RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 AMTNQ6UX39 209 aa5.82□□□□□ -1.48
RFFL-207ENST00000580569 LINC00173Q6ZV60 143 aa5.82□□□□□ -1.48
RFFL-207ENST00000580569 OR11H1Q8NG94 326 aa5.82□□□□□ -1.48
RFFL-207ENST00000580569 PRELID3AQ96N28 172 aa5.82□□□□□ -1.48
RFFL-207ENST00000580569 WWC2-AS2Q96NR7 200 aa5.82□□□□□ -1.48
RFFL-207ENST00000580569 C20orf144Q9BQM9 153 aa5.82□□□□□ -1.48
RFFL-207ENST00000580569 IGLV2-18A0A075B6J9 118 aa5.81□□□□□ -1.48
RFFL-207ENST00000580569 TSTD3H0UI37 97 aa5.81□□□□□ -1.48
RFFL-207ENST00000580569 SMKR1H3BMG3 65 aa5.81□□□□□ -1.48
RFFL-207ENST00000580569 H3BVH4 76 aa5.81□□□□□ -1.48
RFFL-207ENST00000580569 PPBPP02775 128 aa5.81□□□□□ -1.48
RFFL-207ENST00000580569 EVI2AP22794 236 aa5.81□□□□□ -1.48
RFFL-207ENST00000580569 DDTP30046 118 aa5.81□□□□□ -1.48
RFFL-207ENST00000580569 IFI27P40305 119 aaPredicted RBP5.81□□□□□ -1.48
RFFL-207ENST00000580569 SSTP61278 116 aa5.81□□□□□ -1.48
RFFL-207ENST00000580569 PMCHL1Q16048 86 aa5.81□□□□□ -1.48
RFFL-207ENST00000580569 POM121L12Q8N7R1 296 aa5.81□□□□□ -1.48
RFFL-207ENST00000580569 NRACQ8N912 160 aa5.81□□□□□ -1.48
RFFL-207ENST00000580569 OR9G4Q8NGQ1 327 aa5.81□□□□□ -1.48
RFFL-207ENST00000580569 OR1N2Q8NGR9 330 aa5.81□□□□□ -1.48
RFFL-207ENST00000580569 DLX4Q92988 240 aaPredicted RBP5.81□□□□□ -1.48
RFFL-207ENST00000580569 C14orf144Q96I85 54 aa5.81□□□□□ -1.48
RFFL-207ENST00000580569 LAMTOR2Q9Y2Q5 125 aa5.81□□□□□ -1.48
RFFL-207ENST00000580569 GNRH2O43555 120 aa5.8□□□□□ -1.48
RFFL-207ENST00000580569 NCR2O95944 276 aa5.8□□□□□ -1.48
RFFL-207ENST00000580569 CKS2P33552 79 aa5.8□□□□□ -1.48
RFFL-207ENST00000580569 RNASE4P34096 147 aaKnown RBP5.8□□□□□ -1.48
RFFL-207ENST00000580569 TFPI2P48307 235 aa5.8□□□□□ -1.48
RFFL-207ENST00000580569 DEFB114Q30KQ6 69 aa5.8□□□□□ -1.48
RFFL-207ENST00000580569 PSMG4Q5JS54 123 aa5.8□□□□□ -1.48
RFFL-207ENST00000580569 FOXI2Q6ZQN5 318 aa5.8□□□□□ -1.48
RFFL-207ENST00000580569 KLHL30-AS1Q8NEE0 82 aa5.8□□□□□ -1.48
RFFL-207ENST00000580569 DUX3Q96PT4 197 aa5.8□□□□□ -1.48
RFFL-207ENST00000580569 KIF25-AS1Q9Y6Z4 181 aa5.8□□□□□ -1.48
RFFL-207ENST00000580569 CSMD3Q7Z407 3707 aa5.79□□□□□ -1.48
RFFL-207ENST00000580569 STAB2Q8WWQ8 2551 aa5.79□□□□□ -1.48
RFFL-207ENST00000580569 C7orf71A4D174 169 aa5.79□□□□□ -1.48
RFFL-207ENST00000580569 SYS1-DBNDD2H3BUS1 97 aa5.79□□□□□ -1.48
RFFL-207ENST00000580569 DUSP14O95147 198 aaKnown RBP5.79□□□□□ -1.48
RFFL-207ENST00000580569 LEPROTL1O95214 131 aa5.79□□□□□ -1.48
RFFL-207ENST00000580569 CD28P10747 220 aa5.79□□□□□ -1.48
RFFL-207ENST00000580569 GATA1P15976 413 aaPredicted RBP5.79□□□□□ -1.48
RFFL-207ENST00000580569 LEPP41159 167 aa5.79□□□□□ -1.48
RFFL-207ENST00000580569 LINC00315P59091 139 aa5.79□□□□□ -1.48
RFFL-207ENST00000580569 SNRPD3P62318 126 aaKnown RBP5.79□□□□□ -1.48
RFFL-207ENST00000580569 PRSS3P2Q8NHM4 247 aa5.79□□□□□ -1.48
RFFL-207ENST00000580569 DPF1Q92782 380 aa5.79□□□□□ -1.48
RFFL-207ENST00000580569 C9orf85Q96MD7 179 aa5.79□□□□□ -1.48
RFFL-207ENST00000580569 NDUFAF3Q9BU61 184 aa5.79□□□□□ -1.48
RFFL-207ENST00000580569 TMEM70Q9BUB7 260 aa5.79□□□□□ -1.48
RFFL-207ENST00000580569 ZNF256Q9Y2P7 627 aaPredicted RBP5.79□□□□□ -1.48
RFFL-207ENST00000580569 TENM2Q9NT68 2774 aa5.78□□□□□ -1.48
RFFL-207ENST00000580569 LOC389332A0A1B0GUA5 103 aa5.78□□□□□ -1.48
RFFL-207ENST00000580569 RBMY1BA6NDE4 496 aaKnown RBP5.78□□□□□ -1.48
RFFL-207ENST00000580569 RBMY1EA6NEQ0 496 aaKnown RBP5.78□□□□□ -1.48
RFFL-207ENST00000580569 RBMY1DP0C7P1 496 aaKnown RBP5.78□□□□□ -1.48
RFFL-207ENST00000580569 ASIPP42127 132 aa5.78□□□□□ -1.48
RFFL-207ENST00000580569 LINC01545Q5VT33 79 aa5.78□□□□□ -1.48
RFFL-207ENST00000580569 FA2HQ7L5A8 372 aa5.78□□□□□ -1.48
RFFL-207ENST00000580569 TMEM61Q8N0U2 210 aa5.78□□□□□ -1.48
RFFL-207ENST00000580569 VAMP8Q9BV40 100 aa5.78□□□□□ -1.48
RFFL-207ENST00000580569 TRAV12-3A0A0B4J271 114 aa5.77□□□□□ -1.49
RFFL-207ENST00000580569 IGHV3-16A0A0C4DH30 117 aa5.77□□□□□ -1.49
RFFL-207ENST00000580569 H3BMM0 161 aa5.77□□□□□ -1.49
RFFL-207ENST00000580569 RBMY1A1P0DJD3 496 aaKnown RBP5.77□□□□□ -1.49
RFFL-207ENST00000580569 RBMY1CP0DJD4 496 aa5.77□□□□□ -1.49
RFFL-207ENST00000580569 HLA-DRB4P13762 266 aa5.77□□□□□ -1.49
RFFL-207ENST00000580569 CDKN1BP46527 198 aa5.77□□□□□ -1.49
RFFL-207ENST00000580569 RBMY1FQ15415 496 aaKnown RBP5.77□□□□□ -1.49
RFFL-207ENST00000580569 SERTAD4-AS1Q5TG53 156 aa5.77□□□□□ -1.49
RFFL-207ENST00000580569 SPANXN1Q5VSR9 72 aa5.77□□□□□ -1.49
RFFL-207ENST00000580569 PET117Q6UWS5 81 aa5.77□□□□□ -1.49
RFFL-207ENST00000580569 Q8N8P6 123 aa5.77□□□□□ -1.49
RFFL-207ENST00000580569 OR2K2Q8NGT1 345 aa5.77□□□□□ -1.49
RFFL-207ENST00000580569 MRAP2Q96G30 205 aa5.77□□□□□ -1.49
RFFL-207ENST00000580569 CITED2Q99967 270 aaPredicted RBP5.77□□□□□ -1.49
RFFL-207ENST00000580569 MIEN1Q9BRT3 115 aa5.77□□□□□ -1.49
RFFL-207ENST00000580569 MAP1LC3AQ9H492 121 aa5.77□□□□□ -1.49
RFFL-207ENST00000580569 NXT2Q9NPJ8 142 aaKnown RBP5.77□□□□□ -1.49
RFFL-207ENST00000580569 HSPB8Q9UJY1 196 aa5.77□□□□□ -1.49
RFFL-207ENST00000580569 PAM16Q9Y3D7 125 aa5.77□□□□□ -1.49
RFFL-207ENST00000580569 HLA-DRB4X5D2U9 266 aa5.77□□□□□ -1.49
RFFL-207ENST00000580569 TRAV12-2A0A075B6T6 113 aa5.76□□□□□ -1.49
RFFL-207ENST00000580569 TRAV9-2A0A087WT02 112 aa5.76□□□□□ -1.49
RFFL-207ENST00000580569 TRAV25A0A0B4J276 109 aa5.76□□□□□ -1.49
RFFL-207ENST00000580569 K7EIL1 84 aa5.76□□□□□ -1.49
RFFL-207ENST00000580569 M0R381 172 aa5.76□□□□□ -1.49
RFFL-207ENST00000580569 CCL24O00175 119 aa5.76□□□□□ -1.49
RFFL-207ENST00000580569 PRYO14603 147 aa5.76□□□□□ -1.49
RFFL-207ENST00000580569 TSPOP30536 169 aa5.76□□□□□ -1.49
RFFL-207ENST00000580569 DEFB131AP59861 70 aa5.76□□□□□ -1.49
RFFL-207ENST00000580569 SPINK13Q1W4C9 94 aa5.76□□□□□ -1.49
RFFL-207ENST00000580569 MAJINQ3KP22 176 aa5.76□□□□□ -1.49
RFFL-207ENST00000580569 SPATA45Q537H7 98 aa5.76□□□□□ -1.49
RFFL-207ENST00000580569 FAM159AQ6UWV7 190 aa5.76□□□□□ -1.49
RFFL-207ENST00000580569 SMIM15Q7Z3B0 74 aa5.76□□□□□ -1.49
RFFL-207ENST00000580569 RASL10AQ92737 203 aa5.76□□□□□ -1.49
RFFL-207ENST00000580569 DPH3P1Q9H4G8 78 aa5.76□□□□□ -1.49
RFFL-207ENST00000580569 MAP6D1Q9H9H5 199 aa5.76□□□□□ -1.49
RFFL-207ENST00000580569 PHLDA3Q9Y5J5 127 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms