RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 GAGE1Q13065 139 aa4.31□□□□□ -1.72
SMG6-204ENST00000570606 GAGE4Q13068 117 aa4.31□□□□□ -1.72
SMG6-204ENST00000570606 GAGE5Q13069 117 aa4.31□□□□□ -1.72
SMG6-204ENST00000570606 WFDC2Q14508 124 aa4.31□□□□□ -1.72
SMG6-204ENST00000570606 LGALSLQ3ZCW2 172 aaPredicted RBP4.31□□□□□ -1.72
SMG6-204ENST00000570606 SMUG1Q53HV7 270 aa4.31□□□□□ -1.72
SMG6-204ENST00000570606 DPPA3Q6W0C5 159 aa4.31□□□□□ -1.72
SMG6-204ENST00000570606 OR10G9Q8NGN4 311 aa4.31□□□□□ -1.72
SMG6-204ENST00000570606 OR10G7Q8NGN6 311 aa4.31□□□□□ -1.72
SMG6-204ENST00000570606 C9orf85Q96MD7 179 aa4.31□□□□□ -1.72
SMG6-204ENST00000570606 GGTLC3B5MD39 225 aa4.3□□□□□ -1.72
SMG6-204ENST00000570606 TCRAP04437 139 aa4.3□□□□□ -1.72
SMG6-204ENST00000570606 CAMPP49913 170 aa4.3□□□□□ -1.72
SMG6-204ENST00000570606 ZNF80P51504 273 aaPredicted RBP4.3□□□□□ -1.72
SMG6-204ENST00000570606 LINC00299Q6ZSB3 139 aa4.3□□□□□ -1.72
SMG6-204ENST00000570606 PRNTQ86SH4 94 aa4.3□□□□□ -1.72
SMG6-204ENST00000570606 CYB561D1Q8N8Q1 229 aa4.3□□□□□ -1.72
SMG6-204ENST00000570606 HSD17B11Q8NBQ5 300 aa4.3□□□□□ -1.72
SMG6-204ENST00000570606 PRSS3P2Q8NHM4 247 aa4.3□□□□□ -1.72
SMG6-204ENST00000570606 MPLKIPQ8TAP9 179 aa4.3□□□□□ -1.72
SMG6-204ENST00000570606 RMI2Q96E14 147 aa4.3□□□□□ -1.72
SMG6-204ENST00000570606 PARLQ9H300 379 aa4.3□□□□□ -1.72
SMG6-204ENST00000570606 WFDC1Q9HC57 220 aa4.3□□□□□ -1.72
SMG6-204ENST00000570606 C11orf21Q9P2W6 132 aa4.3□□□□□ -1.72
SMG6-204ENST00000570606 PSG8Q9UQ74 426 aa4.3□□□□□ -1.72
SMG6-204ENST00000570606 URGCP-MRPS24S4R325 110 aa4.3□□□□□ -1.72
SMG6-204ENST00000570606 IGKV2D-24A0A075B6R9 120 aa4.29□□□□□ -1.72
SMG6-204ENST00000570606 RBFOX3A6NFN3 312 aa4.29□□□□□ -1.72
SMG6-204ENST00000570606 A8MWV9 139 aa4.29□□□□□ -1.72
SMG6-204ENST00000570606 SEC11BP0C7V7 166 aa4.29□□□□□ -1.72
SMG6-204ENST00000570606 STAG3L2P0CL84 134 aa4.29□□□□□ -1.72
SMG6-204ENST00000570606 STAG3L3P0CL85 134 aa4.29□□□□□ -1.72
SMG6-204ENST00000570606 RNASE3P12724 160 aaKnown RBP4.29□□□□□ -1.72
SMG6-204ENST00000570606 GCHFRP30047 84 aa4.29□□□□□ -1.72
SMG6-204ENST00000570606 ASIPP42127 132 aa4.29□□□□□ -1.72
SMG6-204ENST00000570606 DEFA1P59665 94 aa4.29□□□□□ -1.72
SMG6-204ENST00000570606 DEFA3P59666 94 aa4.29□□□□□ -1.72
SMG6-204ENST00000570606 FLI1Q01543 452 aaPredicted RBP4.29□□□□□ -1.72
SMG6-204ENST00000570606 Q6ZSA8 131 aa4.29□□□□□ -1.72
SMG6-204ENST00000570606 DAZ4Q86SG3 579 aaKnown RBP4.29□□□□□ -1.72
SMG6-204ENST00000570606 OR2T35Q8NGX2 323 aa4.29□□□□□ -1.72
SMG6-204ENST00000570606 OR2G3Q8NGZ4 309 aa4.29□□□□□ -1.72
SMG6-204ENST00000570606 PTH2Q96A98 100 aa4.29□□□□□ -1.72
SMG6-204ENST00000570606 DAZ3Q9NR90 486 aaKnown RBP4.29□□□□□ -1.72
SMG6-204ENST00000570606 TMEM167BQ9NRX6 74 aa4.29□□□□□ -1.72
SMG6-204ENST00000570606 PKHD1L1Q86WI1 4243 aa4.29□□□□□ -1.72
SMG6-204ENST00000570606 A0A087WWC5 75 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 B4DEV8 164 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 H3BVH4 76 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 IFNA7P01567 189 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 MBP02144 154 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 LINC00694P0DN24 101 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 FGF8P55075 233 aaPredicted RBP4.28□□□□□ -1.72
SMG6-204ENST00000570606 LINC01620Q4KN68 170 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 SAPCD1Q5SSQ6 148 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 LCE5AQ5TCM9 118 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 FAM74A4Q5TZK3 123 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 KCNIP4Q6PIL6 250 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 ZFP2Q6ZN57 461 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 SCXQ7RTU7 201 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 Q86TA4 180 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 C14orf178Q8N769 122 aaPredicted RBP4.28□□□□□ -1.72
SMG6-204ENST00000570606 DEFB104AQ8WTQ1 72 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 BAALCQ8WXS3 180 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 MARVELD1Q9BSK0 173 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 EPDR1Q9UM22 224 aa4.28□□□□□ -1.72
SMG6-204ENST00000570606 A0A087WX48 190 aa4.27□□□□□ -1.73
SMG6-204ENST00000570606 TRAV34A0A0B4J273 112 aa4.27□□□□□ -1.73
SMG6-204ENST00000570606 KRTAP29-1A8MX34 341 aaPredicted RBP4.27□□□□□ -1.73
SMG6-204ENST00000570606 CXorf1O96002 111 aa4.27□□□□□ -1.73
SMG6-204ENST00000570606 IGLV2-11P01706 119 aa4.27□□□□□ -1.73
SMG6-204ENST00000570606 ATP6V0CP27449 155 aa4.27□□□□□ -1.73
SMG6-204ENST00000570606 IFITM3Q01628 133 aa4.27□□□□□ -1.73
SMG6-204ENST00000570606 Q8N976 141 aa4.27□□□□□ -1.73
SMG6-204ENST00000570606 OR11H4Q8NGC9 324 aa4.27□□□□□ -1.73
SMG6-204ENST00000570606 SUN5Q8TC36 379 aa4.27□□□□□ -1.73
SMG6-204ENST00000570606 UBE2WQ96B02 151 aa4.27□□□□□ -1.73
SMG6-204ENST00000570606 PSMG3Q9BT73 122 aaPredicted RBP4.27□□□□□ -1.73
SMG6-204ENST00000570606 SAMD10Q9BYL1 202 aa4.27□□□□□ -1.73
SMG6-204ENST00000570606 ACTR3CQ9C0K3 210 aaPredicted RBP4.27□□□□□ -1.73
SMG6-204ENST00000570606 JPT2Q9H910 190 aa4.27□□□□□ -1.73
SMG6-204ENST00000570606 KLK12Q9UKR0 248 aa4.27□□□□□ -1.73
SMG6-204ENST00000570606 ARL2-SNX15V9GYD0 113 aa4.27□□□□□ -1.73
SMG6-204ENST00000570606 FAT3Q8TDW7 4589 aa4.27□□□□□ -1.73
SMG6-204ENST00000570606 LRP1Q07954 4544 aaKnown RBP4.27□□□□□ -1.73
SMG6-204ENST00000570606 IGKV3D-20A0A0C4DH25 116 aa4.26□□□□□ -1.73
SMG6-204ENST00000570606 FABP5P3A8MUU1 101 aa4.26□□□□□ -1.73
SMG6-204ENST00000570606 M0R036 132 aa4.26□□□□□ -1.73
SMG6-204ENST00000570606 M0R381 172 aa4.26□□□□□ -1.73
SMG6-204ENST00000570606 PEX7O00628 323 aa4.26□□□□□ -1.73
SMG6-204ENST00000570606 VCYO14598 125 aa4.26□□□□□ -1.73
SMG6-204ENST00000570606 CRPP02741 224 aa4.26□□□□□ -1.73
SMG6-204ENST00000570606 UBE2G2P60604 165 aa4.26□□□□□ -1.73
SMG6-204ENST00000570606 SERF2P84101 59 aa4.26□□□□□ -1.73
SMG6-204ENST00000570606 ELOBQ15370 118 aa4.26□□□□□ -1.73
SMG6-204ENST00000570606 NIT1Q86X76 327 aa4.26□□□□□ -1.73
SMG6-204ENST00000570606 URB1-AS1Q96HZ7 61 aa4.26□□□□□ -1.73
SMG6-204ENST00000570606 LINC00479Q96M42 142 aa4.26□□□□□ -1.73
SMG6-204ENST00000570606 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
SMG6-204ENST00000570606 IL36BQ9NZH7 164 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms