RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 TYMSP04818 313 aa4.83□□□□□ -1.64
CDK5RAP3-209ENST00000578663 RPL19P84098 196 aaKnown RBP4.83□□□□□ -1.64
CDK5RAP3-209ENST00000578663 FAM162BQ5T6X4 162 aa4.83□□□□□ -1.64
CDK5RAP3-209ENST00000578663 EIF4E3Q8N5X7 224 aaKnown RBP4.83□□□□□ -1.64
CDK5RAP3-209ENST00000578663 OCC1Q8TAD7 63 aa4.83□□□□□ -1.64
CDK5RAP3-209ENST00000578663 VSIG2Q96IQ7 327 aa4.83□□□□□ -1.64
CDK5RAP3-209ENST00000578663 SMIM7Q9BQ49 75 aa4.83□□□□□ -1.64
CDK5RAP3-209ENST00000578663 LINC00467Q9BRT7 94 aa4.83□□□□□ -1.64
CDK5RAP3-209ENST00000578663 SMDT1Q9H4I9 107 aa4.83□□□□□ -1.64
CDK5RAP3-209ENST00000578663 FAM30AQ9NZY2 134 aa4.83□□□□□ -1.64
CDK5RAP3-209ENST00000578663 TNFRSF18Q9Y5U5 241 aa4.83□□□□□ -1.64
CDK5RAP3-209ENST00000578663 TMSB15BA0A087X1C1 80 aa4.82□□□□□ -1.64
CDK5RAP3-209ENST00000578663 C19orf71A6NCJ1 209 aa4.82□□□□□ -1.64
CDK5RAP3-209ENST00000578663 LRCOL1A6NCL2 159 aa4.82□□□□□ -1.64
CDK5RAP3-209ENST00000578663 M0R036 132 aa4.82□□□□□ -1.64
CDK5RAP3-209ENST00000578663 GNRH2O43555 120 aa4.82□□□□□ -1.64
CDK5RAP3-209ENST00000578663 SFTA3P0C7M3 94 aa4.82□□□□□ -1.64
CDK5RAP3-209ENST00000578663 KRTAP10-4P60372 401 aaPredicted RBP4.82□□□□□ -1.64
CDK5RAP3-209ENST00000578663 TDRG1Q3Y452 100 aa4.82□□□□□ -1.64
CDK5RAP3-209ENST00000578663 FAM159AQ6UWV7 190 aa4.82□□□□□ -1.64
CDK5RAP3-209ENST00000578663 C11orf72Q8NBR9 251 aa4.82□□□□□ -1.64
CDK5RAP3-209ENST00000578663 SMIM12Q96EX1 92 aa4.82□□□□□ -1.64
CDK5RAP3-209ENST00000578663 GSN-AS1Q9NRJ2 163 aa4.82□□□□□ -1.64
CDK5RAP3-209ENST00000578663 LY96Q9Y6Y9 160 aa4.82□□□□□ -1.64
CDK5RAP3-209ENST00000578663 TRGV11A0A075B6L2 103 aa4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 IGHV3-16A0A0C4DH30 117 aa4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 GRIFINA4D1Z8 144 aa4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 SNURFLB1AK76 121 aa4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 B4DEV8 164 aa4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 KRBOX1C9JBD0 128 aa4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 ORM1P02763 201 aa4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 ADCYAP1P18509 176 aa4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 TCL1AP56279 114 aa4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 RPL23P62829 140 aaKnown RBP4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 ZNF415Q09FC8 603 aa4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 DAZ2Q13117 558 aaKnown RBP4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 LINC01559Q495D7 138 aa4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 FAM74A3Q4VXF1 159 aa4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 UQCC3Q6UW78 93 aa4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 LINC01551Q86U37 167 aa4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 C10orf126Q8N4M7 172 aa4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 RNASE7Q9H1E1 156 aaKnown RBP4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 SDF2L1Q9HCN8 221 aa4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 ICOSQ9Y6W8 199 aa4.81□□□□□ -1.64
CDK5RAP3-209ENST00000578663 GAGE12BA1L429 117 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 TMEM218A2RU14 115 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 RS1O15537 224 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 GAGE7O76087 117 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 GAGE12FP0CL80 117 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 GAGE12GP0CL81 117 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 GAGE12IP0CL82 117 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 MT1HL1P0DM35 61 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 RNASE3P12724 160 aaKnown RBP4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 EVI2AP22794 236 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 ADIRFQ15847 76 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 TMEM241Q24JQ0 296 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 IBA57Q5T440 356 aaKnown RBP4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 Q8N814 137 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 NUDT10Q8NFP7 164 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 OR2D3Q8NGH3 330 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 ISOC2Q96AB3 205 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 NUDT11Q96G61 164 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 KCNS1Q96KK3 526 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 C9orf85Q96MD7 179 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 MRPL16Q9NX20 251 aaKnown RBP4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 NAT8Q9UHE5 227 aa4.8□□□□□ -1.64
CDK5RAP3-209ENST00000578663 H3BVH4 76 aa4.79□□□□□ -1.64
CDK5RAP3-209ENST00000578663 P01737 135 aa4.79□□□□□ -1.64
CDK5RAP3-209ENST00000578663 GZMBP10144 247 aa4.79□□□□□ -1.64
CDK5RAP3-209ENST00000578663 NDUFA5Q16718 116 aa4.79□□□□□ -1.64
CDK5RAP3-209ENST00000578663 Q6ZTI0 123 aa4.79□□□□□ -1.64
CDK5RAP3-209ENST00000578663 DAZAP1Q96EP5 407 aaKnown RBP4.79□□□□□ -1.64
CDK5RAP3-209ENST00000578663 BIN3Q9NQY0 253 aa4.79□□□□□ -1.64
CDK5RAP3-209ENST00000578663 TRGV2A0A075B6R0 118 aa4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 TRGV1A0A0A0MS02 117 aa4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 F8W036 122 aa4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 PAX4O43316 350 aa4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 PSCAO43653 123 aa4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 GATCO43716 136 aaKnown RBP4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 SPINK4O60575 86 aa4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 CXCL1P09341 107 aa4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 ARMS2P0C7Q2 107 aa4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 S100A4P26447 101 aaKnown RBP4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 SLAQ13239 276 aa4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 MRPL23Q16540 153 aaKnown RBP4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 DNLZQ5SXM8 178 aa4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 LYPD5Q6UWN5 251 aa4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 FAM231DQ6ZW35 169 aa4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 SLC7A5P1Q8MH63 180 aa4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 RPP21Q9H633 154 aaKnown RBP4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 OSTCQ9NRP0 149 aa4.78□□□□□ -1.64
CDK5RAP3-209ENST00000578663 MUC21A0A0G2JKD1 596 aa4.77□□□□□ -1.65
CDK5RAP3-209ENST00000578663 MUC21A0A140T8X8 626 aa4.77□□□□□ -1.65
CDK5RAP3-209ENST00000578663 M0R2P5 195 aa4.77□□□□□ -1.65
CDK5RAP3-209ENST00000578663 SNAI2O43623 268 aa4.77□□□□□ -1.65
CDK5RAP3-209ENST00000578663 CRYGDP07320 174 aa4.77□□□□□ -1.65
CDK5RAP3-209ENST00000578663 IGLC6P0CF74 106 aa4.77□□□□□ -1.65
CDK5RAP3-209ENST00000578663 RPS20P60866 119 aaKnown RBP4.77□□□□□ -1.65
CDK5RAP3-209ENST00000578663 SCXQ7RTU7 201 aa4.77□□□□□ -1.65
CDK5RAP3-209ENST00000578663 NEGR1Q7Z3B1 354 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms