RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 ARMS2P0C7Q2 107 aa6.92□□□□□ -1.3
GGA3-219ENST00000584550 TAGLN2P37802 199 aaKnown RBP6.92□□□□□ -1.3
GGA3-219ENST00000584550 GNG4P50150 75 aa6.92□□□□□ -1.3
GGA3-219ENST00000584550 CEBPGP53567 150 aa6.92□□□□□ -1.3
GGA3-219ENST00000584550 RPL19P84098 196 aaKnown RBP6.92□□□□□ -1.3
GGA3-219ENST00000584550 ZNF506Q5JVG8 444 aa6.92□□□□□ -1.3
GGA3-219ENST00000584550 SLC7A5P1Q8MH63 180 aa6.92□□□□□ -1.3
GGA3-219ENST00000584550 MLST8Q9BVC4 326 aa6.92□□□□□ -1.3
GGA3-219ENST00000584550 PRO0255Q9UI72 69 aa6.92□□□□□ -1.3
GGA3-219ENST00000584550 A0A096LPF7 62 aa6.91□□□□□ -1.3
GGA3-219ENST00000584550 NXPH4O95158 308 aa6.91□□□□□ -1.3
GGA3-219ENST00000584550 CRYBA4P53673 196 aa6.91□□□□□ -1.3
GGA3-219ENST00000584550 LINC01559Q495D7 138 aa6.91□□□□□ -1.3
GGA3-219ENST00000584550 TOR2AQ5JU69 321 aa6.91□□□□□ -1.3
GGA3-219ENST00000584550 EIF5A2Q9GZV4 153 aaKnown RBP6.91□□□□□ -1.3
GGA3-219ENST00000584550 IGLV5-52A0A0A0MRZ9 124 aa6.9□□□□□ -1.3
GGA3-219ENST00000584550 H3BNG1 76 aa6.9□□□□□ -1.3
GGA3-219ENST00000584550 PLA2G1BP04054 148 aaKnown RBP6.9□□□□□ -1.3
GGA3-219ENST00000584550 SSTP61278 116 aa6.9□□□□□ -1.3
GGA3-219ENST00000584550 SLAQ13239 276 aa6.9□□□□□ -1.3
GGA3-219ENST00000584550 CFAP126Q5VTH2 177 aa6.9□□□□□ -1.3
GGA3-219ENST00000584550 DAZAP1Q96EP5 407 aaKnown RBP6.9□□□□□ -1.3
GGA3-219ENST00000584550 JPT2Q9H910 190 aa6.9□□□□□ -1.3
GGA3-219ENST00000584550 IL36BQ9NZH7 164 aa6.9□□□□□ -1.3
GGA3-219ENST00000584550 FAM30AQ9NZY2 134 aa6.9□□□□□ -1.3
GGA3-219ENST00000584550 PHLDA3Q9Y5J5 127 aa6.9□□□□□ -1.3
GGA3-219ENST00000584550 ICOSQ9Y6W8 199 aa6.9□□□□□ -1.3
GGA3-219ENST00000584550 MUC21A0A0G2JKD1 596 aa6.89□□□□□ -1.31
GGA3-219ENST00000584550 MUC21A0A140T8X8 626 aa6.89□□□□□ -1.31
GGA3-219ENST00000584550 M0R381 172 aa6.89□□□□□ -1.31
GGA3-219ENST00000584550 RS1O15537 224 aa6.89□□□□□ -1.31
GGA3-219ENST00000584550 IGLV2-8P01709 118 aa6.89□□□□□ -1.31
GGA3-219ENST00000584550 GYPEP15421 78 aa6.89□□□□□ -1.31
GGA3-219ENST00000584550 DMRTA1Q5VZB9 504 aa6.89□□□□□ -1.31
GGA3-219ENST00000584550 TEX261Q6UWH6 196 aa6.89□□□□□ -1.31
GGA3-219ENST00000584550 NFE4Q86UQ8 179 aa6.89□□□□□ -1.31
GGA3-219ENST00000584550 LYPD6BQ8NI32 183 aa6.89□□□□□ -1.31
GGA3-219ENST00000584550 DEFB104AQ8WTQ1 72 aa6.89□□□□□ -1.31
GGA3-219ENST00000584550 TMEM70Q9BUB7 260 aa6.89□□□□□ -1.31
GGA3-219ENST00000584550 TRBV20OR9-2A0A075B6H5 130 aa6.88□□□□□ -1.31
GGA3-219ENST00000584550 LOC100131303A0A0U1RQF7 123 aa6.88□□□□□ -1.31
GGA3-219ENST00000584550 MRPL23Q16540 153 aaKnown RBP6.88□□□□□ -1.31
GGA3-219ENST00000584550 DNLZQ5SXM8 178 aa6.88□□□□□ -1.31
GGA3-219ENST00000584550 OR2D3Q8NGH3 330 aa6.88□□□□□ -1.31
GGA3-219ENST00000584550 PTH2Q96A98 100 aa6.88□□□□□ -1.31
GGA3-219ENST00000584550 TPPP3Q9BW30 176 aa6.88□□□□□ -1.31
GGA3-219ENST00000584550 PARLQ9H300 379 aa6.88□□□□□ -1.31
GGA3-219ENST00000584550 DNAH8Q96JB1 4490 aa6.88□□□□□ -1.31
GGA3-219ENST00000584550 A0A087WWL8 130 aa6.87□□□□□ -1.31
GGA3-219ENST00000584550 A8MWV9 139 aa6.87□□□□□ -1.31
GGA3-219ENST00000584550 K7EQD1 137 aa6.87□□□□□ -1.31
GGA3-219ENST00000584550 P01737 135 aa6.87□□□□□ -1.31
GGA3-219ENST00000584550 GZMBP10144 247 aa6.87□□□□□ -1.31
GGA3-219ENST00000584550 GATA1P15976 413 aaPredicted RBP6.87□□□□□ -1.31
GGA3-219ENST00000584550 SRIP30626 198 aa6.87□□□□□ -1.31
GGA3-219ENST00000584550 FAM74A4Q5TZK3 123 aa6.87□□□□□ -1.31
GGA3-219ENST00000584550 ZFP82Q8N141 532 aa6.87□□□□□ -1.31
GGA3-219ENST00000584550 LINC00528Q8N1L1 170 aa6.87□□□□□ -1.31
GGA3-219ENST00000584550 OCC1Q8TAD7 63 aa6.87□□□□□ -1.31
GGA3-219ENST00000584550 SAMD10Q9BYL1 202 aa6.87□□□□□ -1.31
GGA3-219ENST00000584550 RNF213Q63HN8 5207 aa6.87□□□□□ -1.31
GGA3-219ENST00000584550 FAT3Q8TDW7 4589 aa6.86□□□□□ -1.31
GGA3-219ENST00000584550 TMEM250H0YL14 139 aa6.86□□□□□ -1.31
GGA3-219ENST00000584550 SPANXN1Q5VSR9 72 aa6.86□□□□□ -1.31
GGA3-219ENST00000584550 NEGR1Q7Z3B1 354 aa6.86□□□□□ -1.31
GGA3-219ENST00000584550 SLC25A29Q8N8R3 303 aa6.86□□□□□ -1.31
GGA3-219ENST00000584550 OR10AG1Q8NH19 301 aa6.86□□□□□ -1.31
GGA3-219ENST00000584550 SMIM12Q96EX1 92 aa6.86□□□□□ -1.31
GGA3-219ENST00000584550 PRADC1Q9BSG0 188 aa6.86□□□□□ -1.31
GGA3-219ENST00000584550 BIN3Q9NQY0 253 aa6.86□□□□□ -1.31
GGA3-219ENST00000584550 MSRB1Q9NZV6 116 aa6.86□□□□□ -1.31
GGA3-219ENST00000584550 TRAV9-2A0A087WT02 112 aa6.85□□□□□ -1.31
GGA3-219ENST00000584550 C19orf71A6NCJ1 209 aa6.85□□□□□ -1.31
GGA3-219ENST00000584550 K7EN84 100 aa6.85□□□□□ -1.31
GGA3-219ENST00000584550 CIDEAO60543 219 aa6.85□□□□□ -1.31
GGA3-219ENST00000584550 SRP19P09132 144 aaKnown RBP6.85□□□□□ -1.31
GGA3-219ENST00000584550 CXCL1P09341 107 aa6.85□□□□□ -1.31
GGA3-219ENST00000584550 RPS20P60866 119 aaKnown RBP6.85□□□□□ -1.31
GGA3-219ENST00000584550 LYPD5Q6UWN5 251 aa6.85□□□□□ -1.31
GGA3-219ENST00000584550 NUDT10Q8NFP7 164 aa6.85□□□□□ -1.31
GGA3-219ENST00000584550 NUDT11Q96G61 164 aa6.85□□□□□ -1.31
GGA3-219ENST00000584550 SFRP2Q96HF1 295 aa6.85□□□□□ -1.31
GGA3-219ENST00000584550 SMIM7Q9BQ49 75 aa6.85□□□□□ -1.31
GGA3-219ENST00000584550 RNASE7Q9H1E1 156 aaKnown RBP6.85□□□□□ -1.31
GGA3-219ENST00000584550 LY96Q9Y6Y9 160 aa6.85□□□□□ -1.31
GGA3-219ENST00000584550 TRBV6-4A0A1B0GX49 114 aa6.84□□□□□ -1.31
GGA3-219ENST00000584550 XKRY2A2RUG3 117 aa6.84□□□□□ -1.31
GGA3-219ENST00000584550 GAGE12JA6NER3 117 aa6.84□□□□□ -1.31
GGA3-219ENST00000584550 ZNF727A8MUV8 499 aa6.84□□□□□ -1.31
GGA3-219ENST00000584550 GAGE1Q13065 139 aa6.84□□□□□ -1.31
GGA3-219ENST00000584550 GAGE4Q13068 117 aa6.84□□□□□ -1.31
GGA3-219ENST00000584550 GAGE5Q13069 117 aa6.84□□□□□ -1.31
GGA3-219ENST00000584550 RHOHQ15669 191 aa6.84□□□□□ -1.31
GGA3-219ENST00000584550 GAGE13Q4V321 117 aa6.84□□□□□ -1.31
GGA3-219ENST00000584550 PIK3CD-AS1Q5SR53 167 aa6.84□□□□□ -1.31
GGA3-219ENST00000584550 ZFP2Q6ZN57 461 aa6.84□□□□□ -1.31
GGA3-219ENST00000584550 C14orf178Q8N769 122 aaPredicted RBP6.84□□□□□ -1.31
GGA3-219ENST00000584550 FER1L6-AS1Q8NA97 138 aa6.84□□□□□ -1.31
GGA3-219ENST00000584550 RHODO00212 210 aa6.83□□□□□ -1.32
GGA3-219ENST00000584550 SNAI2O43623 268 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms