RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 Q8N1Y9 231 aa16.74■□□□□ 0.27
CCDC47-204ENST00000582252 SMIM2Q9BVW6 85 aa16.74■□□□□ 0.27
CCDC47-204ENST00000582252 IGLL1P15814 213 aa16.73■□□□□ 0.27
CCDC47-204ENST00000582252 SUMO2P61956 95 aaKnown RBP16.73■□□□□ 0.27
CCDC47-204ENST00000582252 MAJINQ3KP22 176 aa16.73■□□□□ 0.27
CCDC47-204ENST00000582252 FXYD7P58549 80 aa16.72■□□□□ 0.27
CCDC47-204ENST00000582252 RASL10AQ92737 203 aa16.72■□□□□ 0.27
CCDC47-204ENST00000582252 HIST2H2BDQ6DRA6 164 aa16.71■□□□□ 0.27
CCDC47-204ENST00000582252 TMEM158Q8WZ71 300 aa16.71■□□□□ 0.27
CCDC47-204ENST00000582252 CLUHP3Q96NS8 147 aa16.71■□□□□ 0.27
CCDC47-204ENST00000582252 ZNF256Q9Y2P7 627 aaPredicted RBP16.71■□□□□ 0.27
CCDC47-204ENST00000582252 KIF25-AS1Q9Y6Z4 181 aa16.71■□□□□ 0.27
CCDC47-204ENST00000582252 CBY3A6NI87 242 aa16.7■□□□□ 0.26
CCDC47-204ENST00000582252 ATP5LO75964 103 aa16.7■□□□□ 0.26
CCDC47-204ENST00000582252 ORMDL2Q53FV1 153 aa16.7■□□□□ 0.26
CCDC47-204ENST00000582252 Q6ZN92 141 aa16.7■□□□□ 0.26
CCDC47-204ENST00000582252 C2orf88Q9BSF0 95 aa16.7■□□□□ 0.26
CCDC47-204ENST00000582252 GOLT1BQ9Y3E0 138 aa16.7■□□□□ 0.26
CCDC47-204ENST00000582252 HNRNPA3P51991 378 aaKnown RBP16.7■□□□□ 0.26
CCDC47-204ENST00000582252 CMC4P56277 68 aaPredicted RBP16.7■□□□□ 0.26
CCDC47-204ENST00000582252 MDFICQ9P1T7 246 aa16.7■□□□□ 0.26
CCDC47-204ENST00000582252 MUC4Q99102 2169 aa16.69■□□□□ 0.26
CCDC47-204ENST00000582252 TENM1Q9UKZ4 2725 aa16.69■□□□□ 0.26
CCDC47-204ENST00000582252 AGRNO00468 2067 aa16.69■□□□□ 0.26
CCDC47-204ENST00000582252 hDV102S1A0JD36 115 aa16.67■□□□□ 0.26
CCDC47-204ENST00000582252 RPL32P62910 135 aaKnown RBP16.67■□□□□ 0.26
CCDC47-204ENST00000582252 NDUFA11Q86Y39 141 aa16.67■□□□□ 0.26
CCDC47-204ENST00000582252 MCRIP2Q9BUT9 160 aaKnown RBP16.67■□□□□ 0.26
CCDC47-204ENST00000582252 LINC00315P59091 139 aa16.67■□□□□ 0.26
CCDC47-204ENST00000582252 KRTAP10-3P60369 221 aa16.67■□□□□ 0.26
CCDC47-204ENST00000582252 RPL39LQ96EH5 51 aaKnown RBP16.67■□□□□ 0.26
CCDC47-204ENST00000582252 SNHG12Q9BXW3 62 aa16.67■□□□□ 0.26
CCDC47-204ENST00000582252 RBMY1BA6NDE4 496 aaKnown RBP16.66■□□□□ 0.26
CCDC47-204ENST00000582252 RBMY1EA6NEQ0 496 aaKnown RBP16.66■□□□□ 0.26
CCDC47-204ENST00000582252 TCAPO15273 167 aa16.66■□□□□ 0.26
CCDC47-204ENST00000582252 NUDT3O95989 172 aa16.66■□□□□ 0.26
CCDC47-204ENST00000582252 RBMY1DP0C7P1 496 aaKnown RBP16.66■□□□□ 0.26
CCDC47-204ENST00000582252 C18orf15Q96N68 181 aa16.66■□□□□ 0.26
CCDC47-204ENST00000582252 PMCHL2Q9BQD1 86 aa16.66■□□□□ 0.26
CCDC47-204ENST00000582252 ADARB2-AS1A8MUL3 147 aa16.65■□□□□ 0.26
CCDC47-204ENST00000582252 OR11H12B2RN74 326 aa16.65■□□□□ 0.26
CCDC47-204ENST00000582252 INSP01308 110 aa16.65■□□□□ 0.26
CCDC47-204ENST00000582252 ZNF124Q15973 351 aa16.65■□□□□ 0.26
CCDC47-204ENST00000582252 LINC00467Q9BRT7 94 aa16.65■□□□□ 0.26
CCDC47-204ENST00000582252 F5H697 171 aa16.65■□□□□ 0.26
CCDC47-204ENST00000582252 EREGO14944 169 aa16.65■□□□□ 0.26
CCDC47-204ENST00000582252 G0S2P27469 103 aa16.65■□□□□ 0.26
CCDC47-204ENST00000582252 KRTAP24-1Q3LI83 254 aa16.65■□□□□ 0.26
CCDC47-204ENST00000582252 SUMO4Q6EEV6 95 aa16.65■□□□□ 0.26
CCDC47-204ENST00000582252 STHQ8IWL8 128 aa16.65■□□□□ 0.26
CCDC47-204ENST00000582252 ZNF415Q09FC8 603 aa16.64■□□□□ 0.25
CCDC47-204ENST00000582252 NSUN5P1Q3KNT7 163 aa16.64■□□□□ 0.25
CCDC47-204ENST00000582252 PRIMA1Q86XR5 153 aa16.64■□□□□ 0.25
CCDC47-204ENST00000582252 A0A087WWL8 130 aa16.63■□□□□ 0.25
CCDC47-204ENST00000582252 PRSS1P07477 247 aa16.63■□□□□ 0.25
CCDC47-204ENST00000582252 RBMY1A1P0DJD3 496 aaKnown RBP16.63■□□□□ 0.25
CCDC47-204ENST00000582252 RBMY1CP0DJD4 496 aa16.63■□□□□ 0.25
CCDC47-204ENST00000582252 RBMY1FQ15415 496 aaKnown RBP16.63■□□□□ 0.25
CCDC47-204ENST00000582252 ODF3L2Q3SX64 289 aa16.63■□□□□ 0.25
CCDC47-204ENST00000582252 ZNF876PQ49A33 203 aa16.63■□□□□ 0.25
CCDC47-204ENST00000582252 JPT2Q9H910 190 aa16.63■□□□□ 0.25
CCDC47-204ENST00000582252 MRPS16Q9Y3D3 137 aaKnown RBP16.63■□□□□ 0.25
CCDC47-204ENST00000582252 LINC01549A6NIU2 74 aa16.62■□□□□ 0.25
CCDC47-204ENST00000582252 SAP30O75446 220 aa16.62■□□□□ 0.25
CCDC47-204ENST00000582252 PIK3CD-AS1Q5SR53 167 aa16.62■□□□□ 0.25
CCDC47-204ENST00000582252 FAM74A4Q5TZK3 123 aa16.62■□□□□ 0.25
CCDC47-204ENST00000582252 SLC25A34Q6PIV7 304 aa16.62■□□□□ 0.25
CCDC47-204ENST00000582252 CSTL1Q9H114 145 aa16.62■□□□□ 0.25
CCDC47-204ENST00000582252 ZNF56Q15929 161 aa16.61■□□□□ 0.25
CCDC47-204ENST00000582252 TRBV6-5A0A0K0K1A5 114 aa16.6■□□□□ 0.25
CCDC47-204ENST00000582252 NUTF2P61970 127 aaKnown RBP16.6■□□□□ 0.25
CCDC47-204ENST00000582252 PTH2Q96A98 100 aa16.6■□□□□ 0.25
CCDC47-204ENST00000582252 LINC01587Q99440 93 aa16.6■□□□□ 0.25
CCDC47-204ENST00000582252 CITED1Q99966 193 aa16.6■□□□□ 0.25
CCDC47-204ENST00000582252 VCYO14598 125 aa16.59■□□□□ 0.25
CCDC47-204ENST00000582252 CRYGDP07320 174 aa16.59■□□□□ 0.25
CCDC47-204ENST00000582252 TOMM6Q96B49 74 aa16.59■□□□□ 0.25
CCDC47-204ENST00000582252 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.59■□□□□ 0.25
CCDC47-204ENST00000582252 HTN1P15515 57 aa16.59■□□□□ 0.25
CCDC47-204ENST00000582252 TRPT1Q86TN4 253 aaKnown RBP16.59■□□□□ 0.25
CCDC47-204ENST00000582252 FAM110AQ9BQ89 295 aa16.59■□□□□ 0.25
CCDC47-204ENST00000582252 M0R2P5 195 aa16.58■□□□□ 0.24
CCDC47-204ENST00000582252 ODF1Q14990 250 aa16.58■□□□□ 0.24
CCDC47-204ENST00000582252 KIR2DL4Q99706 377 aa16.58■□□□□ 0.24
CCDC47-204ENST00000582252 IGLV1-51P01701 117 aa16.57■□□□□ 0.24
CCDC47-204ENST00000582252 POLR2KP53803 58 aaKnown RBP16.57■□□□□ 0.24
CCDC47-204ENST00000582252 SPXQ9BT56 116 aa16.57■□□□□ 0.24
CCDC47-204ENST00000582252 SORL1Q92673 2214 aa16.56■□□□□ 0.24
CCDC47-204ENST00000582252 A8MWV9 139 aa16.56■□□□□ 0.24
CCDC47-204ENST00000582252 H7C1H1 209 aa16.56■□□□□ 0.24
CCDC47-204ENST00000582252 SCGB3A1Q96QR1 104 aa16.56■□□□□ 0.24
CCDC47-204ENST00000582252 COL6A5A8TX70 2615 aa16.56■□□□□ 0.24
CCDC47-204ENST00000582252 COX8AP10176 69 aa16.56■□□□□ 0.24
CCDC47-204ENST00000582252 ZMAT4Q9H898 229 aa16.56■□□□□ 0.24
CCDC47-204ENST00000582252 DKK2Q9UBU2 259 aa16.56■□□□□ 0.24
CCDC47-204ENST00000582252 STAB1Q9NY15 2570 aa16.55■□□□□ 0.24
CCDC47-204ENST00000582252 FBN1P35555 2871 aaKnown RBP16.54■□□□□ 0.24
CCDC47-204ENST00000582252 SDHAF1A6NFY7 115 aa16.54■□□□□ 0.24
CCDC47-204ENST00000582252 M0QY20 66 aa16.54■□□□□ 0.24
CCDC47-204ENST00000582252 DPM2O94777 84 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms