aa5.55□□□□□ -1.52
SMAD4-204ENST00000586253 A8MWL6 223 aa5.55□□□□□ -1.52
SMAD4-204ENST00000586253 K7EQD1 137 aa5.55□□□□□ -1.52
SMAD4-204ENST00000586253 SRIP30626 198 aa5.55□□□□□ -1.52
SMAD4-204ENST00000586253 FOXA3P55318 350 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-204ENST00000586253 NEGR1Q7Z3B1 354 aa5.55□□□□□ -1.52
SMAD4-204ENST00000586253 UBE2DNLQ8IWF7 75 aa5.55□□□□□ -1.52
SMAD4-204ENST00000586253 C15orf54Q8N8G6 183 aa5.55□□□□□ -1.52
SMAD4-204ENST00000586253 SLC25A29Q8N8R3 303 aa5.55□□□□□ -1.52
SMAD4-204ENST00000586253 AP1S3Q96PC3 154 aa5.55□□□□□ -1.52
SMAD4-204ENST00000586253 TPPP3Q9BW30 176 aa5.55□□□□□ -1.52
SMAD4-204ENST00000586253 SAMD10Q9BYL1 202 aa5.55□□□□□ -1.52
SMAD4-204ENST00000586253 GFRA4Q9GZZ7 299 aa5.55□□□□□ -1.52
SMAD4-204ENST00000586253 JPT2Q9H910 190 aa5.55□□□□□ -1.52
SMAD4-204ENST00000586253 DNAH1Q9P2D7 4330 aa5.54□□□□□ -1.52
SMAD4-204ENST00000586253 IGHV3-73A0A0B4J1V6 119 aa5.54□□□□□ -1.52
SMAD4-204ENST00000586253 TRBV10-1A0A0K0K1A3 114 aa5.54□□□□□ -1.52
SMAD4-204ENST00000586253 TRGC1P0CF51 173 aa5.54□□□□□ -1.52
SMAD4-204ENST00000586253 SMIM17P0DL12 118 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms