RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 PYY3Q5JQD4 70 aa12.38□□□□□ -0.43
SREBF1-218ENST00000578469 C14orf178Q8N769 122 aaPredicted RBP12.38□□□□□ -0.43
SREBF1-218ENST00000578469 URB1-AS1Q96HZ7 61 aa12.38□□□□□ -0.43
SREBF1-218ENST00000578469 C1QTNF4Q9BXJ3 329 aa12.38□□□□□ -0.43
SREBF1-218ENST00000578469 LOC389332A0A1B0GUA5 103 aa12.37□□□□□ -0.43
SREBF1-218ENST00000578469 TNFRSF6BO95407 300 aa12.37□□□□□ -0.43
SREBF1-218ENST00000578469 MGPP08493 103 aa12.37□□□□□ -0.43
SREBF1-218ENST00000578469 JOSD1Q15040 202 aaPredicted RBP12.37□□□□□ -0.43
SREBF1-218ENST00000578469 FAM19A2Q8N3H0 131 aa12.37□□□□□ -0.43
SREBF1-218ENST00000578469 WFDC9Q8NEX5 89 aa12.37□□□□□ -0.43
SREBF1-218ENST00000578469 GSN-AS1Q9NRJ2 163 aa12.37□□□□□ -0.43
SREBF1-218ENST00000578469 AP5S1Q9NUS5 200 aa12.37□□□□□ -0.43
SREBF1-218ENST00000578469 NOTCH3Q9UM47 2321 aa12.37□□□□□ -0.43
SREBF1-218ENST00000578469 PPP1R17O96001 155 aa12.36□□□□□ -0.43
SREBF1-218ENST00000578469 RPL35AP18077 110 aaKnown RBP12.36□□□□□ -0.43
SREBF1-218ENST00000578469 NXT2Q9NPJ8 142 aaKnown RBP12.36□□□□□ -0.43
SREBF1-218ENST00000578469 GOLT1BQ9Y3E0 138 aa12.36□□□□□ -0.43
SREBF1-218ENST00000578469 IFI27P40305 119 aaPredicted RBP12.35□□□□□ -0.43
SREBF1-218ENST00000578469 ZNF876PQ49A33 203 aa12.35□□□□□ -0.43
SREBF1-218ENST00000578469 PTH2Q96A98 100 aa12.35□□□□□ -0.43
SREBF1-218ENST00000578469 SPXQ9BT56 116 aa12.35□□□□□ -0.43
SREBF1-218ENST00000578469 WFDC10AQ9H1F0 79 aa12.35□□□□□ -0.43
SREBF1-218ENST00000578469 KMT2CQ8NEZ4 4911 aaKnown RBP12.35□□□□□ -0.43
SREBF1-218ENST00000578469 PIK3CD-AS1Q5SR53 167 aa12.34□□□□□ -0.43
SREBF1-218ENST00000578469 Q6ZWC4 215 aa12.34□□□□□ -0.43
SREBF1-218ENST00000578469 C1orf158Q8N1D5 194 aa12.34□□□□□ -0.43
SREBF1-218ENST00000578469 DEFB125Q8N687 156 aa12.34□□□□□ -0.43
SREBF1-218ENST00000578469 POM121L12Q8N7R1 296 aa12.34□□□□□ -0.43
SREBF1-218ENST00000578469 NIT2Q9NQR4 276 aa12.34□□□□□ -0.43
SREBF1-218ENST00000578469 IGHV1-24A0A0C4DH33 117 aa12.33□□□□□ -0.44
SREBF1-218ENST00000578469 M0R2P5 195 aa12.33□□□□□ -0.44
SREBF1-218ENST00000578469 GATA1P15976 413 aaPredicted RBP12.33□□□□□ -0.44
SREBF1-218ENST00000578469 NRACQ8N912 160 aa12.33□□□□□ -0.44
SREBF1-218ENST00000578469 KIF25-AS1Q9Y6Z4 181 aa12.33□□□□□ -0.44
SREBF1-218ENST00000578469 IGHV3OR16-12A0A075B7B8 117 aa12.32□□□□□ -0.44
SREBF1-218ENST00000578469 TRAV26-2A0A0B4J265 109 aa12.32□□□□□ -0.44
SREBF1-218ENST00000578469 PRSS47A8MTI9 375 aa12.32□□□□□ -0.44
SREBF1-218ENST00000578469 SCGB1D1O95968 90 aa12.32□□□□□ -0.44
SREBF1-218ENST00000578469 KRTDAPP60985 99 aa12.32□□□□□ -0.44
SREBF1-218ENST00000578469 Q8N8P6 123 aa12.32□□□□□ -0.44
SREBF1-218ENST00000578469 F5H697 171 aa12.31□□□□□ -0.44
SREBF1-218ENST00000578469 GAS8-AS1O95177 125 aa12.31□□□□□ -0.44
SREBF1-218ENST00000578469 LEPROTL1O95214 131 aa12.31□□□□□ -0.44
SREBF1-218ENST00000578469 C20orf78Q9BR46 151 aa12.31□□□□□ -0.44
SREBF1-218ENST00000578469 JPT2Q9H910 190 aa12.31□□□□□ -0.44
SREBF1-218ENST00000578469 A0A087WWL8 130 aa12.3□□□□□ -0.44
SREBF1-218ENST00000578469 A8MWV9 139 aa12.3□□□□□ -0.44
SREBF1-218ENST00000578469 IGLL1P15814 213 aa12.3□□□□□ -0.44
SREBF1-218ENST00000578469 LINC00315P59091 139 aa12.3□□□□□ -0.44
SREBF1-218ENST00000578469 PMCHL1Q16048 86 aa12.3□□□□□ -0.44
SREBF1-218ENST00000578469 OXLD1Q5BKU9 147 aa12.3□□□□□ -0.44
SREBF1-218ENST00000578469 C11orf72Q8NBR9 251 aa12.3□□□□□ -0.44
SREBF1-218ENST00000578469 HSPB8Q9UJY1 196 aa12.3□□□□□ -0.44
SREBF1-218ENST00000578469 MUC4Q99102 2169 aa12.29□□□□□ -0.44
SREBF1-218ENST00000578469 GIG44P09565 113 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-218ENST00000578469 S100A12P80511 92 aa12.29□□□□□ -0.44
SREBF1-218ENST00000578469 FAM74A4Q5TZK3 123 aa12.29□□□□□ -0.44
SREBF1-218ENST00000578469 NDUFAF3Q9BU61 184 aa12.29□□□□□ -0.44
SREBF1-218ENST00000578469 CSTL1Q9H114 145 aa12.29□□□□□ -0.44
SREBF1-218ENST00000578469 DNAH3Q8TD57 4116 aa12.29□□□□□ -0.44
SREBF1-218ENST00000578469 LINC01546A6NGU7 62 aa12.28□□□□□ -0.44
SREBF1-218ENST00000578469 PRM2P04554 102 aa12.28□□□□□ -0.44
SREBF1-218ENST00000578469 CRYGDP07320 174 aa12.28□□□□□ -0.44
SREBF1-218ENST00000578469 SUMO2P61956 95 aaKnown RBP12.28□□□□□ -0.44
SREBF1-218ENST00000578469 ZNF56Q15929 161 aa12.28□□□□□ -0.44
SREBF1-218ENST00000578469 SUMO4Q6EEV6 95 aa12.28□□□□□ -0.44
SREBF1-218ENST00000578469 TMEM263Q8WUH6 116 aaKnown RBP12.28□□□□□ -0.44
SREBF1-218ENST00000578469 RASL10AQ92737 203 aa12.28□□□□□ -0.44
SREBF1-218ENST00000578469 HBDP02042 147 aa12.27□□□□□ -0.45
SREBF1-218ENST00000578469 C3orf79P0CE67 100 aa12.27□□□□□ -0.45
SREBF1-218ENST00000578469 AZU1P20160 251 aa12.27□□□□□ -0.45
SREBF1-218ENST00000578469 BTF3P20290 206 aaKnown RBP12.27□□□□□ -0.45
SREBF1-218ENST00000578469 SMIM2Q9BVW6 85 aa12.27□□□□□ -0.45
SREBF1-218ENST00000578469 ST20Q9HBF5 79 aa12.27□□□□□ -0.45
SREBF1-218ENST00000578469 H7C1H1 209 aa12.26□□□□□ -0.45
SREBF1-218ENST00000578469 RPL39LQ96EH5 51 aaKnown RBP12.26□□□□□ -0.45
SREBF1-218ENST00000578469 C16orf74Q96GX8 76 aa12.26□□□□□ -0.45
SREBF1-218ENST00000578469 MAP1LC3CQ9BXW4 147 aa12.26□□□□□ -0.45
SREBF1-218ENST00000578469 TENM3Q9P273 2699 aa12.26□□□□□ -0.45
SREBF1-218ENST00000578469 IGLV2-18A0A075B6J9 118 aa12.25□□□□□ -0.45
SREBF1-218ENST00000578469 K7EMI3 77 aa12.25□□□□□ -0.45
SREBF1-218ENST00000578469 RHODO00212 210 aa12.25□□□□□ -0.45
SREBF1-218ENST00000578469 LAGE3Q14657 143 aa12.25□□□□□ -0.45
SREBF1-218ENST00000578469 RRN3P1Q2M238 152 aa12.25□□□□□ -0.45
SREBF1-218ENST00000578469 CSNK1G2-AS1Q8NCQ2 148 aa12.25□□□□□ -0.45
SREBF1-218ENST00000578469 RNASE8Q8TDE3 154 aaKnown RBP12.25□□□□□ -0.45
SREBF1-218ENST00000578469 TMEM70Q9BUB7 260 aa12.25□□□□□ -0.45
SREBF1-218ENST00000578469 FCER1GP30273 86 aa12.24□□□□□ -0.45
SREBF1-218ENST00000578469 RPL32P62910 135 aaKnown RBP12.24□□□□□ -0.45
SREBF1-218ENST00000578469 ZNF705AQ6ZN79 300 aaPredicted RBP12.24□□□□□ -0.45
SREBF1-218ENST00000578469 IL17DQ8TAD2 202 aa12.24□□□□□ -0.45
SREBF1-218ENST00000578469 MRPL16Q9NX20 251 aaKnown RBP12.24□□□□□ -0.45
SREBF1-218ENST00000578469 ZMAT5Q9UDW3 170 aaKnown RBP12.24□□□□□ -0.45
SREBF1-218ENST00000578469 RYR3Q15413 4870 aa12.23□□□□□ -0.45
SREBF1-218ENST00000578469 KIR2DL5BA0A0G2JN68 375 aa12.23□□□□□ -0.45
SREBF1-218ENST00000578469 KIR2DL5BA0A0G2JPC4 375 aa12.23□□□□□ -0.45
SREBF1-218ENST00000578469 TRBV6-5A0A0K0K1A5 114 aa12.23□□□□□ -0.45
SREBF1-218ENST00000578469 C20orf202A1L168 122 aa12.23□□□□□ -0.45
SREBF1-218ENST00000578469 RS1O15537 224 aa12.23□□□□□ -0.45
SREBF1-218ENST00000578469 APOC4P55056 127 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms