RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 CRYBA4P53673 196 aa10.18□□□□□ -0.78
NPLOC4-209ENST00000572760 RNF212Q495C1 297 aa10.18□□□□□ -0.78
NPLOC4-209ENST00000572760 ZFP2Q6ZN57 461 aa10.18□□□□□ -0.78
NPLOC4-209ENST00000572760 ANAPC16Q96DE5 110 aa10.18□□□□□ -0.78
NPLOC4-209ENST00000572760 FOXA3P55318 350 aaPredicted RBP10.17□□□□□ -0.78
NPLOC4-209ENST00000572760 NDUFA5Q16718 116 aa10.17□□□□□ -0.78
NPLOC4-209ENST00000572760 SMIM15Q7Z3B0 74 aa10.17□□□□□ -0.78
NPLOC4-209ENST00000572760 C14orf178Q8N769 122 aaPredicted RBP10.17□□□□□ -0.78
NPLOC4-209ENST00000572760 MSRB1Q9NZV6 116 aa10.17□□□□□ -0.78
NPLOC4-209ENST00000572760 NAT8BQ9UHF3 227 aa10.17□□□□□ -0.78
NPLOC4-209ENST00000572760 APLNQ9ULZ1 77 aa10.17□□□□□ -0.78
NPLOC4-209ENST00000572760 A0A1B0GUT8 65 aa10.16□□□□□ -0.78
NPLOC4-209ENST00000572760 F5H697 171 aa10.16□□□□□ -0.78
NPLOC4-209ENST00000572760 CRYGDP07320 174 aa10.16□□□□□ -0.78
NPLOC4-209ENST00000572760 GATA1P15976 413 aaPredicted RBP10.16□□□□□ -0.78
NPLOC4-209ENST00000572760 ZNF56Q15929 161 aa10.16□□□□□ -0.78
NPLOC4-209ENST00000572760 PRADC1Q9BSG0 188 aa10.16□□□□□ -0.78
NPLOC4-209ENST00000572760 H3BNG1 76 aa10.15□□□□□ -0.78
NPLOC4-209ENST00000572760 MGPP08493 103 aa10.15□□□□□ -0.78
NPLOC4-209ENST00000572760 GYPEP15421 78 aa10.15□□□□□ -0.78
NPLOC4-209ENST00000572760 RIGQ13278 110 aa10.15□□□□□ -0.78
NPLOC4-209ENST00000572760 RHOHQ15669 191 aa10.15□□□□□ -0.78
NPLOC4-209ENST00000572760 C10orf91Q5T1B1 145 aa10.15□□□□□ -0.78
NPLOC4-209ENST00000572760 SLC7A5P1Q8MH63 180 aa10.15□□□□□ -0.78
NPLOC4-209ENST00000572760 NUP35Q8NFH5 326 aa10.15□□□□□ -0.78
NPLOC4-209ENST00000572760 VSIG2Q96IQ7 327 aa10.15□□□□□ -0.78
NPLOC4-209ENST00000572760 CNFNQ9BYD5 112 aa10.15□□□□□ -0.78
NPLOC4-209ENST00000572760 CARHSP1Q9Y2V2 147 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-209ENST00000572760 ICOSQ9Y6W8 199 aa10.15□□□□□ -0.78
NPLOC4-209ENST00000572760 TRBV6-4A0A1B0GX49 114 aa10.14□□□□□ -0.79
NPLOC4-209ENST00000572760 SMIM27A0A1W2PRY6 76 aa10.14□□□□□ -0.79
NPLOC4-209ENST00000572760 APOC3P02656 99 aa10.14□□□□□ -0.79
NPLOC4-209ENST00000572760 MRPL23Q16540 153 aaKnown RBP10.14□□□□□ -0.79
NPLOC4-209ENST00000572760 SLC25A29Q8N8R3 303 aa10.14□□□□□ -0.79
NPLOC4-209ENST00000572760 DPH3P1Q9H4G8 78 aa10.14□□□□□ -0.79
NPLOC4-209ENST00000572760 K7EQD1 137 aa10.13□□□□□ -0.79
NPLOC4-209ENST00000572760 EVI2AP22794 236 aa10.13□□□□□ -0.79
NPLOC4-209ENST00000572760 SRIP30626 198 aa10.13□□□□□ -0.79
NPLOC4-209ENST00000572760 UFSP1Q6NVU6 142 aa10.13□□□□□ -0.79
NPLOC4-209ENST00000572760 UBE2DNLQ8IWF7 75 aa10.13□□□□□ -0.79
NPLOC4-209ENST00000572760 CTDSP1Q9GZU7 261 aa10.13□□□□□ -0.79
NPLOC4-209ENST00000572760 TENM2Q9NT68 2774 aa10.12□□□□□ -0.79
NPLOC4-209ENST00000572760 RAB4BP61018 213 aa10.12□□□□□ -0.79
NPLOC4-209ENST00000572760 Q6ZSN1 163 aa10.12□□□□□ -0.79
NPLOC4-209ENST00000572760 CLRN3Q8NCR9 226 aa10.12□□□□□ -0.79
NPLOC4-209ENST00000572760 A0A096LPF7 62 aa10.11□□□□□ -0.79
NPLOC4-209ENST00000572760 LOC100131303A0A0U1RQF7 123 aa10.11□□□□□ -0.79
NPLOC4-209ENST00000572760 C7orf77A4D0Y5 90 aa10.11□□□□□ -0.79
NPLOC4-209ENST00000572760 P0DMU3 169 aa10.11□□□□□ -0.79
NPLOC4-209ENST00000572760 FAM231AP0DMU4 169 aa10.11□□□□□ -0.79
NPLOC4-209ENST00000572760 FAM231CP0DMU5 169 aa10.11□□□□□ -0.79
NPLOC4-209ENST00000572760 SVBPQ8N300 66 aa10.11□□□□□ -0.79
NPLOC4-209ENST00000572760 RPS10P5Q9NQ39 176 aa10.11□□□□□ -0.79
NPLOC4-209ENST00000572760 KIF25-AS1Q9Y6Z4 181 aa10.11□□□□□ -0.79
NPLOC4-209ENST00000572760 CSMD3Q7Z407 3707 aa10.1□□□□□ -0.79
NPLOC4-209ENST00000572760 H7C1H1 209 aa10.1□□□□□ -0.79
NPLOC4-209ENST00000572760 SNAPINO95295 136 aa10.1□□□□□ -0.79
NPLOC4-209ENST00000572760 LY6G6CO95867 125 aa10.1□□□□□ -0.79
NPLOC4-209ENST00000572760 S100A8P05109 93 aa10.1□□□□□ -0.79
NPLOC4-209ENST00000572760 CAMPP49913 170 aa10.1□□□□□ -0.79
NPLOC4-209ENST00000572760 CCL18P55774 89 aa10.1□□□□□ -0.79
NPLOC4-209ENST00000572760 FAM3BP58499 235 aaPredicted RBP10.1□□□□□ -0.79
NPLOC4-209ENST00000572760 RHEBQ15382 184 aa10.1□□□□□ -0.79
NPLOC4-209ENST00000572760 MRPL54Q6P161 138 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-209ENST00000572760 KCNIP4Q6PIL6 250 aa10.1□□□□□ -0.79
NPLOC4-209ENST00000572760 NEGR1Q7Z3B1 354 aa10.1□□□□□ -0.79
NPLOC4-209ENST00000572760 A0A1B0GW15 77 aa10.09□□□□□ -0.79
NPLOC4-209ENST00000572760 GAGE12JA6NER3 117 aa10.09□□□□□ -0.79
NPLOC4-209ENST00000572760 GAGE1Q13065 139 aa10.09□□□□□ -0.79
NPLOC4-209ENST00000572760 GAGE4Q13068 117 aa10.09□□□□□ -0.79
NPLOC4-209ENST00000572760 GAGE5Q13069 117 aa10.09□□□□□ -0.79
NPLOC4-209ENST00000572760 GAGE13Q4V321 117 aa10.09□□□□□ -0.79
NPLOC4-209ENST00000572760 SH2D6Q7Z4S9 175 aa10.09□□□□□ -0.79
NPLOC4-209ENST00000572760 STARD9Q9P2P6 4700 aa10.08□□□□□ -0.8
NPLOC4-209ENST00000572760 TRBV10-1A0A0K0K1A3 114 aa10.08□□□□□ -0.8
NPLOC4-209ENST00000572760 S100PP25815 95 aa10.08□□□□□ -0.8
NPLOC4-209ENST00000572760 LINC00315P59091 139 aa10.08□□□□□ -0.8
NPLOC4-209ENST00000572760 RPL36AP83881 106 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-209ENST00000572760 LGALS9CQ6DKI2 356 aa10.08□□□□□ -0.8
NPLOC4-209ENST00000572760 SUMO4Q6EEV6 95 aa10.08□□□□□ -0.8
NPLOC4-209ENST00000572760 ZNRF2Q8NHG8 242 aa10.08□□□□□ -0.8
NPLOC4-209ENST00000572760 LINC00476Q8WZB0 136 aa10.08□□□□□ -0.8
NPLOC4-209ENST00000572760 RPL36ALQ969Q0 106 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-209ENST00000572760 IMMP2LQ96T52 175 aa10.08□□□□□ -0.8
NPLOC4-209ENST00000572760 TMEM191AQ9H0A3 160 aa10.08□□□□□ -0.8
NPLOC4-209ENST00000572760 A0A087WWC5 75 aa10.07□□□□□ -0.8
NPLOC4-209ENST00000572760 HBBP68871 147 aa10.07□□□□□ -0.8
NPLOC4-209ENST00000572760 ATP5L2Q7Z4Y8 100 aa10.07□□□□□ -0.8
NPLOC4-209ENST00000572760 BTF3L4Q96K17 158 aa10.07□□□□□ -0.8
NPLOC4-209ENST00000572760 ESRGQ1W209 222 aa10.06□□□□□ -0.8
NPLOC4-209ENST00000572760 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.06□□□□□ -0.8
NPLOC4-209ENST00000572760 ATP6V0E2Q8NHE4 81 aa10.06□□□□□ -0.8
NPLOC4-209ENST00000572760 TMEM242Q9NWH2 141 aa10.06□□□□□ -0.8
NPLOC4-209ENST00000572760 TNFRSF18Q9Y5U5 241 aa10.06□□□□□ -0.8
NPLOC4-209ENST00000572760 TRBV7-3A0A075B6L6 115 aa10.05□□□□□ -0.8
NPLOC4-209ENST00000572760 LCE6AA0A183 80 aa10.05□□□□□ -0.8
NPLOC4-209ENST00000572760 RASL11AQ6T310 242 aa10.05□□□□□ -0.8
NPLOC4-209ENST00000572760 AMN1Q8IY45 258 aa10.05□□□□□ -0.8
NPLOC4-209ENST00000572760 NEXN-AS1Q8NBZ9 246 aa10.05□□□□□ -0.8
NPLOC4-209ENST00000572760 Q9UF83 564 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms