RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 SPAG8Q99932 426 aaPredicted RBP4.19□□□□□ -1.74
SF3B3-210ENST00000567654 SIGLEC8Q9NYZ4 499 aa4.19□□□□□ -1.74
SF3B3-210ENST00000567654 TIMM8BQ9Y5J9 83 aaPredicted RBP4.19□□□□□ -1.74
SF3B3-210ENST00000567654 HLA-DRB4X5D2U9 266 aa4.19□□□□□ -1.74
SF3B3-210ENST00000567654 JMJD1CQ15652 2540 aa4.19□□□□□ -1.74
SF3B3-210ENST00000567654 TRAV25A0A0B4J276 109 aa4.18□□□□□ -1.74
SF3B3-210ENST00000567654 D6R8Y8 96 aa4.18□□□□□ -1.74
SF3B3-210ENST00000567654 DUSP14O95147 198 aaKnown RBP4.18□□□□□ -1.74
SF3B3-210ENST00000567654 CD7P09564 240 aa4.18□□□□□ -1.74
SF3B3-210ENST00000567654 OR5AL1P0C617 328 aa4.18□□□□□ -1.74
SF3B3-210ENST00000567654 GATA1P15976 413 aaPredicted RBP4.18□□□□□ -1.74
SF3B3-210ENST00000567654 RAB4AP20338 218 aa4.18□□□□□ -1.74
SF3B3-210ENST00000567654 LEPP41159 167 aa4.18□□□□□ -1.74
SF3B3-210ENST00000567654 CDKN1BP46527 198 aa4.18□□□□□ -1.74
SF3B3-210ENST00000567654 DNLZQ5SXM8 178 aa4.18□□□□□ -1.74
SF3B3-210ENST00000567654 FAM104BQ5XKR9 115 aa4.18□□□□□ -1.74
SF3B3-210ENST00000567654 BAGE3Q86Y29 109 aa4.18□□□□□ -1.74
SF3B3-210ENST00000567654 PRSS3P2Q8NHM4 247 aa4.18□□□□□ -1.74
SF3B3-210ENST00000567654 PACRGQ96M98 296 aaPredicted RBP4.18□□□□□ -1.74
SF3B3-210ENST00000567654 CITED1Q99966 193 aa4.18□□□□□ -1.74
SF3B3-210ENST00000567654 SCRT2Q9NQ03 307 aa4.18□□□□□ -1.74
SF3B3-210ENST00000567654 U3KQK5 164 aa4.18□□□□□ -1.74
SF3B3-210ENST00000567654 IGHV4-4A0A075B6R2 117 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 IGHV3-16A0A0C4DH30 117 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 A0A1B0GW15 77 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 OR4C46A6NHA9 309 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 NPYP01303 97 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 PMCHP20382 165 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 EVI2AP22794 236 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 S100A2P29034 98 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 PMCHL1Q16048 86 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 KRTAP24-1Q3LI83 254 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 TRPT1Q86TN4 253 aaKnown RBP4.17□□□□□ -1.74
SF3B3-210ENST00000567654 NIT1Q86X76 327 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 FAM19A2Q8N3H0 131 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 RPL36ALQ969Q0 106 aaKnown RBP4.17□□□□□ -1.74
SF3B3-210ENST00000567654 BORCS7Q96B45 105 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 KCNS1Q96KK3 526 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 C12orf57Q99622 126 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 TMEM191AQ9H0A3 160 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 JPT2Q9H910 190 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 MDFICQ9P1T7 246 aa4.17□□□□□ -1.74
SF3B3-210ENST00000567654 FBN1P35555 2871 aaKnown RBP4.16□□□□□ -1.74
SF3B3-210ENST00000567654 ATRQ13535 2644 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 IGHV1OR15-1A0A075B7D0 117 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 TRAV26-2A0A0B4J265 109 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 M0R381 172 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 NXPH4O95158 308 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 S100A8P05109 93 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 GIG44P09565 113 aaPredicted RBP4.16□□□□□ -1.74
SF3B3-210ENST00000567654 SMIM6P0DI80 62 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 ASIPP42127 132 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 LINC00315P59091 139 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 CACNG7P62955 275 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 TDRG1Q3Y452 100 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 DGAT2L7PQ6IED9 249 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 RNASEKQ6P5S7 137 aaKnown RBP4.16□□□□□ -1.74
SF3B3-210ENST00000567654 FAM159AQ6UWV7 190 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 LINC00173Q6ZV60 143 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 SPATA12Q7Z6I5 190 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 Q8N976 141 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 TMEM18Q96B42 140 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 C9orf85Q96MD7 179 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 KIF25-AS1Q9Y6Z4 181 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 NOTCH3Q9UM47 2321 aa4.16□□□□□ -1.74
SF3B3-210ENST00000567654 A0A096LNJ9 63 aa4.15□□□□□ -1.75
SF3B3-210ENST00000567654 IGHV1-24A0A0C4DH33 117 aa4.15□□□□□ -1.75
SF3B3-210ENST00000567654 LOC389332A0A1B0GUA5 103 aa4.15□□□□□ -1.75
SF3B3-210ENST00000567654 OR11H12B2RN74 326 aa4.15□□□□□ -1.75
SF3B3-210ENST00000567654 S100A4P26447 101 aaKnown RBP4.15□□□□□ -1.75
SF3B3-210ENST00000567654 TSPOP30536 169 aa4.15□□□□□ -1.75
SF3B3-210ENST00000567654 IFI27P40305 119 aaPredicted RBP4.15□□□□□ -1.75
SF3B3-210ENST00000567654 AMTP48728 403 aa4.15□□□□□ -1.75
SF3B3-210ENST00000567654 C10orf25Q5T742 122 aa4.15□□□□□ -1.75
SF3B3-210ENST00000567654 SPANXN1Q5VSR9 72 aa4.15□□□□□ -1.75
SF3B3-210ENST00000567654 C1orf158Q8N1D5 194 aa4.15□□□□□ -1.75
SF3B3-210ENST00000567654 C14orf178Q8N769 122 aaPredicted RBP4.15□□□□□ -1.75
SF3B3-210ENST00000567654 NRACQ8N912 160 aa4.15□□□□□ -1.75
SF3B3-210ENST00000567654 PRELID3AQ96N28 172 aa4.15□□□□□ -1.75
SF3B3-210ENST00000567654 SAMD10Q9BYL1 202 aa4.15□□□□□ -1.75
SF3B3-210ENST00000567654 HUWE1Q7Z6Z7 4374 aaKnown RBP4.14□□□□□ -1.75
SF3B3-210ENST00000567654 IGLV2-18A0A075B6J9 118 aa4.14□□□□□ -1.75
SF3B3-210ENST00000567654 RPL35AP18077 110 aaKnown RBP4.14□□□□□ -1.75
SF3B3-210ENST00000567654 AZU1P20160 251 aa4.14□□□□□ -1.75
SF3B3-210ENST00000567654 CKS2P33552 79 aa4.14□□□□□ -1.75
SF3B3-210ENST00000567654 JOSD1Q15040 202 aaPredicted RBP4.14□□□□□ -1.75
SF3B3-210ENST00000567654 STHQ8IWL8 128 aa4.14□□□□□ -1.75
SF3B3-210ENST00000567654 ORMDL3Q8N138 153 aa4.14□□□□□ -1.75
SF3B3-210ENST00000567654 DEFB125Q8N687 156 aa4.14□□□□□ -1.75
SF3B3-210ENST00000567654 C11orf72Q8NBR9 251 aa4.14□□□□□ -1.75
SF3B3-210ENST00000567654 OR2K2Q8NGT1 345 aa4.14□□□□□ -1.75
SF3B3-210ENST00000567654 RPL39LQ96EH5 51 aaKnown RBP4.14□□□□□ -1.75
SF3B3-210ENST00000567654 XCL2Q9UBD3 114 aa4.14□□□□□ -1.75
SF3B3-210ENST00000567654 PHLDA3Q9Y5J5 127 aa4.14□□□□□ -1.75
SF3B3-210ENST00000567654 CBY3A6NI87 242 aa4.13□□□□□ -1.75
SF3B3-210ENST00000567654 HSBP1O75506 76 aa4.13□□□□□ -1.75
SF3B3-210ENST00000567654 INSP01308 110 aa4.13□□□□□ -1.75
SF3B3-210ENST00000567654 MGPP08493 103 aa4.13□□□□□ -1.75
SF3B3-210ENST00000567654 LINC00614P0C842 121 aa4.13□□□□□ -1.75
SF3B3-210ENST00000567654 C3orf79P0CE67 100 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms