RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 C18orf15Q96N68 181 aa11.62□□□□□ -0.55
CDK5RAP3-228ENST00000583363 BIRC6Q9NR09 4857 aa11.62□□□□□ -0.55
CDK5RAP3-228ENST00000583363 TEX48A0A1B0GUV7 120 aa11.61□□□□□ -0.55
CDK5RAP3-228ENST00000583363 A8MWV9 139 aa11.61□□□□□ -0.55
CDK5RAP3-228ENST00000583363 CRYGDP07320 174 aa11.61□□□□□ -0.55
CDK5RAP3-228ENST00000583363 TRGC1P0CF51 173 aa11.61□□□□□ -0.55
CDK5RAP3-228ENST00000583363 DEFB130BP0DP73 79 aa11.61□□□□□ -0.55
CDK5RAP3-228ENST00000583363 DEFB130AP0DP74 79 aa11.61□□□□□ -0.55
CDK5RAP3-228ENST00000583363 CAMPP49913 170 aa11.61□□□□□ -0.55
CDK5RAP3-228ENST00000583363 HBBP68871 147 aa11.61□□□□□ -0.55
CDK5RAP3-228ENST00000583363 CFAP126Q5VTH2 177 aa11.61□□□□□ -0.55
CDK5RAP3-228ENST00000583363 RASL11AQ6T310 242 aa11.61□□□□□ -0.55
CDK5RAP3-228ENST00000583363 GATD1Q8NB37 220 aa11.61□□□□□ -0.55
CDK5RAP3-228ENST00000583363 KIF25-AS1Q9Y6Z4 181 aa11.61□□□□□ -0.55
CDK5RAP3-228ENST00000583363 TRGV2A0A075B6R0 118 aa11.6□□□□□ -0.55
CDK5RAP3-228ENST00000583363 COLCA2A8K830 154 aa11.6□□□□□ -0.55
CDK5RAP3-228ENST00000583363 S100A8P05109 93 aa11.6□□□□□ -0.55
CDK5RAP3-228ENST00000583363 EVI2AP22794 236 aa11.6□□□□□ -0.55
CDK5RAP3-228ENST00000583363 CASC10Q5T4H9 136 aa11.6□□□□□ -0.55
CDK5RAP3-228ENST00000583363 C14orf178Q8N769 122 aaPredicted RBP11.6□□□□□ -0.55
CDK5RAP3-228ENST00000583363 FAM210BQ96KR6 192 aa11.6□□□□□ -0.55
CDK5RAP3-228ENST00000583363 SAMD10Q9BYL1 202 aa11.6□□□□□ -0.55
CDK5RAP3-228ENST00000583363 TMEM191AQ9H0A3 160 aa11.6□□□□□ -0.55
CDK5RAP3-228ENST00000583363 TRAV4A0A0B4J268 109 aa11.59□□□□□ -0.55
CDK5RAP3-228ENST00000583363 DAD1P61803 113 aa11.59□□□□□ -0.55
CDK5RAP3-228ENST00000583363 C12orf74Q32Q52 190 aa11.59□□□□□ -0.55
CDK5RAP3-228ENST00000583363 UFSP1Q6NVU6 142 aa11.59□□□□□ -0.55
CDK5RAP3-228ENST00000583363 SMIM15Q7Z3B0 74 aa11.59□□□□□ -0.55
CDK5RAP3-228ENST00000583363 OR4C5Q8NGB2 326 aa11.59□□□□□ -0.55
CDK5RAP3-228ENST00000583363 MUC7Q8TAX7 377 aa11.59□□□□□ -0.55
CDK5RAP3-228ENST00000583363 AP1S3Q96PC3 154 aa11.59□□□□□ -0.55
CDK5RAP3-228ENST00000583363 DNAH1Q9P2D7 4330 aa11.59□□□□□ -0.55
CDK5RAP3-228ENST00000583363 A0A087WWL8 130 aa11.58□□□□□ -0.56
CDK5RAP3-228ENST00000583363 LINC00315P59091 139 aa11.58□□□□□ -0.56
CDK5RAP3-228ENST00000583363 CIDEAO60543 219 aa11.57□□□□□ -0.56
CDK5RAP3-228ENST00000583363 SMIM17P0DL12 118 aa11.57□□□□□ -0.56
CDK5RAP3-228ENST00000583363 COX19Q49B96 90 aa11.57□□□□□ -0.56
CDK5RAP3-228ENST00000583363 ZFP2Q6ZN57 461 aa11.57□□□□□ -0.56
CDK5RAP3-228ENST00000583363 TMEM136Q6ZRR5 245 aa11.57□□□□□ -0.56
CDK5RAP3-228ENST00000583363 C11orf45Q8TAV5 145 aa11.57□□□□□ -0.56
CDK5RAP3-228ENST00000583363 ZNF479Q96JC4 524 aa11.57□□□□□ -0.56
CDK5RAP3-228ENST00000583363 GNB1LQ9BYB4 327 aa11.57□□□□□ -0.56
CDK5RAP3-228ENST00000583363 DPH3P1Q9H4G8 78 aa11.57□□□□□ -0.56
CDK5RAP3-228ENST00000583363 IGHV3-53P01767 116 aa11.56□□□□□ -0.56
CDK5RAP3-228ENST00000583363 RAB4BP61018 213 aa11.56□□□□□ -0.56
CDK5RAP3-228ENST00000583363 FAM104BQ5XKR9 115 aa11.56□□□□□ -0.56
CDK5RAP3-228ENST00000583363 RNF185Q96GF1 192 aa11.56□□□□□ -0.56
CDK5RAP3-228ENST00000583363 EDA2RQ9HAV5 297 aa11.56□□□□□ -0.56
CDK5RAP3-228ENST00000583363 NACAE9PAV3 2078 aa11.55□□□□□ -0.56
CDK5RAP3-228ENST00000583363 IGHV3-73A0A0B4J1V6 119 aa11.55□□□□□ -0.56
CDK5RAP3-228ENST00000583363 RHODO00212 210 aa11.55□□□□□ -0.56
CDK5RAP3-228ENST00000583363 RAB4AP20338 218 aa11.55□□□□□ -0.56
CDK5RAP3-228ENST00000583363 NANOS2P60321 138 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP3-228ENST00000583363 FAM74A4Q5TZK3 123 aa11.55□□□□□ -0.56
CDK5RAP3-228ENST00000583363 AMN1Q8IY45 258 aa11.55□□□□□ -0.56
CDK5RAP3-228ENST00000583363 LYSTQ99698 3801 aa11.55□□□□□ -0.56
CDK5RAP3-228ENST00000583363 FHL2Q14192 279 aa11.54□□□□□ -0.56
CDK5RAP3-228ENST00000583363 STARD9Q9P2P6 4700 aa11.53□□□□□ -0.56
CDK5RAP3-228ENST00000583363 ATP5G1P05496 136 aa11.53□□□□□ -0.56
CDK5RAP3-228ENST00000583363 Q6ZSN1 163 aa11.53□□□□□ -0.56
CDK5RAP3-228ENST00000583363 F5H697 171 aa11.52□□□□□ -0.57
CDK5RAP3-228ENST00000583363 HLA-DQA1P01909 254 aa11.52□□□□□ -0.57
CDK5RAP3-228ENST00000583363 MT-ND6P03923 174 aa11.52□□□□□ -0.57
CDK5RAP3-228ENST00000583363 MGPP08493 103 aa11.52□□□□□ -0.57
CDK5RAP3-228ENST00000583363 RAB5AP20339 215 aa11.52□□□□□ -0.57
CDK5RAP3-228ENST00000583363 HOXA5P20719 270 aa11.52□□□□□ -0.57
CDK5RAP3-228ENST00000583363 MRPL51Q4U2R6 128 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-228ENST00000583363 Q6ZTC4 211 aa11.52□□□□□ -0.57
CDK5RAP3-228ENST00000583363 TRAPPC1Q9Y5R8 145 aa11.52□□□□□ -0.57
CDK5RAP3-228ENST00000583363 TRGV4A0A0C4DH28 118 aa11.51□□□□□ -0.57
CDK5RAP3-228ENST00000583363 LCE6AA0A183 80 aa11.51□□□□□ -0.57
CDK5RAP3-228ENST00000583363 APCSP02743 223 aa11.51□□□□□ -0.57
CDK5RAP3-228ENST00000583363 GATA1P15976 413 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-228ENST00000583363 SLAQ13239 276 aa11.51□□□□□ -0.57
CDK5RAP3-228ENST00000583363 FRZBQ92765 325 aa11.51□□□□□ -0.57
CDK5RAP3-228ENST00000583363 MRPL18Q9H0U6 180 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-228ENST00000583363 CSMD3Q7Z407 3707 aa11.5□□□□□ -0.57
CDK5RAP3-228ENST00000583363 RPS10P46783 165 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-228ENST00000583363 ZNF56Q15929 161 aa11.5□□□□□ -0.57
CDK5RAP3-228ENST00000583363 SUMO4Q6EEV6 95 aa11.5□□□□□ -0.57
CDK5RAP3-228ENST00000583363 HHLA3Q9XRX5 114 aa11.5□□□□□ -0.57
CDK5RAP3-228ENST00000583363 F5H768 121 aa11.49□□□□□ -0.57
CDK5RAP3-228ENST00000583363 M0QY20 66 aa11.49□□□□□ -0.57
CDK5RAP3-228ENST00000583363 HTN3P15516 51 aa11.49□□□□□ -0.57
CDK5RAP3-228ENST00000583363 FABP9Q0Z7S8 132 aa11.49□□□□□ -0.57
CDK5RAP3-228ENST00000583363 MRAP2Q96G30 205 aa11.49□□□□□ -0.57
CDK5RAP3-228ENST00000583363 HYDINQ4G0P3 5121 aa11.48□□□□□ -0.57
CDK5RAP3-228ENST00000583363 TRAV26-2A0A0B4J265 109 aa11.48□□□□□ -0.57
CDK5RAP3-228ENST00000583363 TRBV6-4A0A1B0GX49 114 aa11.48□□□□□ -0.57
CDK5RAP3-228ENST00000583363 GAS8-AS1O95177 125 aa11.48□□□□□ -0.57
CDK5RAP3-228ENST00000583363 CRYBA4P53673 196 aa11.48□□□□□ -0.57
CDK5RAP3-228ENST00000583363 KIAA1644Q3SXP7 199 aa11.48□□□□□ -0.57
CDK5RAP3-228ENST00000583363 SLC25A29Q8N8R3 303 aa11.48□□□□□ -0.57
CDK5RAP3-228ENST00000583363 PRO0255Q9UI72 69 aa11.48□□□□□ -0.57
CDK5RAP3-228ENST00000583363 DEFB131BA0A096LNP1 70 aa11.47□□□□□ -0.57
CDK5RAP3-228ENST00000583363 SMKR1H3BMG3 65 aa11.47□□□□□ -0.57
CDK5RAP3-228ENST00000583363 PPBPP02775 128 aa11.47□□□□□ -0.57
CDK5RAP3-228ENST00000583363 CKS2P33552 79 aa11.47□□□□□ -0.57
CDK5RAP3-228ENST00000583363 ZFAND6Q6FIF0 208 aa11.47□□□□□ -0.57
CDK5RAP3-228ENST00000583363 TRAV10A0A0B4J240 114 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms