RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 H3BUX3 64 aa12.9□□□□□ -0.34
VAC14-210ENST00000568548 RHPN1-AS1Q9BWJ2 59 aa12.9□□□□□ -0.34
VAC14-210ENST00000568548 DPH3P1Q9H4G8 78 aa12.9□□□□□ -0.34
VAC14-210ENST00000568548 TP53TG1Q9Y2A0 90 aa12.89□□□□□ -0.35
VAC14-210ENST00000568548 DOPEY1Q5JWR5 2465 aa12.89□□□□□ -0.35
VAC14-210ENST00000568548 RNASE3P12724 160 aaKnown RBP12.89□□□□□ -0.35
VAC14-210ENST00000568548 ORMDL2Q53FV1 153 aa12.89□□□□□ -0.35
VAC14-210ENST00000568548 HIST2H2BDQ6DRA6 164 aa12.89□□□□□ -0.35
VAC14-210ENST00000568548 CLEC2AQ6UVW9 174 aa12.89□□□□□ -0.35
VAC14-210ENST00000568548 DUX5Q96PT3 197 aa12.89□□□□□ -0.35
VAC14-210ENST00000568548 TRAV21A0A0B4J279 112 aa12.89□□□□□ -0.35
VAC14-210ENST00000568548 MORN3Q6PF18 240 aaPredicted RBP12.89□□□□□ -0.35
VAC14-210ENST00000568548 IGHV4-61A0A0C4DH41 118 aa12.88□□□□□ -0.35
VAC14-210ENST00000568548 C11orf86A6NJI1 115 aa12.88□□□□□ -0.35
VAC14-210ENST00000568548 F8W1H4 67 aa12.88□□□□□ -0.35
VAC14-210ENST00000568548 PRM2P04554 102 aa12.88□□□□□ -0.35
VAC14-210ENST00000568548 NEXN-AS1Q8NBZ9 246 aa12.88□□□□□ -0.35
VAC14-210ENST00000568548 U3KQE9 123 aa12.88□□□□□ -0.35
VAC14-210ENST00000568548 NAV2Q8IVL1 2488 aa12.88□□□□□ -0.35
VAC14-210ENST00000568548 J3QR89 54 aa12.88□□□□□ -0.35
VAC14-210ENST00000568548 TEX15Q9BXT5 2789 aa12.88□□□□□ -0.35
VAC14-210ENST00000568548 RNF223E7ERA6 249 aa12.87□□□□□ -0.35
VAC14-210ENST00000568548 TOMM6Q96B49 74 aa12.87□□□□□ -0.35
VAC14-210ENST00000568548 CD7P09564 240 aa12.87□□□□□ -0.35
VAC14-210ENST00000568548 MRAP2Q96G30 205 aa12.87□□□□□ -0.35
VAC14-210ENST00000568548 NDUFS8O00217 210 aa12.86□□□□□ -0.35
VAC14-210ENST00000568548 ZNF688P0C7X2 276 aa12.86□□□□□ -0.35
VAC14-210ENST00000568548 NRGNQ92686 78 aa12.86□□□□□ -0.35
VAC14-210ENST00000568548 MOB4Q9Y3A3 225 aa12.86□□□□□ -0.35
VAC14-210ENST00000568548 CHD6Q8TD26 2715 aa12.86□□□□□ -0.35
VAC14-210ENST00000568548 C9orf139Q6ZV77 190 aa12.86□□□□□ -0.35
VAC14-210ENST00000568548 CCL19Q99731 98 aa12.86□□□□□ -0.35
VAC14-210ENST00000568548 KLK9Q9UKQ9 250 aa12.86□□□□□ -0.35
VAC14-210ENST00000568548 PRB1P04280 392 aa12.85□□□□□ -0.35
VAC14-210ENST00000568548 SCGB1C2P0DMR2 95 aa12.85□□□□□ -0.35
VAC14-210ENST00000568548 MAPK1IP1LQ8NDC0 245 aa12.85□□□□□ -0.35
VAC14-210ENST00000568548 RAX2Q96IS3 184 aa12.85□□□□□ -0.35
VAC14-210ENST00000568548 TSHBP01222 138 aa12.85□□□□□ -0.35
VAC14-210ENST00000568548 SYT8Q8NBV8 401 aa12.85□□□□□ -0.35
VAC14-210ENST00000568548 IGHV3-73A0A0B4J1V6 119 aa12.85□□□□□ -0.35
VAC14-210ENST00000568548 CRYGDP07320 174 aa12.85□□□□□ -0.35
VAC14-210ENST00000568548 ANKRD17O75179 2603 aaKnown RBP12.84□□□□□ -0.35
VAC14-210ENST00000568548 MDFICQ9P1T7 246 aa12.84□□□□□ -0.35
VAC14-210ENST00000568548 TSPEAR-AS2P59090 65 aa12.83□□□□□ -0.36
VAC14-210ENST00000568548 IGHV4-4A0A075B6R2 117 aa12.82□□□□□ -0.36
VAC14-210ENST00000568548 TSPAN13O95857 204 aa12.82□□□□□ -0.36
VAC14-210ENST00000568548 FAM159AQ6UWV7 190 aa12.82□□□□□ -0.36
VAC14-210ENST00000568548 ZNF462Q96JM2 2506 aa12.82□□□□□ -0.36
VAC14-210ENST00000568548 IGHV1-69DA0A0B4J2H0 117 aa12.82□□□□□ -0.36
VAC14-210ENST00000568548 ADARB2-AS1A8MUL3 147 aa12.82□□□□□ -0.36
VAC14-210ENST00000568548 IGHV1-69P01742 117 aa12.82□□□□□ -0.36
VAC14-210ENST00000568548 SUMO4Q6EEV6 95 aa12.82□□□□□ -0.36
VAC14-210ENST00000568548 SOCS3O14543 225 aa12.82□□□□□ -0.36
VAC14-210ENST00000568548 SMCPP49901 116 aaPredicted RBP12.82□□□□□ -0.36
VAC14-210ENST00000568548 ZNF56Q15929 161 aa12.82□□□□□ -0.36
VAC14-210ENST00000568548 NFE4Q86UQ8 179 aa12.82□□□□□ -0.36
VAC14-210ENST00000568548 BEX4Q9NWD9 120 aaPredicted RBP12.82□□□□□ -0.36
VAC14-210ENST00000568548 PRO0461Q9UI25 63 aa12.82□□□□□ -0.36
VAC14-210ENST00000568548 ZNF580Q9UK33 172 aa12.82□□□□□ -0.36
VAC14-210ENST00000568548 TRAV12-1A0A0B4J245 112 aa12.81□□□□□ -0.36
VAC14-210ENST00000568548 TAL2Q16559 108 aa12.81□□□□□ -0.36
VAC14-210ENST00000568548 PSMG4Q5JS54 123 aa12.81□□□□□ -0.36
VAC14-210ENST00000568548 PIMREGQ9BSJ6 248 aa12.81□□□□□ -0.36
VAC14-210ENST00000568548 RNASE13Q5GAN3 156 aaKnown RBP12.81□□□□□ -0.36
VAC14-210ENST00000568548 AVPP01185 164 aa12.8□□□□□ -0.36
VAC14-210ENST00000568548 ATP5J2P56134 94 aa12.8□□□□□ -0.36
VAC14-210ENST00000568548 SDHAF1A6NFY7 115 aa12.8□□□□□ -0.36
VAC14-210ENST00000568548 DLX4Q92988 240 aaPredicted RBP12.8□□□□□ -0.36
VAC14-210ENST00000568548 BBC3Q96PG8 261 aaPredicted RBP12.8□□□□□ -0.36
VAC14-210ENST00000568548 OVOL1O14753 267 aa12.79□□□□□ -0.36
VAC14-210ENST00000568548 SPINK13Q1W4C9 94 aa12.79□□□□□ -0.36
VAC14-210ENST00000568548 MRPL53Q96EL3 112 aaKnown RBP12.79□□□□□ -0.36
VAC14-210ENST00000568548 KIR2DL4Q99706 377 aa12.79□□□□□ -0.36
VAC14-210ENST00000568548 LINC00315P59091 139 aa12.79□□□□□ -0.36
VAC14-210ENST00000568548 ZNRF2Q8NHG8 242 aa12.79□□□□□ -0.36
VAC14-210ENST00000568548 AKAP9Q99996 3911 aa12.79□□□□□ -0.36
VAC14-210ENST00000568548 TRAV2A0A0B4J234 112 aa12.78□□□□□ -0.36
VAC14-210ENST00000568548 FAM223BA6NKX1 122 aa12.78□□□□□ -0.36
VAC14-210ENST00000568548 NDUFA4O00483 81 aa12.78□□□□□ -0.36
VAC14-210ENST00000568548 FAM223AQ8IWN6 122 aa12.78□□□□□ -0.36
VAC14-210ENST00000568548 C10orf105Q8TEF2 133 aa12.78□□□□□ -0.36
VAC14-210ENST00000568548 IGLV4-69A0A075B6H9 119 aa12.78□□□□□ -0.36
VAC14-210ENST00000568548 PRSS47A8MTI9 375 aa12.78□□□□□ -0.36
VAC14-210ENST00000568548 NPC2P61916 151 aa12.78□□□□□ -0.36
VAC14-210ENST00000568548 PRRC2AP48634 2157 aaKnown RBP12.78□□□□□ -0.36
VAC14-210ENST00000568548 IGHV4-30-2A0A087WSY4 118 aa12.78□□□□□ -0.36
VAC14-210ENST00000568548 P0DMU3 169 aa12.78□□□□□ -0.36
VAC14-210ENST00000568548 FAM231AP0DMU4 169 aa12.78□□□□□ -0.36
VAC14-210ENST00000568548 FAM231CP0DMU5 169 aa12.78□□□□□ -0.36
VAC14-210ENST00000568548 FOXI1Q12951 378 aa12.78□□□□□ -0.36
VAC14-210ENST00000568548 TMEM238LA0A1B0GVL6 79 aa12.77□□□□□ -0.36
VAC14-210ENST00000568548 A6NJY4 79 aa12.77□□□□□ -0.36
VAC14-210ENST00000568548 TCL1BO95988 128 aa12.77□□□□□ -0.36
VAC14-210ENST00000568548 MT-ATP8P03928 68 aa12.77□□□□□ -0.36
VAC14-210ENST00000568548 CKS1BP61024 79 aa12.77□□□□□ -0.36
VAC14-210ENST00000568548 CEMP1Q6PRD7 247 aaPredicted RBP12.77□□□□□ -0.36
VAC14-210ENST00000568548 Q9UF83 564 aa12.77□□□□□ -0.37
VAC14-210ENST00000568548 A0A0J9YY99 117 aa12.76□□□□□ -0.37
VAC14-210ENST00000568548 KNCNA6PVL3 124 aa12.76□□□□□ -0.37
VAC14-210ENST00000568548 PROK1P58294 105 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms