RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 KRTDAPP60985 99 aa14.17□□□□□ -0.14
RPAIN-210ENST00000571613 SHISA2Q6UWI4 295 aa14.17□□□□□ -0.14
RPAIN-210ENST00000571613 MUC4Q99102 2169 aa14.16□□□□□ -0.14
RPAIN-210ENST00000571613 JMJD1CQ15652 2540 aa14.16□□□□□ -0.14
RPAIN-210ENST00000571613 A8MWV9 139 aa14.16□□□□□ -0.14
RPAIN-210ENST00000571613 LINC00315P59091 139 aa14.16□□□□□ -0.14
RPAIN-210ENST00000571613 C3orf56Q8N813 242 aa14.16□□□□□ -0.14
RPAIN-210ENST00000571613 TRAV26-2A0A0B4J265 109 aa14.15□□□□□ -0.14
RPAIN-210ENST00000571613 K7EMI3 77 aa14.15□□□□□ -0.14
RPAIN-210ENST00000571613 GATA1P15976 413 aaPredicted RBP14.15□□□□□ -0.14
RPAIN-210ENST00000571613 C11orf72Q8NBR9 251 aa14.15□□□□□ -0.14
RPAIN-210ENST00000571613 WFDC10AQ9H1F0 79 aa14.15□□□□□ -0.14
RPAIN-210ENST00000571613 GAS8-AS1O95177 125 aa14.14□□□□□ -0.15
RPAIN-210ENST00000571613 RPL35AP18077 110 aaKnown RBP14.14□□□□□ -0.15
RPAIN-210ENST00000571613 BTF3P20290 206 aaKnown RBP14.14□□□□□ -0.15
RPAIN-210ENST00000571613 CRYGDP07320 174 aa14.14□□□□□ -0.15
RPAIN-210ENST00000571613 C3orf79P0CE67 100 aa14.14□□□□□ -0.15
RPAIN-210ENST00000571613 SUMO2P61956 95 aaKnown RBP14.14□□□□□ -0.15
RPAIN-210ENST00000571613 TMEM263Q8WUH6 116 aaKnown RBP14.14□□□□□ -0.15
RPAIN-210ENST00000571613 RASL10AQ92737 203 aa14.14□□□□□ -0.15
RPAIN-210ENST00000571613 A0A087WWL8 130 aa14.13□□□□□ -0.15
RPAIN-210ENST00000571613 F5H697 171 aa14.13□□□□□ -0.15
RPAIN-210ENST00000571613 HBDP02042 147 aa14.13□□□□□ -0.15
RPAIN-210ENST00000571613 GIG44P09565 113 aaPredicted RBP14.13□□□□□ -0.15
RPAIN-210ENST00000571613 RPL32P62910 135 aaKnown RBP14.13□□□□□ -0.15
RPAIN-210ENST00000571613 PMCHL1Q16048 86 aa14.13□□□□□ -0.15
RPAIN-210ENST00000571613 C12orf54Q6X4T0 127 aa14.13□□□□□ -0.15
RPAIN-210ENST00000571613 JPT2Q9H910 190 aa14.13□□□□□ -0.15
RPAIN-210ENST00000571613 IGHV3OR16-12A0A075B7B8 117 aa14.12□□□□□ -0.15
RPAIN-210ENST00000571613 TMEM70Q9BUB7 260 aa14.12□□□□□ -0.15
RPAIN-210ENST00000571613 SMIM2Q9BVW6 85 aa14.12□□□□□ -0.15
RPAIN-210ENST00000571613 MAP1LC3CQ9BXW4 147 aa14.12□□□□□ -0.15
RPAIN-210ENST00000571613 CSTL1Q9H114 145 aa14.12□□□□□ -0.15
RPAIN-210ENST00000571613 IGLV2-18A0A075B6J9 118 aa14.11□□□□□ -0.15
RPAIN-210ENST00000571613 FAM74A4Q5TZK3 123 aa14.11□□□□□ -0.15
RPAIN-210ENST00000571613 SUMO4Q6EEV6 95 aa14.11□□□□□ -0.15
RPAIN-210ENST00000571613 H7C1H1 209 aa14.1□□□□□ -0.15
RPAIN-210ENST00000571613 RHODO00212 210 aa14.1□□□□□ -0.15
RPAIN-210ENST00000571613 ZNF56Q15929 161 aa14.1□□□□□ -0.15
RPAIN-210ENST00000571613 RNASE8Q8TDE3 154 aaKnown RBP14.1□□□□□ -0.15
RPAIN-210ENST00000571613 EDA2RQ9HAV5 297 aa14.1□□□□□ -0.15
RPAIN-210ENST00000571613 FCER1GP30273 86 aa14.1□□□□□ -0.15
RPAIN-210ENST00000571613 LAGE3Q14657 143 aa14.1□□□□□ -0.15
RPAIN-210ENST00000571613 CSNK1G2-AS1Q8NCQ2 148 aa14.1□□□□□ -0.15
RPAIN-210ENST00000571613 SPATA3Q8NHX4 192 aa14.1□□□□□ -0.15
RPAIN-210ENST00000571613 C16orf74Q96GX8 76 aa14.1□□□□□ -0.15
RPAIN-210ENST00000571613 ST20Q9HBF5 79 aa14.1□□□□□ -0.15
RPAIN-210ENST00000571613 TRBV6-5A0A0K0K1A5 114 aa14.09□□□□□ -0.15
RPAIN-210ENST00000571613 C20orf202A1L168 122 aa14.09□□□□□ -0.15
RPAIN-210ENST00000571613 IGLL1P15814 213 aa14.09□□□□□ -0.15
RPAIN-210ENST00000571613 ORMDL2Q53FV1 153 aa14.09□□□□□ -0.15
RPAIN-210ENST00000571613 PRIMA1Q86XR5 153 aa14.09□□□□□ -0.15
RPAIN-210ENST00000571613 LGALS9BQ3B8N2 356 aa14.08□□□□□ -0.16
RPAIN-210ENST00000571613 ZNF705AQ6ZN79 300 aaPredicted RBP14.08□□□□□ -0.16
RPAIN-210ENST00000571613 IL17DQ8TAD2 202 aa14.08□□□□□ -0.16
RPAIN-210ENST00000571613 RPL39LQ96EH5 51 aaKnown RBP14.08□□□□□ -0.16
RPAIN-210ENST00000571613 ZMAT5Q9UDW3 170 aaKnown RBP14.08□□□□□ -0.16
RPAIN-210ENST00000571613 TEP1Q99973 2627 aaKnown RBP14.08□□□□□ -0.16
RPAIN-210ENST00000571613 KIR2DL5BA0A0G2JN68 375 aa14.07□□□□□ -0.16
RPAIN-210ENST00000571613 KIR2DL5BA0A0G2JPC4 375 aa14.07□□□□□ -0.16
RPAIN-210ENST00000571613 AZU1P20160 251 aa14.07□□□□□ -0.16
RPAIN-210ENST00000571613 G0S2P27469 103 aa14.07□□□□□ -0.16
RPAIN-210ENST00000571613 RRN3P1Q2M238 152 aa14.07□□□□□ -0.16
RPAIN-210ENST00000571613 PET117Q6UWS5 81 aa14.07□□□□□ -0.16
RPAIN-210ENST00000571613 KIR2DL5AQ8N109 375 aa14.07□□□□□ -0.16
RPAIN-210ENST00000571613 KIR2DL5BQ8NHK3 375 aa14.07□□□□□ -0.16
RPAIN-210ENST00000571613 A0A096LNJ9 63 aa14.07□□□□□ -0.16
RPAIN-210ENST00000571613 SYS1-DBNDD2H3BUS1 97 aa14.07□□□□□ -0.16
RPAIN-210ENST00000571613 M0QY20 66 aa14.07□□□□□ -0.16
RPAIN-210ENST00000571613 PRM2P04554 102 aa14.07□□□□□ -0.16
RPAIN-210ENST00000571613 DAZ2Q13117 558 aaKnown RBP14.07□□□□□ -0.16
RPAIN-210ENST00000571613 CDPF1Q6NVV7 123 aa14.07□□□□□ -0.16
RPAIN-210ENST00000571613 ATRQ13535 2644 aa14.06□□□□□ -0.16
RPAIN-210ENST00000571613 VCYO14598 125 aa14.06□□□□□ -0.16
RPAIN-210ENST00000571613 ZFP2Q6ZN57 461 aa14.06□□□□□ -0.16
RPAIN-210ENST00000571613 TEX43Q6ZNM6 134 aa14.06□□□□□ -0.16
RPAIN-210ENST00000571613 LINC01549A6NIU2 74 aa14.05□□□□□ -0.16
RPAIN-210ENST00000571613 RS1O15537 224 aa14.05□□□□□ -0.16
RPAIN-210ENST00000571613 APOC4P55056 127 aa14.05□□□□□ -0.16
RPAIN-210ENST00000571613 SPATA12Q7Z6I5 190 aa14.05□□□□□ -0.16
RPAIN-210ENST00000571613 NIPBLQ6KC79 2804 aaeCLIP14.05□□□□□ -0.16
RPAIN-210ENST00000571613 TCAPO15273 167 aa14.04□□□□□ -0.16
RPAIN-210ENST00000571613 POLR2KP53803 58 aaKnown RBP14.04□□□□□ -0.16
RPAIN-210ENST00000571613 CFAP126Q5VTH2 177 aa14.04□□□□□ -0.16
RPAIN-210ENST00000571613 UFSP1Q6NVU6 142 aa14.04□□□□□ -0.16
RPAIN-210ENST00000571613 Q8N976 141 aa14.04□□□□□ -0.16
RPAIN-210ENST00000571613 TSTD3H0UI37 97 aa14.04□□□□□ -0.16
RPAIN-210ENST00000571613 CIDEAO60543 219 aa14.04□□□□□ -0.16
RPAIN-210ENST00000571613 KIR2DL4Q99706 377 aa14.04□□□□□ -0.16
RPAIN-210ENST00000571613 MRPL16Q9NX20 251 aaKnown RBP14.04□□□□□ -0.16
RPAIN-210ENST00000571613 SMIM9A6NGZ8 99 aa14.03□□□□□ -0.16
RPAIN-210ENST00000571613 PKIAP61925 76 aa14.03□□□□□ -0.16
RPAIN-210ENST00000571613 TRGV1A0A0A0MS02 117 aa14.02□□□□□ -0.16
RPAIN-210ENST00000571613 PCP4L1A6NKN8 68 aa14.02□□□□□ -0.16
RPAIN-210ENST00000571613 ATP5LO75964 103 aa14.02□□□□□ -0.16
RPAIN-210ENST00000571613 NUDT3O95989 172 aa14.02□□□□□ -0.16
RPAIN-210ENST00000571613 LINC00173Q6ZV60 143 aa14.02□□□□□ -0.16
RPAIN-210ENST00000571613 IFI27L1Q96BM0 104 aa14.02□□□□□ -0.16
RPAIN-210ENST00000571613 TRBV27A0A0K0K1C4 114 aa14.01□□□□□ -0.17
RPAIN-210ENST00000571613 SDHAF1A6NFY7 115 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms