RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-218	ENST00000569732	IGHV3-16	A0A0C4DH30	117 aa		4.98	□□□□□ -1.61
CNOT1-218	ENST00000569732	TEX48	A0A1B0GUV7	120 aa		4.98	□□□□□ -1.61
CNOT1-218	ENST00000569732	TMEM189	A5PLL7	270 aa		4.98	□□□□□ -1.61
CNOT1-218	ENST00000569732		C9JCJ5	164 aa		4.98	□□□□□ -1.61
CNOT1-218	ENST00000569732		K7EN84	100 aa		4.98	□□□□□ -1.61
CNOT1-218	ENST00000569732	SH2D1A	O60880	128 aa		4.98	□□□□□ -1.61
CNOT1-218	ENST00000569732	TYMS	P04818	313 aa		4.98	□□□□□ -1.61
CNOT1-218	ENST00000569732	SPART-AS1	P0CW21	52 aa		4.98	□□□□□ -1.61
CNOT1-218	ENST00000569732	MUC21	Q5SSG8	566 aa		4.98	□□□□□ -1.61
CNOT1-218	ENST00000569732	ZNF493	Q6ZR52	646 aa		4.98	□□□□□ -1.61
CNOT1-218	ENST00000569732	EIF4E3	Q8N5X7	224 aa	Known RBP	4.98	□□□□□ -1.61
CNOT1-218	ENST00000569732	LINC00612	Q8N6U2	182 aa		4.98	□□□□□ -1.61
CNOT1-218	ENST00000569732	SMIM12	Q96EX1	92 aa		4.98	□□□□□ -1.61
CNOT1-218	ENST00000569732	C16orf74	Q96GX8	76 aa		4.98	□□□□□ -1.61
CNOT1-218	ENST00000569732	EIF5A2	Q9GZV4	153 aa	Known RBP	4.98	□□□□□ -1.61
CNOT1-218	ENST00000569732	SMDT1	Q9H4I9	107 aa		4.98	□□□□□ -1.61
CNOT1-218	ENST00000569732	C19orf71	A6NCJ1	209 aa		4.97	□□□□□ -1.61
CNOT1-218	ENST00000569732	FABP5P3	A8MUU1	101 aa		4.97	□□□□□ -1.61
CNOT1-218	ENST00000569732	KRBOX1	C9JBD0	128 aa		4.97	□□□□□ -1.61
CNOT1-218	ENST00000569732	GNRH2	O43555	120 aa		4.97	□□□□□ -1.61
CNOT1-218	ENST00000569732	GNG4	P50150	75 aa		4.97	□□□□□ -1.61
CNOT1-218	ENST00000569732	TCL1A	P56279	114 aa		4.97	□□□□□ -1.61
CNOT1-218	ENST00000569732	RAB14	P61106	215 aa		4.97	□□□□□ -1.61
CNOT1-218	ENST00000569732	DAZ2	Q13117	558 aa	Known RBP	4.97	□□□□□ -1.61
CNOT1-218	ENST00000569732	IBA57	Q5T440	356 aa	Known RBP	4.97	□□□□□ -1.61
CNOT1-218	ENST00000569732	FAM162B	Q5T6X4	162 aa		4.97	□□□□□ -1.61
CNOT1-218	ENST00000569732	FAM222A	Q5U5X8	452 aa		4.97	□□□□□ -1.61
CNOT1-218	ENST00000569732	KRTAP4-9	Q9BYQ8	210 aa		4.97	□□□□□ -1.61
CNOT1-218	ENST00000569732	GSN-AS1	Q9NRJ2	163 aa		4.97	□□□□□ -1.61
CNOT1-218	ENST00000569732	MDFIC	Q9P1T7	246 aa		4.97	□□□□□ -1.61
CNOT1-218	ENST00000569732	LINC00862	A6NCI5	91 aa		4.96	□□□□□ -1.62
CNOT1-218	ENST00000569732	LYRM9	A8MSI8	78 aa		4.96	□□□□□ -1.62
CNOT1-218	ENST00000569732	SPINK4	O60575	86 aa		4.96	□□□□□ -1.62
CNOT1-218	ENST00000569732	RNASE3	P12724	160 aa	Known RBP	4.96	□□□□□ -1.62
CNOT1-218	ENST00000569732	HTN1	P15515	57 aa		4.96	□□□□□ -1.62
CNOT1-218	ENST00000569732	EMP1	P54849	157 aa		4.96	□□□□□ -1.62
CNOT1-218	ENST00000569732	PEA15	Q15121	130 aa		4.96	□□□□□ -1.62
CNOT1-218	ENST00000569732	DNLZ	Q5SXM8	178 aa		4.96	□□□□□ -1.62
CNOT1-218	ENST00000569732	FAM159A	Q6UWV7	190 aa		4.96	□□□□□ -1.62
CNOT1-218	ENST00000569732	C6orf223	Q8N319	242 aa		4.96	□□□□□ -1.62
CNOT1-218	ENST00000569732	NRAC	Q8N912	160 aa		4.96	□□□□□ -1.62
CNOT1-218	ENST00000569732	OCC1	Q8TAD7	63 aa		4.96	□□□□□ -1.62
CNOT1-218	ENST00000569732	C9orf85	Q96MD7	179 aa		4.96	□□□□□ -1.62
CNOT1-218	ENST00000569732	NAGK	Q9UJ70	344 aa		4.96	□□□□□ -1.62
CNOT1-218	ENST00000569732	LY96	Q9Y6Y9	160 aa		4.96	□□□□□ -1.62
CNOT1-218	ENST00000569732	hDV102S1	A0JD36	115 aa		4.95	□□□□□ -1.62
CNOT1-218	ENST00000569732	CXCL1	P09341	107 aa		4.95	□□□□□ -1.62
CNOT1-218	ENST00000569732	AMT	P48728	403 aa		4.95	□□□□□ -1.62
CNOT1-218	ENST00000569732	RPL19	P84098	196 aa	Known RBP	4.95	□□□□□ -1.62
CNOT1-218	ENST00000569732	ZNF415	Q09FC8	603 aa		4.95	□□□□□ -1.62
CNOT1-218	ENST00000569732	OR5I1	Q13606	314 aa		4.95	□□□□□ -1.62
CNOT1-218	ENST00000569732		Q6ZTI0	123 aa		4.95	□□□□□ -1.62
CNOT1-218	ENST00000569732	LINC01551	Q86U37	167 aa		4.95	□□□□□ -1.62
CNOT1-218	ENST00000569732	C15orf53	Q8NAA6	179 aa		4.95	□□□□□ -1.62
CNOT1-218	ENST00000569732	KCNS1	Q96KK3	526 aa		4.95	□□□□□ -1.62
CNOT1-218	ENST00000569732	C18orf15	Q96N68	181 aa		4.95	□□□□□ -1.62
CNOT1-218	ENST00000569732	SMIM7	Q9BQ49	75 aa		4.95	□□□□□ -1.62
CNOT1-218	ENST00000569732	SDF2L1	Q9HCN8	221 aa		4.95	□□□□□ -1.62
CNOT1-218	ENST00000569732	NOP10	Q9NPE3	64 aa	Known RBP	4.95	□□□□□ -1.62
CNOT1-218	ENST00000569732	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.95	□□□□□ -1.62
CNOT1-218	ENST00000569732	TMSB15B	A0A087X1C1	80 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	NBDY	A0A0U1RRE5	68 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	GRIFIN	A4D1Z8	144 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	ZNF727	A8MUV8	499 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	EPM2A	B3EWF7	344 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732		B4DEV8	164 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732		M0R036	132 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	SFTA3	P0C7M3	94 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	MGST1	P10620	155 aa	Known RBP	4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	ADCYAP1	P18509	176 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	CEBPG	P53567	150 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	RPL23	P62829	140 aa	Known RBP	4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	TWIST1	Q15672	202 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	FAM74A3	Q4VXF1	159 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	PRR27	Q6MZM9	219 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	UQCC3	Q6UW78	93 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	FAM231D	Q6ZW35	169 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	COMMD7	Q86VX2	200 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	NEXN-AS1	Q8NBZ9	246 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	RASL10A	Q92737	203 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	PTH2	Q96A98	100 aa		4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	RNASE7	Q9H1E1	156 aa	Known RBP	4.94	□□□□□ -1.62
CNOT1-218	ENST00000569732	SNURFL	B1AK76	121 aa		4.93	□□□□□ -1.62
CNOT1-218	ENST00000569732	SNAI2	O43623	268 aa		4.93	□□□□□ -1.62
CNOT1-218	ENST00000569732	NXPH4	O95158	308 aa		4.93	□□□□□ -1.62
CNOT1-218	ENST00000569732	ORM1	P02763	201 aa		4.93	□□□□□ -1.62
CNOT1-218	ENST00000569732	IGLC6	P0CF74	106 aa		4.93	□□□□□ -1.62
CNOT1-218	ENST00000569732	VPREB1	P12018	145 aa		4.93	□□□□□ -1.62
CNOT1-218	ENST00000569732	ASIP	P42127	132 aa		4.93	□□□□□ -1.62
CNOT1-218	ENST00000569732	PAPPA-AS1	Q5QFB9	102 aa		4.93	□□□□□ -1.62
CNOT1-218	ENST00000569732	WDR73	Q6P4I2	378 aa		4.93	□□□□□ -1.62
CNOT1-218	ENST00000569732	SPATA12	Q7Z6I5	190 aa		4.93	□□□□□ -1.62
CNOT1-218	ENST00000569732	ISOC2	Q96AB3	205 aa		4.93	□□□□□ -1.62
CNOT1-218	ENST00000569732	SPX	Q9BT56	116 aa		4.93	□□□□□ -1.62
CNOT1-218	ENST00000569732	MRPL16	Q9NX20	251 aa	Known RBP	4.93	□□□□□ -1.62
CNOT1-218	ENST00000569732	IL36B	Q9NZH7	164 aa		4.93	□□□□□ -1.62
CNOT1-218	ENST00000569732	NAT8	Q9UHE5	227 aa		4.93	□□□□□ -1.62
CNOT1-218	ENST00000569732	TRGV1	A0A0A0MS02	117 aa		4.92	□□□□□ -1.62
CNOT1-218	ENST00000569732	TMEM218	A2RU14	115 aa		4.92	□□□□□ -1.62
CNOT1-218	ENST00000569732		H3BVH4	76 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms