RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 SYT8Q8NBV8 401 aa10.8□□□□□ -0.68
CDK5RAP3-218ENST00000580391 MRAP2Q96G30 205 aa10.8□□□□□ -0.68
CDK5RAP3-218ENST00000580391 MAP1LC3AQ9H492 121 aa10.8□□□□□ -0.68
CDK5RAP3-218ENST00000580391 STAB1Q9NY15 2570 aa10.79□□□□□ -0.68
CDK5RAP3-218ENST00000580391 ZNF415Q09FC8 603 aa10.79□□□□□ -0.68
CDK5RAP3-218ENST00000580391 LINC00467Q9BRT7 94 aa10.79□□□□□ -0.68
CDK5RAP3-218ENST00000580391 TMEM208Q9BTX3 173 aa10.79□□□□□ -0.68
CDK5RAP3-218ENST00000580391 KRTDAPP60985 99 aa10.79□□□□□ -0.68
CDK5RAP3-218ENST00000580391 ZNF876PQ49A33 203 aa10.79□□□□□ -0.68
CDK5RAP3-218ENST00000580391 C11orf72Q8NBR9 251 aa10.79□□□□□ -0.68
CDK5RAP3-218ENST00000580391 GSN-AS1Q9NRJ2 163 aa10.79□□□□□ -0.68
CDK5RAP3-218ENST00000580391 SMIM17P0DL12 118 aa10.78□□□□□ -0.68
CDK5RAP3-218ENST00000580391 IGLL1P15814 213 aa10.78□□□□□ -0.68
CDK5RAP3-218ENST00000580391 FAM74A4Q5TZK3 123 aa10.78□□□□□ -0.68
CDK5RAP3-218ENST00000580391 RASL10AQ92737 203 aa10.78□□□□□ -0.68
CDK5RAP3-218ENST00000580391 RPL39LQ96EH5 51 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-218ENST00000580391 C3orf79P0CE67 100 aa10.77□□□□□ -0.68
CDK5RAP3-218ENST00000580391 LINC00173Q6ZV60 143 aa10.77□□□□□ -0.68
CDK5RAP3-218ENST00000580391 GTSCR1Q86UQ5 136 aa10.77□□□□□ -0.68
CDK5RAP3-218ENST00000580391 POM121L12Q8N7R1 296 aa10.77□□□□□ -0.68
CDK5RAP3-218ENST00000580391 A0A096LNJ9 63 aa10.77□□□□□ -0.69
CDK5RAP3-218ENST00000580391 SCGB1D1O95968 90 aa10.77□□□□□ -0.69
CDK5RAP3-218ENST00000580391 AZU1P20160 251 aa10.77□□□□□ -0.69
CDK5RAP3-218ENST00000580391 ZNF747Q9BV97 191 aa10.77□□□□□ -0.69
CDK5RAP3-218ENST00000580391 CMYA5Q8N3K9 4069 aa10.77□□□□□ -0.69
CDK5RAP3-218ENST00000580391 SUMO4Q6EEV6 95 aa10.76□□□□□ -0.69
CDK5RAP3-218ENST00000580391 WFDC9Q8NEX5 89 aa10.76□□□□□ -0.69
CDK5RAP3-218ENST00000580391 IGLV2-18A0A075B6J9 118 aa10.76□□□□□ -0.69
CDK5RAP3-218ENST00000580391 CRYGDP07320 174 aa10.76□□□□□ -0.69
CDK5RAP3-218ENST00000580391 Q8N976 141 aa10.76□□□□□ -0.69
CDK5RAP3-218ENST00000580391 MCRIP2Q9BUT9 160 aaKnown RBP10.76□□□□□ -0.69
CDK5RAP3-218ENST00000580391 M0R2P5 195 aa10.75□□□□□ -0.69
CDK5RAP3-218ENST00000580391 LEPROTL1O95214 131 aa10.75□□□□□ -0.69
CDK5RAP3-218ENST00000580391 NXT2Q9NPJ8 142 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-218ENST00000580391 F5H697 171 aa10.74□□□□□ -0.69
CDK5RAP3-218ENST00000580391 ZNF56Q15929 161 aa10.74□□□□□ -0.69
CDK5RAP3-218ENST00000580391 MORN3Q6PF18 240 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-218ENST00000580391 Q8N8P6 123 aa10.74□□□□□ -0.69
CDK5RAP3-218ENST00000580391 PRSS47A8MTI9 375 aa10.74□□□□□ -0.69
CDK5RAP3-218ENST00000580391 C3orf56Q8N813 242 aa10.74□□□□□ -0.69
CDK5RAP3-218ENST00000580391 CSNK1G2-AS1Q8NCQ2 148 aa10.74□□□□□ -0.69
CDK5RAP3-218ENST00000580391 IL17DQ8TAD2 202 aa10.74□□□□□ -0.69
CDK5RAP3-218ENST00000580391 RNASE8Q8TDE3 154 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-218ENST00000580391 SMIM2Q9BVW6 85 aa10.74□□□□□ -0.69
CDK5RAP3-218ENST00000580391 MRPL16Q9NX20 251 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-218ENST00000580391 GOLT1BQ9Y3E0 138 aa10.74□□□□□ -0.69
CDK5RAP3-218ENST00000580391 LINC01546A6NGU7 62 aa10.73□□□□□ -0.69
CDK5RAP3-218ENST00000580391 SUMO2P61956 95 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-218ENST00000580391 C1QTNF4Q9BXJ3 329 aa10.73□□□□□ -0.69
CDK5RAP3-218ENST00000580391 SPATA12Q7Z6I5 190 aa10.72□□□□□ -0.69
CDK5RAP3-218ENST00000580391 HBDP02042 147 aa10.72□□□□□ -0.69
CDK5RAP3-218ENST00000580391 TMEM263Q8WUH6 116 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-218ENST00000580391 SPXQ9BT56 116 aa10.72□□□□□ -0.69
CDK5RAP3-218ENST00000580391 IGHV3-73A0A0B4J1V6 119 aa10.71□□□□□ -0.69
CDK5RAP3-218ENST00000580391 TCAPO15273 167 aa10.71□□□□□ -0.69
CDK5RAP3-218ENST00000580391 WIPF1O43516 503 aa10.71□□□□□ -0.69
CDK5RAP3-218ENST00000580391 C12orf54Q6X4T0 127 aa10.71□□□□□ -0.69
CDK5RAP3-218ENST00000580391 SHISA2Q6UWI4 295 aa10.7□□□□□ -0.7
CDK5RAP3-218ENST00000580391 PTH2Q96A98 100 aa10.7□□□□□ -0.7
CDK5RAP3-218ENST00000580391 C20orf78Q9BR46 151 aa10.7□□□□□ -0.7
CDK5RAP3-218ENST00000580391 TMEM70Q9BUB7 260 aa10.7□□□□□ -0.7
CDK5RAP3-218ENST00000580391 HSPB8Q9UJY1 196 aa10.7□□□□□ -0.7
CDK5RAP3-218ENST00000580391 PIK3CD-AS1Q5SR53 167 aa10.7□□□□□ -0.7
CDK5RAP3-218ENST00000580391 ZNF705AQ6ZN79 300 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-218ENST00000580391 NEGR1Q7Z3B1 354 aa10.7□□□□□ -0.7
CDK5RAP3-218ENST00000580391 CSTL1Q9H114 145 aa10.7□□□□□ -0.7
CDK5RAP3-218ENST00000580391 COL6A5A8TX70 2615 aa10.7□□□□□ -0.7
CDK5RAP3-218ENST00000580391 A8MWV9 139 aa10.69□□□□□ -0.7
CDK5RAP3-218ENST00000580391 M0QY20 66 aa10.69□□□□□ -0.7
CDK5RAP3-218ENST00000580391 CFAP126Q5VTH2 177 aa10.69□□□□□ -0.7
CDK5RAP3-218ENST00000580391 UFSP1Q6NVU6 142 aa10.69□□□□□ -0.7
CDK5RAP3-218ENST00000580391 TEX43Q6ZNM6 134 aa10.69□□□□□ -0.7
CDK5RAP3-218ENST00000580391 TMEM158Q8WZ71 300 aa10.69□□□□□ -0.7
CDK5RAP3-218ENST00000580391 PLAC8L1A1L4L8 177 aa10.68□□□□□ -0.7
CDK5RAP3-218ENST00000580391 SYS1-DBNDD2H3BUS1 97 aa10.68□□□□□ -0.7
CDK5RAP3-218ENST00000580391 PPP1R17O96001 155 aa10.68□□□□□ -0.7
CDK5RAP3-218ENST00000580391 PKD1L1Q8TDX9 2849 aa10.68□□□□□ -0.7
CDK5RAP3-218ENST00000580391 TRGV1A0A0A0MS02 117 aa10.68□□□□□ -0.7
CDK5RAP3-218ENST00000580391 H0Y8G0 127 aa10.68□□□□□ -0.7
CDK5RAP3-218ENST00000580391 FCER1GP30273 86 aa10.68□□□□□ -0.7
CDK5RAP3-218ENST00000580391 LAGE3Q14657 143 aa10.68□□□□□ -0.7
CDK5RAP3-218ENST00000580391 C16orf74Q96GX8 76 aa10.68□□□□□ -0.7
CDK5RAP3-218ENST00000580391 ST20Q9HBF5 79 aa10.68□□□□□ -0.7
CDK5RAP3-218ENST00000580391 RRN3P1Q2M238 152 aa10.67□□□□□ -0.7
CDK5RAP3-218ENST00000580391 OXLD1Q5BKU9 147 aa10.67□□□□□ -0.7
CDK5RAP3-218ENST00000580391 Q6ZTI0 123 aa10.67□□□□□ -0.7
CDK5RAP3-218ENST00000580391 MAP1LC3CQ9BXW4 147 aa10.67□□□□□ -0.7
CDK5RAP3-218ENST00000580391 PRO1933Q9H354 126 aa10.67□□□□□ -0.7
CDK5RAP3-218ENST00000580391 P0DMU3 169 aa10.66□□□□□ -0.7
CDK5RAP3-218ENST00000580391 FAM231AP0DMU4 169 aa10.66□□□□□ -0.7
CDK5RAP3-218ENST00000580391 FAM231CP0DMU5 169 aa10.66□□□□□ -0.7
CDK5RAP3-218ENST00000580391 ATOH7Q8N100 152 aa10.66□□□□□ -0.7
CDK5RAP3-218ENST00000580391 ZNF664Q8N3J9 261 aa10.66□□□□□ -0.7
CDK5RAP3-218ENST00000580391 DEFB104AQ8WTQ1 72 aa10.66□□□□□ -0.7
CDK5RAP3-218ENST00000580391 TRBV6-5A0A0K0K1A5 114 aa10.66□□□□□ -0.7
CDK5RAP3-218ENST00000580391 SDHAF1A6NFY7 115 aa10.66□□□□□ -0.7
CDK5RAP3-218ENST00000580391 RS1O15537 224 aa10.66□□□□□ -0.7
CDK5RAP3-218ENST00000580391 POLR2KP53803 58 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-218ENST00000580391 C18orf15Q96N68 181 aa10.66□□□□□ -0.7
CDK5RAP3-218ENST00000580391 NOP10Q9NPE3 64 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms