RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 SRIP30626 198 aa9.65□□□□□ -0.86
CIITA-205ENST00000571186 MEF2BQ02080 365 aaPredicted RBP9.65□□□□□ -0.86
CIITA-205ENST00000571186 PRR27Q6MZM9 219 aa9.65□□□□□ -0.86
CIITA-205ENST00000571186 JPT2Q9H910 190 aa9.65□□□□□ -0.86
CIITA-205ENST00000571186 IGLV5-52A0A0A0MRZ9 124 aa9.64□□□□□ -0.87
CIITA-205ENST00000571186 K7EQD1 137 aa9.64□□□□□ -0.87
CIITA-205ENST00000571186 IFNA1P01562 189 aa9.64□□□□□ -0.87
CIITA-205ENST00000571186 CRYGDP07320 174 aa9.64□□□□□ -0.87
CIITA-205ENST00000571186 GYPEP15421 78 aa9.64□□□□□ -0.87
CIITA-205ENST00000571186 LINC01559Q495D7 138 aa9.64□□□□□ -0.87
CIITA-205ENST00000571186 CENPWQ5EE01 88 aa9.64□□□□□ -0.87
CIITA-205ENST00000571186 PCNPQ8WW12 178 aaKnown RBP9.64□□□□□ -0.87
CIITA-205ENST00000571186 IL36BQ9NZH7 164 aa9.64□□□□□ -0.87
CIITA-205ENST00000571186 PSCAO43653 123 aa9.63□□□□□ -0.87
CIITA-205ENST00000571186 IGLV2-8P01709 118 aa9.63□□□□□ -0.87
CIITA-205ENST00000571186 GATA1P15976 413 aaPredicted RBP9.63□□□□□ -0.87
CIITA-205ENST00000571186 DNLZQ5SXM8 178 aa9.63□□□□□ -0.87
CIITA-205ENST00000571186 DMRTA1Q5VZB9 504 aa9.63□□□□□ -0.87
CIITA-205ENST00000571186 PTH2Q96A98 100 aa9.63□□□□□ -0.87
CIITA-205ENST00000571186 TMEM70Q9BUB7 260 aa9.63□□□□□ -0.87
CIITA-205ENST00000571186 MED9Q9NWA0 146 aa9.63□□□□□ -0.87
CIITA-205ENST00000571186 VAX2Q9UIW0 290 aa9.63□□□□□ -0.87
CIITA-205ENST00000571186 PDE6DO43924 150 aa9.62□□□□□ -0.87
CIITA-205ENST00000571186 MGST1P10620 155 aaKnown RBP9.62□□□□□ -0.87
CIITA-205ENST00000571186 BLOC1S1P78537 153 aa9.62□□□□□ -0.87
CIITA-205ENST00000571186 C10orf126Q8N4M7 172 aa9.62□□□□□ -0.87
CIITA-205ENST00000571186 SLC25A29Q8N8R3 303 aa9.62□□□□□ -0.87
CIITA-205ENST00000571186 TXNDC17Q9BRA2 123 aa9.62□□□□□ -0.87
CIITA-205ENST00000571186 SAMD10Q9BYL1 202 aa9.62□□□□□ -0.87
CIITA-205ENST00000571186 TRBV20OR9-2A0A075B6H5 130 aa9.61□□□□□ -0.87
CIITA-205ENST00000571186 PARLQ9H300 379 aa9.61□□□□□ -0.87
CIITA-205ENST00000571186 MUC21A0A0G2JKD1 596 aa9.6□□□□□ -0.87
CIITA-205ENST00000571186 MUC21A0A140T8X8 626 aa9.6□□□□□ -0.87
CIITA-205ENST00000571186 M0R381 172 aa9.6□□□□□ -0.87
CIITA-205ENST00000571186 GNG4P50150 75 aa9.6□□□□□ -0.87
CIITA-205ENST00000571186 LYPD6BQ8NI32 183 aa9.6□□□□□ -0.87
CIITA-205ENST00000571186 NTN5Q8WTR8 489 aaPredicted RBP9.6□□□□□ -0.87
CIITA-205ENST00000571186 PHLDA3Q9Y5J5 127 aa9.6□□□□□ -0.87
CIITA-205ENST00000571186 LRCOL1A6NCL2 159 aa9.59□□□□□ -0.87
CIITA-205ENST00000571186 RBFOX3A6NFN3 312 aa9.59□□□□□ -0.87
CIITA-205ENST00000571186 UFSP1Q6NVU6 142 aa9.59□□□□□ -0.87
CIITA-205ENST00000571186 SYT8Q8NBV8 401 aa9.59□□□□□ -0.87
CIITA-205ENST00000571186 FAM30AQ9NZY2 134 aa9.59□□□□□ -0.87
CIITA-205ENST00000571186 Q9UF83 564 aa9.59□□□□□ -0.87
CIITA-205ENST00000571186 A0A087WWL8 130 aa9.58□□□□□ -0.88
CIITA-205ENST00000571186 A8MWV9 139 aa9.58□□□□□ -0.88
CIITA-205ENST00000571186 GZMBP10144 247 aa9.58□□□□□ -0.88
CIITA-205ENST00000571186 SSTP61278 116 aa9.58□□□□□ -0.88
CIITA-205ENST00000571186 OR10AG1Q8NH19 301 aa9.58□□□□□ -0.88
CIITA-205ENST00000571186 IGHV3-38A0A0C4DH36 116 aa9.57□□□□□ -0.88
CIITA-205ENST00000571186 TRBV6-4A0A1B0GX49 114 aa9.57□□□□□ -0.88
CIITA-205ENST00000571186 C19orf71A6NCJ1 209 aa9.57□□□□□ -0.88
CIITA-205ENST00000571186 TAGLN2P37802 199 aaKnown RBP9.57□□□□□ -0.88
CIITA-205ENST00000571186 TOR2AQ5JU69 321 aa9.57□□□□□ -0.88
CIITA-205ENST00000571186 PIK3CD-AS1Q5SR53 167 aa9.57□□□□□ -0.88
CIITA-205ENST00000571186 FAM74A4Q5TZK3 123 aa9.57□□□□□ -0.88
CIITA-205ENST00000571186 C14orf178Q8N769 122 aaPredicted RBP9.57□□□□□ -0.88
CIITA-205ENST00000571186 SFRP2Q96HF1 295 aa9.57□□□□□ -0.88
CIITA-205ENST00000571186 PRADC1Q9BSG0 188 aa9.57□□□□□ -0.88
CIITA-205ENST00000571186 Q9HAA7 133 aa9.57□□□□□ -0.88
CIITA-205ENST00000571186 CIDEAO60543 219 aa9.56□□□□□ -0.88
CIITA-205ENST00000571186 PLA2G1BP04054 148 aaKnown RBP9.56□□□□□ -0.88
CIITA-205ENST00000571186 CXCL1P09341 107 aa9.56□□□□□ -0.88
CIITA-205ENST00000571186 CEBPGP53567 150 aa9.56□□□□□ -0.88
CIITA-205ENST00000571186 RHOHQ15669 191 aa9.56□□□□□ -0.88
CIITA-205ENST00000571186 ZFP2Q6ZN57 461 aa9.56□□□□□ -0.88
CIITA-205ENST00000571186 SH2D6Q7Z4S9 175 aa9.56□□□□□ -0.88
CIITA-205ENST00000571186 ZFP82Q8N141 532 aa9.56□□□□□ -0.88
CIITA-205ENST00000571186 Q8N814 137 aa9.56□□□□□ -0.88
CIITA-205ENST00000571186 DAZAP1Q96EP5 407 aaKnown RBP9.56□□□□□ -0.88
CIITA-205ENST00000571186 GAGE12JA6NER3 117 aa9.55□□□□□ -0.88
CIITA-205ENST00000571186 IBA57-AS1B1ANH7 110 aa9.55□□□□□ -0.88
CIITA-205ENST00000571186 K7EN84 100 aa9.55□□□□□ -0.88
CIITA-205ENST00000571186 SNAI2O43623 268 aa9.55□□□□□ -0.88
CIITA-205ENST00000571186 GAGE1Q13065 139 aa9.55□□□□□ -0.88
CIITA-205ENST00000571186 GAGE4Q13068 117 aa9.55□□□□□ -0.88
CIITA-205ENST00000571186 GAGE5Q13069 117 aa9.55□□□□□ -0.88
CIITA-205ENST00000571186 GAGE13Q4V321 117 aa9.55□□□□□ -0.88
CIITA-205ENST00000571186 OR2D3Q8NGH3 330 aa9.55□□□□□ -0.88
CIITA-205ENST00000571186 OCC1Q8TAD7 63 aa9.55□□□□□ -0.88
CIITA-205ENST00000571186 SSBP4Q9BWG4 385 aaPredicted RBP9.55□□□□□ -0.88
CIITA-205ENST00000571186 LINC01556Q5JQF7 62 aa9.54□□□□□ -0.88
CIITA-205ENST00000571186 SMIM12Q96EX1 92 aa9.54□□□□□ -0.88
CIITA-205ENST00000571186 TPPP3Q9BW30 176 aa9.54□□□□□ -0.88
CIITA-205ENST00000571186 EIF5A2Q9GZV4 153 aaKnown RBP9.54□□□□□ -0.88
CIITA-205ENST00000571186 DNAH8Q96JB1 4490 aa9.54□□□□□ -0.88
CIITA-205ENST00000571186 TRAV8-6A0A0B4J262 113 aa9.53□□□□□ -0.88
CIITA-205ENST00000571186 KRTAP29-1A8MX34 341 aaPredicted RBP9.53□□□□□ -0.88
CIITA-205ENST00000571186 P01737 135 aa9.53□□□□□ -0.88
CIITA-205ENST00000571186 IGHV3-30P01768 117 aa9.53□□□□□ -0.88
CIITA-205ENST00000571186 IGHV3-33P01772 117 aa9.53□□□□□ -0.88
CIITA-205ENST00000571186 OR5AL1P0C617 328 aa9.53□□□□□ -0.88
CIITA-205ENST00000571186 IGHV3-30-3P0DP02 117 aa9.53□□□□□ -0.88
CIITA-205ENST00000571186 IGHV3-30-5P0DP03 117 aa9.53□□□□□ -0.88
CIITA-205ENST00000571186 TIRAPP58753 221 aa9.53□□□□□ -0.88
CIITA-205ENST00000571186 OR10J3Q5JRS4 329 aa9.53□□□□□ -0.88
CIITA-205ENST00000571186 TEX261Q6UWH6 196 aa9.53□□□□□ -0.88
CIITA-205ENST00000571186 NUDT10Q8NFP7 164 aa9.53□□□□□ -0.88
CIITA-205ENST00000571186 NUDT11Q96G61 164 aa9.53□□□□□ -0.88
CIITA-205ENST00000571186 FAM210AQ96ND0 272 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms