RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 HIST1H4GQ99525 98 aa9.34□□□□□ -0.91
SMARCA4-208ENST00000585799 MRPL16Q9NX20 251 aaKnown RBP9.34□□□□□ -0.91
SMARCA4-208ENST00000585799 PLA2G2AP14555 144 aa9.33□□□□□ -0.92
SMARCA4-208ENST00000585799 CRIP2P52943 208 aaPredicted RBP9.33□□□□□ -0.92
SMARCA4-208ENST00000585799 FOXI2Q6ZQN5 318 aa9.33□□□□□ -0.92
SMARCA4-208ENST00000585799 PCP2Q8IVA1 136 aa9.33□□□□□ -0.92
SMARCA4-208ENST00000585799 TP53TG1Q9Y2A0 90 aa9.33□□□□□ -0.92
SMARCA4-208ENST00000585799 CELSR2Q9HCU4 2923 aa9.33□□□□□ -0.92
SMARCA4-208ENST00000585799 TRGV2A0A075B6R0 118 aa9.33□□□□□ -0.92
SMARCA4-208ENST00000585799 RNF151Q2KHN1 245 aa9.33□□□□□ -0.92
SMARCA4-208ENST00000585799 Q8N976 141 aa9.33□□□□□ -0.92
SMARCA4-208ENST00000585799 DCANP1Q8TF63 244 aa9.33□□□□□ -0.92
SMARCA4-208ENST00000585799 CD5LO43866 347 aa9.32□□□□□ -0.92
SMARCA4-208ENST00000585799 F8P00451 2351 aa9.32□□□□□ -0.92
SMARCA4-208ENST00000585799 HERVK_113P61574 105 aa9.32□□□□□ -0.92
SMARCA4-208ENST00000585799 LINC00469Q8N7U9 141 aa9.32□□□□□ -0.92
SMARCA4-208ENST00000585799 GATD1Q8NB37 220 aa9.32□□□□□ -0.92
SMARCA4-208ENST00000585799 VCYO14598 125 aa9.32□□□□□ -0.92
SMARCA4-208ENST00000585799 ITPR2Q14571 2701 aa9.31□□□□□ -0.92
SMARCA4-208ENST00000585799 A6NDN8 102 aa9.31□□□□□ -0.92
SMARCA4-208ENST00000585799 H7C1H1 209 aa9.31□□□□□ -0.92
SMARCA4-208ENST00000585799 INSP01308 110 aa9.31□□□□□ -0.92
SMARCA4-208ENST00000585799 RNASE13Q5GAN3 156 aaKnown RBP9.31□□□□□ -0.92
SMARCA4-208ENST00000585799 LINC01545Q5VT33 79 aa9.31□□□□□ -0.92
SMARCA4-208ENST00000585799 SUMO4Q6EEV6 95 aa9.31□□□□□ -0.92
SMARCA4-208ENST00000585799 SFTA2Q6UW10 78 aa9.31□□□□□ -0.92
SMARCA4-208ENST00000585799 PSMG3-AS1Q96PY0 264 aa9.31□□□□□ -0.92
SMARCA4-208ENST00000585799 ZNF415Q09FC8 603 aa9.31□□□□□ -0.92
SMARCA4-208ENST00000585799 LGALS9BQ3B8N2 356 aa9.3□□□□□ -0.92
SMARCA4-208ENST00000585799 C19orf54Q5BKX5 351 aa9.3□□□□□ -0.92
SMARCA4-208ENST00000585799 LGALS9CQ6DKI2 356 aa9.3□□□□□ -0.92
SMARCA4-208ENST00000585799 RPL39P62891 51 aaKnown RBP9.3□□□□□ -0.92
SMARCA4-208ENST00000585799 TMEM89A2RUT3 159 aa9.3□□□□□ -0.92
SMARCA4-208ENST00000585799 RNASE3P12724 160 aaKnown RBP9.29□□□□□ -0.92
SMARCA4-208ENST00000585799 UNC79Q9P2D8 2635 aa9.29□□□□□ -0.92
SMARCA4-208ENST00000585799 CELSR1Q9NYQ6 3014 aa9.29□□□□□ -0.92
SMARCA4-208ENST00000585799 K7EMI3 77 aa9.29□□□□□ -0.92
SMARCA4-208ENST00000585799 P0DMU3 169 aa9.29□□□□□ -0.92
SMARCA4-208ENST00000585799 FAM231AP0DMU4 169 aa9.29□□□□□ -0.92
SMARCA4-208ENST00000585799 FAM231CP0DMU5 169 aa9.29□□□□□ -0.92
SMARCA4-208ENST00000585799 RASL10AQ92737 203 aa9.29□□□□□ -0.92
SMARCA4-208ENST00000585799 VCX2Q9H322 139 aa9.29□□□□□ -0.92
SMARCA4-208ENST00000585799 NHP2Q9NX24 153 aaKnown RBP9.29□□□□□ -0.92
SMARCA4-208ENST00000585799 BSNQ9UPA5 3926 aa9.29□□□□□ -0.92
SMARCA4-208ENST00000585799 C4orf3Q8WVX3 66 aa9.28□□□□□ -0.92
SMARCA4-208ENST00000585799 TSSC4Q9Y5U2 329 aaPredicted RBP9.28□□□□□ -0.92
SMARCA4-208ENST00000585799 H3BUT2 72 aa9.28□□□□□ -0.92
SMARCA4-208ENST00000585799 H7C2G1 150 aa9.28□□□□□ -0.92
SMARCA4-208ENST00000585799 SOCS3O14543 225 aa9.28□□□□□ -0.92
SMARCA4-208ENST00000585799 MRPS16Q9Y3D3 137 aaKnown RBP9.28□□□□□ -0.92
SMARCA4-208ENST00000585799 PRSS2P07478 247 aa9.28□□□□□ -0.92
SMARCA4-208ENST00000585799 ATRQ13535 2644 aa9.28□□□□□ -0.92
SMARCA4-208ENST00000585799 COX8AP10176 69 aa9.27□□□□□ -0.92
SMARCA4-208ENST00000585799 AMMECR1LQ6DCA0 310 aa9.27□□□□□ -0.92
SMARCA4-208ENST00000585799 MAP6D1Q9H9H5 199 aa9.27□□□□□ -0.92
SMARCA4-208ENST00000585799 TEP1Q99973 2627 aaKnown RBP9.27□□□□□ -0.93
SMARCA4-208ENST00000585799 GCN1Q92616 2671 aaKnown RBP9.27□□□□□ -0.93
SMARCA4-208ENST00000585799 ADAMTSL5Q6ZMM2 481 aa9.27□□□□□ -0.93
SMARCA4-208ENST00000585799 WFDC10AQ9H1F0 79 aa9.27□□□□□ -0.93
SMARCA4-208ENST00000585799 ZNF815PA8K554 130 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 DEFB130BP0DP73 79 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 DEFB130AP0DP74 79 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 DEFB114Q30KQ6 69 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 GAGE10A6NGK3 116 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 PRSS29PA6NIE9 313 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 LGALS3P17931 250 aaKnown RBP9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 LINC01006Q8NI28 216 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 ORAOV1Q8WV07 137 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 OPRPNQ99935 248 aaPredicted RBP9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 GAGE12BA1L429 117 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 H3BMM0 161 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 GAGE7O76087 117 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 NPSP0C0P6 89 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 GAGE12FP0CL80 117 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 GAGE12GP0CL81 117 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 GAGE12IP0CL82 117 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 HTN3P15516 51 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 PROK1P58294 105 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 SPAG8Q99932 426 aaPredicted RBP9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 ESM1Q9NQ30 184 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 U3KQK5 164 aa9.26□□□□□ -0.93
SMARCA4-208ENST00000585799 A0A096LNT2 108 aa9.25□□□□□ -0.93
SMARCA4-208ENST00000585799 INAFM1C9JVW0 142 aa9.25□□□□□ -0.93
SMARCA4-208ENST00000585799 APOMO95445 188 aa9.25□□□□□ -0.93
SMARCA4-208ENST00000585799 Q1RN00 199 aa9.25□□□□□ -0.93
SMARCA4-208ENST00000585799 TRPT1Q86TN4 253 aaKnown RBP9.25□□□□□ -0.93
SMARCA4-208ENST00000585799 C20orf78Q9BR46 151 aa9.25□□□□□ -0.93
SMARCA4-208ENST00000585799 LGALS9O00182 355 aa9.25□□□□□ -0.93
SMARCA4-208ENST00000585799 GEMIN7Q9H840 131 aaKnown RBP9.25□□□□□ -0.93
SMARCA4-208ENST00000585799 A0A096LNJ9 63 aa9.25□□□□□ -0.93
SMARCA4-208ENST00000585799 DLEU1O43261 78 aa9.25□□□□□ -0.93
SMARCA4-208ENST00000585799 COTL1Q14019 142 aa9.25□□□□□ -0.93
SMARCA4-208ENST00000585799 TRGV4A0A0C4DH28 118 aa9.24□□□□□ -0.93
SMARCA4-208ENST00000585799 A0A0U1RRA0 63 aa9.24□□□□□ -0.93
SMARCA4-208ENST00000585799 ODF1Q14990 250 aa9.24□□□□□ -0.93
SMARCA4-208ENST00000585799 NRACQ8N912 160 aa9.24□□□□□ -0.93
SMARCA4-208ENST00000585799 KLLNB2CW77 178 aa9.24□□□□□ -0.93
SMARCA4-208ENST00000585799 FOSL1P15407 271 aa9.24□□□□□ -0.93
SMARCA4-208ENST00000585799 GAGE12JA6NER3 117 aa9.24□□□□□ -0.93
SMARCA4-208ENST00000585799 HLA-DRB4P13762 266 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms