RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 Q8N8P6 123 aa12.74□□□□□ -0.37
RPAIN-208ENST00000571043 C20orf144Q9BQM9 153 aa12.74□□□□□ -0.37
RPAIN-208ENST00000571043 C20orf202A1L168 122 aa12.73□□□□□ -0.37
RPAIN-208ENST00000571043 SPRY2O43597 315 aa12.73□□□□□ -0.37
RPAIN-208ENST00000571043 HBDP02042 147 aa12.73□□□□□ -0.37
RPAIN-208ENST00000571043 C14orf178Q8N769 122 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-208ENST00000571043 DNHD1Q96M86 4753 aa12.73□□□□□ -0.37
RPAIN-208ENST00000571043 ODF3L2Q3SX64 289 aa12.72□□□□□ -0.37
RPAIN-208ENST00000571043 SYT8Q8NBV8 401 aa12.72□□□□□ -0.37
RPAIN-208ENST00000571043 KIF25-AS1Q9Y6Z4 181 aa12.72□□□□□ -0.37
RPAIN-208ENST00000571043 IGLV2-18A0A075B6J9 118 aa12.72□□□□□ -0.37
RPAIN-208ENST00000571043 TRAV26-2A0A0B4J265 109 aa12.72□□□□□ -0.37
RPAIN-208ENST00000571043 PPP1R17O96001 155 aa12.72□□□□□ -0.37
RPAIN-208ENST00000571043 ZNF124Q15973 351 aa12.72□□□□□ -0.37
RPAIN-208ENST00000571043 SPATA12Q7Z6I5 190 aa12.72□□□□□ -0.37
RPAIN-208ENST00000571043 MDFICQ9P1T7 246 aa12.72□□□□□ -0.37
RPAIN-208ENST00000571043 SMIM17P0DL12 118 aa12.71□□□□□ -0.38
RPAIN-208ENST00000571043 FXYD7P58549 80 aa12.71□□□□□ -0.38
RPAIN-208ENST00000571043 C20orf78Q9BR46 151 aa12.71□□□□□ -0.38
RPAIN-208ENST00000571043 LINC00467Q9BRT7 94 aa12.71□□□□□ -0.38
RPAIN-208ENST00000571043 MCRIP2Q9BUT9 160 aaKnown RBP12.71□□□□□ -0.38
RPAIN-208ENST00000571043 OR11H12B2RN74 326 aa12.7□□□□□ -0.38
RPAIN-208ENST00000571043 SAP30O75446 220 aa12.7□□□□□ -0.38
RPAIN-208ENST00000571043 IGLV1-51P01701 117 aa12.7□□□□□ -0.38
RPAIN-208ENST00000571043 RBMY1A1P0DJD3 496 aaKnown RBP12.7□□□□□ -0.38
RPAIN-208ENST00000571043 RBMY1CP0DJD4 496 aa12.7□□□□□ -0.38
RPAIN-208ENST00000571043 FCER1GP30273 86 aa12.7□□□□□ -0.38
RPAIN-208ENST00000571043 LINC00315P59091 139 aa12.7□□□□□ -0.38
RPAIN-208ENST00000571043 RBMY1FQ15415 496 aaKnown RBP12.7□□□□□ -0.38
RPAIN-208ENST00000571043 PAM16Q9Y3D7 125 aa12.7□□□□□ -0.38
RPAIN-208ENST00000571043 CBY3A6NI87 242 aa12.69□□□□□ -0.38
RPAIN-208ENST00000571043 MGPP08493 103 aa12.69□□□□□ -0.38
RPAIN-208ENST00000571043 INSL3P51460 131 aa12.69□□□□□ -0.38
RPAIN-208ENST00000571043 RASL10AQ92737 203 aa12.69□□□□□ -0.38
RPAIN-208ENST00000571043 FAM110AQ9BQ89 295 aa12.69□□□□□ -0.38
RPAIN-208ENST00000571043 DEFA6Q01524 100 aa12.68□□□□□ -0.38
RPAIN-208ENST00000571043 C9orf66Q5T8R8 295 aa12.68□□□□□ -0.38
RPAIN-208ENST00000571043 NDUFAF3Q9BU61 184 aa12.68□□□□□ -0.38
RPAIN-208ENST00000571043 TRAV9-2A0A087WT02 112 aa12.67□□□□□ -0.38
RPAIN-208ENST00000571043 SPATA45Q537H7 98 aa12.67□□□□□ -0.38
RPAIN-208ENST00000571043 LINC01545Q5VT33 79 aa12.67□□□□□ -0.38
RPAIN-208ENST00000571043 STHQ8IWL8 128 aa12.67□□□□□ -0.38
RPAIN-208ENST00000571043 SMIM2Q9BVW6 85 aa12.67□□□□□ -0.38
RPAIN-208ENST00000571043 K7EMI3 77 aa12.67□□□□□ -0.38
RPAIN-208ENST00000571043 INSP01308 110 aa12.67□□□□□ -0.38
RPAIN-208ENST00000571043 SUMO2P61956 95 aaKnown RBP12.67□□□□□ -0.38
RPAIN-208ENST00000571043 WIPF1O43516 503 aa12.66□□□□□ -0.38
RPAIN-208ENST00000571043 IGLL1P15814 213 aa12.66□□□□□ -0.38
RPAIN-208ENST00000571043 RPL32P62910 135 aaKnown RBP12.66□□□□□ -0.38
RPAIN-208ENST00000571043 LAGE3Q14657 143 aa12.66□□□□□ -0.38
RPAIN-208ENST00000571043 ZNF705AQ6ZN79 300 aaPredicted RBP12.66□□□□□ -0.38
RPAIN-208ENST00000571043 TRPT1Q86TN4 253 aaKnown RBP12.66□□□□□ -0.38
RPAIN-208ENST00000571043 PTH2Q96A98 100 aa12.66□□□□□ -0.38
RPAIN-208ENST00000571043 MIEN1Q9BRT3 115 aa12.66□□□□□ -0.38
RPAIN-208ENST00000571043 MGAM2Q2M2H8 2515 aa12.66□□□□□ -0.38
RPAIN-208ENST00000571043 BEAN1Q3B7T3 259 aa12.65□□□□□ -0.38
RPAIN-208ENST00000571043 PIK3CD-AS1Q5SR53 167 aa12.65□□□□□ -0.38
RPAIN-208ENST00000571043 ATOH7Q8N100 152 aa12.65□□□□□ -0.38
RPAIN-208ENST00000571043 IFI27L1Q96BM0 104 aa12.65□□□□□ -0.38
RPAIN-208ENST00000571043 JPT2Q9H910 190 aa12.65□□□□□ -0.38
RPAIN-208ENST00000571043 RPL39LQ96EH5 51 aaKnown RBP12.64□□□□□ -0.39
RPAIN-208ENST00000571043 C14orf144Q96I85 54 aa12.64□□□□□ -0.39
RPAIN-208ENST00000571043 CRYGDP07320 174 aa12.63□□□□□ -0.39
RPAIN-208ENST00000571043 NUTF2P61970 127 aaKnown RBP12.63□□□□□ -0.39
RPAIN-208ENST00000571043 ZNF415Q09FC8 603 aa12.63□□□□□ -0.39
RPAIN-208ENST00000571043 LGALS9BQ3B8N2 356 aa12.63□□□□□ -0.39
RPAIN-208ENST00000571043 ZNF876PQ49A33 203 aa12.63□□□□□ -0.39
RPAIN-208ENST00000571043 LGALS9CQ6DKI2 356 aa12.63□□□□□ -0.39
RPAIN-208ENST00000571043 SUMO4Q6EEV6 95 aa12.63□□□□□ -0.39
RPAIN-208ENST00000571043 LINC01587Q99440 93 aa12.63□□□□□ -0.39
RPAIN-208ENST00000571043 DNAH3Q8TD57 4116 aa12.63□□□□□ -0.39
RPAIN-208ENST00000571043 A0A087WWL8 130 aa12.62□□□□□ -0.39
RPAIN-208ENST00000571043 ORMDL2Q53FV1 153 aa12.62□□□□□ -0.39
RPAIN-208ENST00000571043 TCAPO15273 167 aa12.62□□□□□ -0.39
RPAIN-208ENST00000571043 TRBV6-5A0A0K0K1A5 114 aa12.61□□□□□ -0.39
RPAIN-208ENST00000571043 F5H697 171 aa12.61□□□□□ -0.39
RPAIN-208ENST00000571043 H0Y8G0 127 aa12.61□□□□□ -0.39
RPAIN-208ENST00000571043 M0R2P5 195 aa12.61□□□□□ -0.39
RPAIN-208ENST00000571043 ATP5LO75964 103 aa12.61□□□□□ -0.39
RPAIN-208ENST00000571043 IGLC3P0DOY3 106 aa12.61□□□□□ -0.39
RPAIN-208ENST00000571043 OXLD1Q5BKU9 147 aa12.61□□□□□ -0.39
RPAIN-208ENST00000571043 SPXQ9BT56 116 aa12.61□□□□□ -0.39
RPAIN-208ENST00000571043 ST20Q9HBF5 79 aa12.61□□□□□ -0.39
RPAIN-208ENST00000571043 C19orf73Q9NVV2 129 aa12.61□□□□□ -0.39
RPAIN-208ENST00000571043 UQCR10Q9UDW1 63 aa12.61□□□□□ -0.39
RPAIN-208ENST00000571043 NBEAL1Q6ZS30 2694 aa12.6□□□□□ -0.39
RPAIN-208ENST00000571043 HSBP1L1C9JCN9 74 aa12.6□□□□□ -0.39
RPAIN-208ENST00000571043 HTN1P15515 57 aa12.6□□□□□ -0.39
RPAIN-208ENST00000571043 MAJINQ3KP22 176 aa12.6□□□□□ -0.39
RPAIN-208ENST00000571043 XCL2Q9UBD3 114 aa12.6□□□□□ -0.39
RPAIN-208ENST00000571043 NOTCH1P46531 2555 aa12.6□□□□□ -0.39
RPAIN-208ENST00000571043 NUDT3O95989 172 aa12.59□□□□□ -0.39
RPAIN-208ENST00000571043 POLR2KP53803 58 aaKnown RBP12.59□□□□□ -0.39
RPAIN-208ENST00000571043 FAM74A4Q5TZK3 123 aa12.59□□□□□ -0.39
RPAIN-208ENST00000571043 C11orf72Q8NBR9 251 aa12.59□□□□□ -0.39
RPAIN-208ENST00000571043 CSTL1Q9H114 145 aa12.59□□□□□ -0.39
RPAIN-208ENST00000571043 A8MWV9 139 aa12.58□□□□□ -0.4
RPAIN-208ENST00000571043 ZNF56Q15929 161 aa12.58□□□□□ -0.4
RPAIN-208ENST00000571043 C1orf158Q8N1D5 194 aa12.58□□□□□ -0.4
RPAIN-208ENST00000571043 EDA2RQ9HAV5 297 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 216.9 ms