RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 LGALS1P09382 135 aaKnown RBP8.42□□□□□ -1.06
RNF43-203ENST00000577716 DEFB1P60022 68 aa8.42□□□□□ -1.06
RNF43-203ENST00000577716 ELANEP08246 267 aa8.42□□□□□ -1.06
RNF43-203ENST00000577716 ZFP36P26651 326 aaKnown RBP8.42□□□□□ -1.06
RNF43-203ENST00000577716 ODF1Q14990 250 aa8.42□□□□□ -1.06
RNF43-203ENST00000577716 ATG2AQ2TAZ0 1938 aa8.42□□□□□ -1.06
RNF43-203ENST00000577716 SRSF2Q01130 221 aaKnown RBP8.41□□□□□ -1.06
RNF43-203ENST00000577716 RHOHQ15669 191 aa8.41□□□□□ -1.06
RNF43-203ENST00000577716 SPATA12Q7Z6I5 190 aa8.41□□□□□ -1.06
RNF43-203ENST00000577716 TP73-AS1Q9UF72 201 aa8.41□□□□□ -1.06
RNF43-203ENST00000577716 GHRHP01286 108 aa8.41□□□□□ -1.06
RNF43-203ENST00000577716 IGHV4-38-2P0DP08 117 aa8.41□□□□□ -1.06
RNF43-203ENST00000577716 ZNF80P51504 273 aaPredicted RBP8.41□□□□□ -1.06
RNF43-203ENST00000577716 DEFB112Q30KQ8 113 aa8.41□□□□□ -1.06
RNF43-203ENST00000577716 FOXI2Q6ZQN5 318 aa8.41□□□□□ -1.06
RNF43-203ENST00000577716 Q8NA96 180 aa8.41□□□□□ -1.06
RNF43-203ENST00000577716 HIGD1BQ9P298 99 aa8.41□□□□□ -1.06
RNF43-203ENST00000577716 CFC1BP0CG36 223 aa8.4□□□□□ -1.06
RNF43-203ENST00000577716 CFC1P0CG37 223 aa8.4□□□□□ -1.06
RNF43-203ENST00000577716 GAGE2AQ6NT46 116 aa8.4□□□□□ -1.06
RNF43-203ENST00000577716 C9orf47Q6ZRZ4 202 aa8.4□□□□□ -1.06
RNF43-203ENST00000577716 C5orf56Q8N8D9 126 aa8.4□□□□□ -1.06
RNF43-203ENST00000577716 ADORA2A-AS1P86434 159 aa8.4□□□□□ -1.06
RNF43-203ENST00000577716 WFDC2Q14508 124 aa8.4□□□□□ -1.06
RNF43-203ENST00000577716 SP5Q6BEB4 398 aaPredicted RBP8.4□□□□□ -1.06
RNF43-203ENST00000577716 SUMO4Q6EEV6 95 aa8.4□□□□□ -1.06
RNF43-203ENST00000577716 NTN5Q8WTR8 489 aaPredicted RBP8.4□□□□□ -1.06
RNF43-203ENST00000577716 PFN2P35080 140 aa8.4□□□□□ -1.06
RNF43-203ENST00000577716 ZFP2Q6ZN57 461 aa8.4□□□□□ -1.06
RNF43-203ENST00000577716 A0A0J9YXV3 536 aa8.4□□□□□ -1.07
RNF43-203ENST00000577716 GAGE7O76087 117 aa8.4□□□□□ -1.07
RNF43-203ENST00000577716 GAGE12FP0CL80 117 aa8.4□□□□□ -1.07
RNF43-203ENST00000577716 GAGE12GP0CL81 117 aa8.4□□□□□ -1.07
RNF43-203ENST00000577716 GAGE12IP0CL82 117 aa8.4□□□□□ -1.07
RNF43-203ENST00000577716 HOXD3P31249 432 aaPredicted RBP8.4□□□□□ -1.07
RNF43-203ENST00000577716 HIST1H4AP62805 103 aaKnown RBP8.4□□□□□ -1.07
RNF43-203ENST00000577716 ZNF48Q96MX3 618 aaPredicted RBP8.4□□□□□ -1.07
RNF43-203ENST00000577716 RPL39P62891 51 aaKnown RBP8.39□□□□□ -1.07
RNF43-203ENST00000577716 TMEM243Q9BU79 118 aa8.39□□□□□ -1.07
RNF43-203ENST00000577716 SS18Q15532 418 aa8.38□□□□□ -1.07
RNF43-203ENST00000577716 RNF114Q9Y508 228 aa8.38□□□□□ -1.07
RNF43-203ENST00000577716 DEFB136Q30KP8 78 aa8.38□□□□□ -1.07
RNF43-203ENST00000577716 OVOL2Q9BRP0 275 aa8.38□□□□□ -1.07
RNF43-203ENST00000577716 LAMTOR3Q9UHA4 124 aa8.38□□□□□ -1.07
RNF43-203ENST00000577716 J3QLI3 93 aa8.38□□□□□ -1.07
RNF43-203ENST00000577716 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.37□□□□□ -1.07
RNF43-203ENST00000577716 IGHV4-30-2A0A087WSY4 118 aa8.37□□□□□ -1.07
RNF43-203ENST00000577716 IGKV2-29A2NJV5 120 aaPredicted RBP8.37□□□□□ -1.07
RNF43-203ENST00000577716 GAGE6Q13070 117 aa8.37□□□□□ -1.07
RNF43-203ENST00000577716 CARD19Q96LW7 228 aa8.37□□□□□ -1.07
RNF43-203ENST00000577716 A0A0C4DFX4 3053 aa8.37□□□□□ -1.07
RNF43-203ENST00000577716 A4D1N5 150 aa8.37□□□□□ -1.07
RNF43-203ENST00000577716 FBXL19-AS1Q494R0 122 aa8.37□□□□□ -1.07
RNF43-203ENST00000577716 UNQ9165/PRO28630Q6UXU0 137 aa8.37□□□□□ -1.07
RNF43-203ENST00000577716 DPH3Q96FX2 82 aa8.37□□□□□ -1.07
RNF43-203ENST00000577716 UNC80Q8N2C7 3258 aa8.37□□□□□ -1.07
RNF43-203ENST00000577716 INAFM2P0DMQ5 153 aa8.37□□□□□ -1.07
RNF43-203ENST00000577716 SIRPDQ9H106 197 aa8.37□□□□□ -1.07
RNF43-203ENST00000577716 SPTBN4Q9H254 2564 aa8.37□□□□□ -1.07
RNF43-203ENST00000577716 TRAV12-1A0A0B4J245 112 aa8.36□□□□□ -1.07
RNF43-203ENST00000577716 HERVK_113P63121 156 aa8.36□□□□□ -1.07
RNF43-203ENST00000577716 MYCNOSP40205 109 aa8.36□□□□□ -1.07
RNF43-203ENST00000577716 BAALCQ8WXS3 180 aa8.36□□□□□ -1.07
RNF43-203ENST00000577716 Q96MF0 132 aa8.36□□□□□ -1.07
RNF43-203ENST00000577716 VPREB3Q9UKI3 123 aa8.36□□□□□ -1.07
RNF43-203ENST00000577716 E9PLD3 99 aa8.36□□□□□ -1.07
RNF43-203ENST00000577716 U3KQE9 123 aa8.36□□□□□ -1.07
RNF43-203ENST00000577716 IGLC6P0CF74 106 aa8.36□□□□□ -1.07
RNF43-203ENST00000577716 CHD8Q9HCK8 2581 aa8.35□□□□□ -1.07
RNF43-203ENST00000577716 C11orf86A6NJI1 115 aa8.35□□□□□ -1.07
RNF43-203ENST00000577716 Q8N1Y9 231 aa8.35□□□□□ -1.07
RNF43-203ENST00000577716 LINC01548A6NM66 108 aa8.35□□□□□ -1.07
RNF43-203ENST00000577716 TRBV12-3P01733 135 aa8.35□□□□□ -1.07
RNF43-203ENST00000577716 CRYGBP07316 175 aa8.35□□□□□ -1.07
RNF43-203ENST00000577716 CRIP1P50238 77 aa8.35□□□□□ -1.07
RNF43-203ENST00000577716 DNAJC30Q96LL9 226 aa8.35□□□□□ -1.07
RNF43-203ENST00000577716 TOMM6Q96B49 74 aa8.35□□□□□ -1.07
RNF43-203ENST00000577716 Q9H8V8 135 aa8.35□□□□□ -1.07
RNF43-203ENST00000577716 ABCA12Q86UK0 2595 aa8.34□□□□□ -1.07
RNF43-203ENST00000577716 NXPH4O95158 308 aa8.34□□□□□ -1.07
RNF43-203ENST00000577716 CCDC140Q96MF4 163 aa8.34□□□□□ -1.07
RNF43-203ENST00000577716 EDA2RQ9HAV5 297 aa8.34□□□□□ -1.07
RNF43-203ENST00000577716 MUSTN1Q8IVN3 82 aa8.34□□□□□ -1.07
RNF43-203ENST00000577716 LINC00310P59036 64 aa8.33□□□□□ -1.08
RNF43-203ENST00000577716 ODF3BA8MYP8 253 aa8.33□□□□□ -1.08
RNF43-203ENST00000577716 IGHG2P01859 326 aa8.33□□□□□ -1.08
RNF43-203ENST00000577716 SLURP1P55000 103 aa8.33□□□□□ -1.08
RNF43-203ENST00000577716 APRG1Q8IVJ8 170 aa8.33□□□□□ -1.08
RNF43-203ENST00000577716 C10orf105Q8TEF2 133 aa8.33□□□□□ -1.08
RNF43-203ENST00000577716 SPANXA1Q9NS26 97 aa8.33□□□□□ -1.08
RNF43-203ENST00000577716 TIMM17AQ99595 171 aa8.33□□□□□ -1.08
RNF43-203ENST00000577716 ZFYVE26Q68DK2 2539 aa8.33□□□□□ -1.08
RNF43-203ENST00000577716 C15orf53Q8NAA6 179 aa8.33□□□□□ -1.08
RNF43-203ENST00000577716 K7EMT4 169 aa8.32□□□□□ -1.08
RNF43-203ENST00000577716 MED14OSP0DP75 135 aa8.32□□□□□ -1.08
RNF43-203ENST00000577716 TEN1Q86WV5 123 aa8.32□□□□□ -1.08
RNF43-203ENST00000577716 DOPEY1Q5JWR5 2465 aa8.32□□□□□ -1.08
RNF43-203ENST00000577716 SOCS3O14543 225 aa8.32□□□□□ -1.08
RNF43-203ENST00000577716 ANKRD29Q8N6D5 301 aa8.32□□□□□ -1.08
RNF43-203ENST00000577716 PRUNE2Q8WUY3 3088 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms