RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 PPBPP02775 128 aa9.62□□□□□ -0.87
SRSF1-202ENST00000578430 SLAQ13239 276 aa9.62□□□□□ -0.87
SRSF1-202ENST00000578430 MRPL16Q9NX20 251 aaKnown RBP9.62□□□□□ -0.87
SRSF1-202ENST00000578430 KIF25-AS1Q9Y6Z4 181 aa9.62□□□□□ -0.87
SRSF1-202ENST00000578430 PHOX2AO14813 284 aa9.61□□□□□ -0.87
SRSF1-202ENST00000578430 RS1O15537 224 aa9.61□□□□□ -0.87
SRSF1-202ENST00000578430 RAB4AP20338 218 aa9.61□□□□□ -0.87
SRSF1-202ENST00000578430 RAB5BP61020 215 aa9.61□□□□□ -0.87
SRSF1-202ENST00000578430 ZFP2Q6ZN57 461 aa9.61□□□□□ -0.87
SRSF1-202ENST00000578430 SBSPONQ8IVN8 264 aa9.61□□□□□ -0.87
SRSF1-202ENST00000578430 AMN1Q8IY45 258 aa9.61□□□□□ -0.87
SRSF1-202ENST00000578430 C14orf178Q8N769 122 aaPredicted RBP9.61□□□□□ -0.87
SRSF1-202ENST00000578430 POM121L12Q8N7R1 296 aa9.61□□□□□ -0.87
SRSF1-202ENST00000578430 MRAPQ8TCY5 172 aa9.61□□□□□ -0.87
SRSF1-202ENST00000578430 MRAP2Q96G30 205 aa9.61□□□□□ -0.87
SRSF1-202ENST00000578430 C18orf15Q96N68 181 aa9.61□□□□□ -0.87
SRSF1-202ENST00000578430 TM2D3Q9BRN9 247 aa9.61□□□□□ -0.87
SRSF1-202ENST00000578430 NBEAL2Q6ZNJ1 2754 aa9.6□□□□□ -0.87
SRSF1-202ENST00000578430 TRAV4A0A0B4J268 109 aa9.6□□□□□ -0.87
SRSF1-202ENST00000578430 CRYGDP07320 174 aa9.6□□□□□ -0.87
SRSF1-202ENST00000578430 Q6ZTI0 123 aa9.6□□□□□ -0.87
SRSF1-202ENST00000578430 LINC00612Q8N6U2 182 aa9.6□□□□□ -0.87
SRSF1-202ENST00000578430 RNF185Q96GF1 192 aa9.6□□□□□ -0.87
SRSF1-202ENST00000578430 PPP1R17O96001 155 aa9.59□□□□□ -0.87
SRSF1-202ENST00000578430 EMP1P54849 157 aa9.59□□□□□ -0.87
SRSF1-202ENST00000578430 LINC00315P59091 139 aa9.59□□□□□ -0.87
SRSF1-202ENST00000578430 MRPL51Q4U2R6 128 aaKnown RBP9.59□□□□□ -0.87
SRSF1-202ENST00000578430 CFAP126Q5VTH2 177 aa9.59□□□□□ -0.87
SRSF1-202ENST00000578430 ORMDL3Q8N138 153 aa9.59□□□□□ -0.87
SRSF1-202ENST00000578430 OR4C5Q8NGB2 326 aa9.59□□□□□ -0.87
SRSF1-202ENST00000578430 B9D2Q9BPU9 175 aa9.59□□□□□ -0.87
SRSF1-202ENST00000578430 C11orf68Q9H3H3 251 aaKnown RBP9.59□□□□□ -0.87
SRSF1-202ENST00000578430 ZMAT4Q9H898 229 aa9.59□□□□□ -0.87
SRSF1-202ENST00000578430 JPT2Q9H910 190 aa9.59□□□□□ -0.87
SRSF1-202ENST00000578430 LAMTOR2Q9Y2Q5 125 aa9.59□□□□□ -0.87
SRSF1-202ENST00000578430 U3KQK5 164 aa9.59□□□□□ -0.87
SRSF1-202ENST00000578430 TRGV2A0A075B6R0 118 aa9.58□□□□□ -0.88
SRSF1-202ENST00000578430 GAGE12BA1L429 117 aa9.58□□□□□ -0.88
SRSF1-202ENST00000578430 GAGE7O76087 117 aa9.58□□□□□ -0.88
SRSF1-202ENST00000578430 MGPP08493 103 aa9.58□□□□□ -0.88
SRSF1-202ENST00000578430 GAGE12FP0CL80 117 aa9.58□□□□□ -0.88
SRSF1-202ENST00000578430 GAGE12GP0CL81 117 aa9.58□□□□□ -0.88
SRSF1-202ENST00000578430 GAGE12IP0CL82 117 aa9.58□□□□□ -0.88
SRSF1-202ENST00000578430 SPART-AS1P0CW21 52 aa9.58□□□□□ -0.88
SRSF1-202ENST00000578430 CKS2P33552 79 aa9.58□□□□□ -0.88
SRSF1-202ENST00000578430 KIAA1644Q3SXP7 199 aa9.58□□□□□ -0.88
SRSF1-202ENST00000578430 ALKBH7Q9BT30 221 aaPredicted RBP9.58□□□□□ -0.88
SRSF1-202ENST00000578430 DKK2Q9UBU2 259 aa9.58□□□□□ -0.88
SRSF1-202ENST00000578430 A0A087WWL8 130 aa9.57□□□□□ -0.88
SRSF1-202ENST00000578430 H7C1H1 209 aa9.57□□□□□ -0.88
SRSF1-202ENST00000578430 FAM74A4Q5TZK3 123 aa9.57□□□□□ -0.88
SRSF1-202ENST00000578430 FAM222AQ5U5X8 452 aa9.57□□□□□ -0.88
SRSF1-202ENST00000578430 UFSP1Q6NVU6 142 aa9.57□□□□□ -0.88
SRSF1-202ENST00000578430 SAMD10Q9BYL1 202 aa9.57□□□□□ -0.88
SRSF1-202ENST00000578430 EDA2RQ9HAV5 297 aa9.57□□□□□ -0.88
SRSF1-202ENST00000578430 RETNQ9HD89 108 aa9.57□□□□□ -0.88
SRSF1-202ENST00000578430 D6R8Y8 96 aa9.56□□□□□ -0.88
SRSF1-202ENST00000578430 F5H697 171 aa9.56□□□□□ -0.88
SRSF1-202ENST00000578430 HIST1H2BKO60814 126 aa9.56□□□□□ -0.88
SRSF1-202ENST00000578430 HIST1H2BJP06899 126 aa9.56□□□□□ -0.88
SRSF1-202ENST00000578430 HIST1H2BOP23527 126 aa9.56□□□□□ -0.88
SRSF1-202ENST00000578430 SRIP30626 198 aa9.56□□□□□ -0.88
SRSF1-202ENST00000578430 HIST1H2BBP33778 126 aa9.56□□□□□ -0.88
SRSF1-202ENST00000578430 HIST1H2BDP58876 126 aa9.56□□□□□ -0.88
SRSF1-202ENST00000578430 HIST1H2BCP62807 126 aa9.56□□□□□ -0.88
SRSF1-202ENST00000578430 ZNF56Q15929 161 aa9.56□□□□□ -0.88
SRSF1-202ENST00000578430 HIST2H2BEQ16778 126 aa9.56□□□□□ -0.88
SRSF1-202ENST00000578430 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.56□□□□□ -0.88
SRSF1-202ENST00000578430 HIST1H2BHQ93079 126 aa9.56□□□□□ -0.88
SRSF1-202ENST00000578430 PRELID3AQ96N28 172 aa9.56□□□□□ -0.88
SRSF1-202ENST00000578430 HIST1H2BNQ99877 126 aa9.56□□□□□ -0.88
SRSF1-202ENST00000578430 HIST1H2BMQ99879 126 aa9.56□□□□□ -0.88
SRSF1-202ENST00000578430 OR10J3Q5JRS4 329 aa9.55□□□□□ -0.88
SRSF1-202ENST00000578430 DEFB4AO15263 64 aa9.54□□□□□ -0.88
SRSF1-202ENST00000578430 IGHV3-53P01767 116 aa9.54□□□□□ -0.88
SRSF1-202ENST00000578430 NHLRC4P0CG21 123 aaPredicted RBP9.54□□□□□ -0.88
SRSF1-202ENST00000578430 DEFB130BP0DP73 79 aa9.54□□□□□ -0.88
SRSF1-202ENST00000578430 DEFB130AP0DP74 79 aa9.54□□□□□ -0.88
SRSF1-202ENST00000578430 DAD1P61803 113 aa9.54□□□□□ -0.88
SRSF1-202ENST00000578430 Q0VG73 95 aa9.54□□□□□ -0.88
SRSF1-202ENST00000578430 SUMO4Q6EEV6 95 aa9.54□□□□□ -0.88
SRSF1-202ENST00000578430 TNFRSF6BO95407 300 aa9.53□□□□□ -0.88
SRSF1-202ENST00000578430 ZNF479Q96JC4 524 aa9.53□□□□□ -0.88
SRSF1-202ENST00000578430 C20orf78Q9BR46 151 aa9.53□□□□□ -0.88
SRSF1-202ENST00000578430 TRAV26-2A0A0B4J265 109 aa9.52□□□□□ -0.89
SRSF1-202ENST00000578430 TRBV6-5A0A0K0K1A5 114 aa9.52□□□□□ -0.89
SRSF1-202ENST00000578430 PRSS47A8MTI9 375 aa9.52□□□□□ -0.89
SRSF1-202ENST00000578430 SMKR1H3BMG3 65 aa9.52□□□□□ -0.89
SRSF1-202ENST00000578430 M0QY20 66 aa9.52□□□□□ -0.89
SRSF1-202ENST00000578430 NCR2O95944 276 aa9.52□□□□□ -0.89
SRSF1-202ENST00000578430 NRACQ8N912 160 aa9.52□□□□□ -0.89
SRSF1-202ENST00000578430 C18orf32Q8TCD1 76 aa9.52□□□□□ -0.89
SRSF1-202ENST00000578430 MAP1LC3AQ9H492 121 aa9.52□□□□□ -0.89
SRSF1-202ENST00000578430 CELA1Q9UNI1 258 aa9.52□□□□□ -0.89
SRSF1-202ENST00000578430 NACAE9PAV3 2078 aa9.51□□□□□ -0.89
SRSF1-202ENST00000578430 IGHV3-73A0A0B4J1V6 119 aa9.51□□□□□ -0.89
SRSF1-202ENST00000578430 TRGV4A0A0C4DH28 118 aa9.51□□□□□ -0.89
SRSF1-202ENST00000578430 TRBV10-1A0A0K0K1A3 114 aa9.51□□□□□ -0.89
SRSF1-202ENST00000578430 TRBV6-4A0A1B0GX49 114 aa9.51□□□□□ -0.89
SRSF1-202ENST00000578430 NPYP01303 97 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms