RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ADGRG4Q8IZF6 3080 aa7.63□□□□□ -1.19
SMG6-213ENST00000573166 LOC400499M0QZD8 3231 aa7.63□□□□□ -1.19
SMG6-213ENST00000573166 C3orf79P0CE67 100 aa7.63□□□□□ -1.19
SMG6-213ENST00000573166 OXLD1Q5BKU9 147 aa7.63□□□□□ -1.19
SMG6-213ENST00000573166 RASL11AQ6T310 242 aa7.63□□□□□ -1.19
SMG6-213ENST00000573166 PHLDA1Q8WV24 401 aaPredicted RBP7.63□□□□□ -1.19
SMG6-213ENST00000573166 CHCHD1Q96BP2 118 aaKnown RBP7.63□□□□□ -1.19
SMG6-213ENST00000573166 SPCS1Q9Y6A9 102 aa7.63□□□□□ -1.19
SMG6-213ENST00000573166 U3KQE9 123 aa7.63□□□□□ -1.19
SMG6-213ENST00000573166 H7C2G1 150 aa7.62□□□□□ -1.19
SMG6-213ENST00000573166 MRGPRG-AS1Q2M3A8 158 aa7.62□□□□□ -1.19
SMG6-213ENST00000573166 ZNF493Q6ZR52 646 aa7.62□□□□□ -1.19
SMG6-213ENST00000573166 FSHBP01225 129 aa7.62□□□□□ -1.19
SMG6-213ENST00000573166 LINC00482Q8N8I6 264 aa7.62□□□□□ -1.19
SMG6-213ENST00000573166 RNF152Q8N8N0 203 aa7.62□□□□□ -1.19
SMG6-213ENST00000573166 GAGE12JA6NER3 117 aa7.61□□□□□ -1.19
SMG6-213ENST00000573166 M0R2P5 195 aa7.61□□□□□ -1.19
SMG6-213ENST00000573166 LGALS3P17931 250 aaKnown RBP7.61□□□□□ -1.19
SMG6-213ENST00000573166 GAGE1Q13065 139 aa7.61□□□□□ -1.19
SMG6-213ENST00000573166 GAGE4Q13068 117 aa7.61□□□□□ -1.19
SMG6-213ENST00000573166 GAGE5Q13069 117 aa7.61□□□□□ -1.19
SMG6-213ENST00000573166 GAGE13Q4V321 117 aa7.61□□□□□ -1.19
SMG6-213ENST00000573166 DMDP11532 3685 aa7.61□□□□□ -1.19
SMG6-213ENST00000573166 SETXQ7Z333 2677 aaKnown RBP7.61□□□□□ -1.19
SMG6-213ENST00000573166 HBDP02042 147 aa7.61□□□□□ -1.19
SMG6-213ENST00000573166 IFI27P40305 119 aaPredicted RBP7.61□□□□□ -1.19
SMG6-213ENST00000573166 SUMO2P61956 95 aaKnown RBP7.61□□□□□ -1.19
SMG6-213ENST00000573166 TP73-AS1Q9UF72 201 aa7.61□□□□□ -1.19
SMG6-213ENST00000573166 CYSLTR1Q9Y271 337 aa7.61□□□□□ -1.19
SMG6-213ENST00000573166 H3BMM0 161 aa7.61□□□□□ -1.19
SMG6-213ENST00000573166 H3BUT2 72 aa7.61□□□□□ -1.19
SMG6-213ENST00000573166 KLF12Q9Y4X4 402 aa7.61□□□□□ -1.19
SMG6-213ENST00000573166 DEFB4AO15263 64 aa7.6□□□□□ -1.19
SMG6-213ENST00000573166 TYMSP04818 313 aa7.6□□□□□ -1.19
SMG6-213ENST00000573166 SLAQ13239 276 aa7.6□□□□□ -1.19
SMG6-213ENST00000573166 ORMDL2Q53FV1 153 aa7.6□□□□□ -1.19
SMG6-213ENST00000573166 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.6□□□□□ -1.19
SMG6-213ENST00000573166 VCYO14598 125 aa7.6□□□□□ -1.19
SMG6-213ENST00000573166 TET2Q6N021 2002 aaPredicted RBP7.6□□□□□ -1.19
SMG6-213ENST00000573166 BRI3O95415 125 aa7.6□□□□□ -1.19
SMG6-213ENST00000573166 MRPL52Q86TS9 123 aaKnown RBP7.6□□□□□ -1.19
SMG6-213ENST00000573166 Q8N1Y9 231 aa7.6□□□□□ -1.19
SMG6-213ENST00000573166 SPART-AS1P0CW21 52 aa7.6□□□□□ -1.19
SMG6-213ENST00000573166 SEC11AP67812 179 aa7.6□□□□□ -1.19
SMG6-213ENST00000573166 KRTAP1-3Q8IUG1 177 aa7.6□□□□□ -1.19
SMG6-213ENST00000573166 C20orf173Q96LM9 149 aa7.6□□□□□ -1.19
SMG6-213ENST00000573166 VCX2Q9H322 139 aa7.6□□□□□ -1.19
SMG6-213ENST00000573166 A0A1B0GWB2 263 aa7.59□□□□□ -1.19
SMG6-213ENST00000573166 hDV102S1A0JD36 115 aa7.59□□□□□ -1.19
SMG6-213ENST00000573166 F8W735 103 aaPredicted RBP7.59□□□□□ -1.19
SMG6-213ENST00000573166 NAA38Q9BRA0 125 aaKnown RBP7.59□□□□□ -1.19
SMG6-213ENST00000573166 EDN2P20800 178 aa7.59□□□□□ -1.19
SMG6-213ENST00000573166 COA6Q5JTJ3 125 aaKnown RBP7.59□□□□□ -1.19
SMG6-213ENST00000573166 TMEM170BQ5T4T1 132 aa7.59□□□□□ -1.19
SMG6-213ENST00000573166 FAM104BQ5XKR9 115 aa7.59□□□□□ -1.19
SMG6-213ENST00000573166 IFI27L1Q96BM0 104 aa7.59□□□□□ -1.19
SMG6-213ENST00000573166 C16orf74Q96GX8 76 aa7.59□□□□□ -1.19
SMG6-213ENST00000573166 TRPT1Q86TN4 253 aaKnown RBP7.59□□□□□ -1.19
SMG6-213ENST00000573166 Q8N2B8 174 aa7.59□□□□□ -1.19
SMG6-213ENST00000573166 ZNRF2Q8NHG8 242 aa7.59□□□□□ -1.19
SMG6-213ENST00000573166 ORAOV1Q8WV07 137 aa7.59□□□□□ -1.19
SMG6-213ENST00000573166 STPG4Q8N801 248 aa7.58□□□□□ -1.2
SMG6-213ENST00000573166 WFDC10AQ9H1F0 79 aa7.58□□□□□ -1.2
SMG6-213ENST00000573166 TRAV2A0A0B4J234 112 aa7.58□□□□□ -1.2
SMG6-213ENST00000573166 PAX4O43316 350 aa7.58□□□□□ -1.2
SMG6-213ENST00000573166 CRPP02741 224 aa7.58□□□□□ -1.2
SMG6-213ENST00000573166 C20orf144Q9BQM9 153 aa7.58□□□□□ -1.2
SMG6-213ENST00000573166 SMIM27A0A1W2PRY6 76 aa7.58□□□□□ -1.2
SMG6-213ENST00000573166 ADARB2-AS1A8MUL3 147 aa7.58□□□□□ -1.2
SMG6-213ENST00000573166 Q0VG73 95 aa7.58□□□□□ -1.2
SMG6-213ENST00000573166 ADAMTSL5Q6ZMM2 481 aa7.58□□□□□ -1.2
SMG6-213ENST00000573166 MRAP2Q96G30 205 aa7.58□□□□□ -1.2
SMG6-213ENST00000573166 TRAV26-2A0A0B4J265 109 aa7.57□□□□□ -1.2
SMG6-213ENST00000573166 A0A0J9YY99 117 aa7.57□□□□□ -1.2
SMG6-213ENST00000573166 TNFRSF6BO95407 300 aa7.57□□□□□ -1.2
SMG6-213ENST00000573166 PRB2P02812 416 aaPredicted RBP7.57□□□□□ -1.2
SMG6-213ENST00000573166 ITPR2Q14571 2701 aa7.57□□□□□ -1.2
SMG6-213ENST00000573166 CIRBPQ14011 172 aaKnown RBP7.57□□□□□ -1.2
SMG6-213ENST00000573166 NHP2Q9NX24 153 aaKnown RBP7.57□□□□□ -1.2
SMG6-213ENST00000573166 A0A096LPF7 62 aa7.57□□□□□ -1.2
SMG6-213ENST00000573166 LAGE3Q14657 143 aa7.57□□□□□ -1.2
SMG6-213ENST00000573166 GDF5OSQ5U4N7 250 aa7.57□□□□□ -1.2
SMG6-213ENST00000573166 LINC01559Q495D7 138 aa7.57□□□□□ -1.2
SMG6-213ENST00000573166 TP53TG3Q9ULZ0 132 aa7.57□□□□□ -1.2
SMG6-213ENST00000573166 CFAP47Q6ZTR5 3102 aa7.56□□□□□ -1.2
SMG6-213ENST00000573166 DCHS1Q96JQ0 3298 aa7.56□□□□□ -1.2
SMG6-213ENST00000573166 TRAV8-2A0A0B4J237 113 aa7.56□□□□□ -1.2
SMG6-213ENST00000573166 DPM2O94777 84 aa7.56□□□□□ -1.2
SMG6-213ENST00000573166 HSD52Q0P140 79 aa7.56□□□□□ -1.2
SMG6-213ENST00000573166 KRTAP24-1Q3LI83 254 aa7.56□□□□□ -1.2
SMG6-213ENST00000573166 OR5A1Q8NGJ0 315 aa7.56□□□□□ -1.2
SMG6-213ENST00000573166 TRBV7-9A0A0J9YWB2 115 aa7.56□□□□□ -1.2
SMG6-213ENST00000573166 SDHAF1A6NFY7 115 aa7.56□□□□□ -1.2
SMG6-213ENST00000573166 C18orf32Q8TCD1 76 aa7.56□□□□□ -1.2
SMG6-213ENST00000573166 TOMM7Q9P0U1 55 aa7.56□□□□□ -1.2
SMG6-213ENST00000573166 IGHV3-38A0A0C4DH36 116 aa7.56□□□□□ -1.2
SMG6-213ENST00000573166 APOMO95445 188 aa7.56□□□□□ -1.2
SMG6-213ENST00000573166 MRPL51Q4U2R6 128 aaKnown RBP7.56□□□□□ -1.2
SMG6-213ENST00000573166 MPV17L2Q567V2 206 aa7.56□□□□□ -1.2
SMG6-213ENST00000573166 DCANP1Q8TF63 244 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms