RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 C11orf44Q8N8P7 122 aa13.88□□□□□ -0.19
MSLN-207ENST00000566549 NF1P21359 2839 aa13.87□□□□□ -0.19
MSLN-207ENST00000566549 DEFB131AP59861 70 aa13.87□□□□□ -0.19
MSLN-207ENST00000566549 Q8N2B8 174 aa13.87□□□□□ -0.19
MSLN-207ENST00000566549 ODF3Q96PU9 254 aa13.87□□□□□ -0.19
MSLN-207ENST00000566549 IGHV1OR15-1A0A075B7D0 117 aa13.86□□□□□ -0.19
MSLN-207ENST00000566549 C2orf66Q6UXQ4 117 aa13.86□□□□□ -0.19
MSLN-207ENST00000566549 A6NJY4 79 aa13.86□□□□□ -0.19
MSLN-207ENST00000566549 CCL25O15444 150 aa13.86□□□□□ -0.19
MSLN-207ENST00000566549 FOXI2Q6ZQN5 318 aa13.86□□□□□ -0.19
MSLN-207ENST00000566549 KLHL30-AS1Q8NEE0 82 aa13.86□□□□□ -0.19
MSLN-207ENST00000566549 TOMM6Q96B49 74 aa13.86□□□□□ -0.19
MSLN-207ENST00000566549 A0A087WX48 190 aa13.85□□□□□ -0.19
MSLN-207ENST00000566549 PTTG1IPP53801 180 aa13.85□□□□□ -0.19
MSLN-207ENST00000566549 DUSP14O95147 198 aaKnown RBP13.85□□□□□ -0.19
MSLN-207ENST00000566549 VAMP3Q15836 100 aa13.85□□□□□ -0.19
MSLN-207ENST00000566549 AMTNQ6UX39 209 aa13.85□□□□□ -0.19
MSLN-207ENST00000566549 DLX4Q92988 240 aaPredicted RBP13.85□□□□□ -0.19
MSLN-207ENST00000566549 C9orf85Q96MD7 179 aa13.85□□□□□ -0.19
MSLN-207ENST00000566549 TMEM61Q8N0U2 210 aa13.84□□□□□ -0.19
MSLN-207ENST00000566549 OR9G4Q8NGQ1 327 aa13.84□□□□□ -0.19
MSLN-207ENST00000566549 POM121L12Q8N7R1 296 aa13.84□□□□□ -0.19
MSLN-207ENST00000566549 PRM2P04554 102 aa13.83□□□□□ -0.19
MSLN-207ENST00000566549 RBMY1A1P0DJD3 496 aaKnown RBP13.83□□□□□ -0.19
MSLN-207ENST00000566549 RBMY1CP0DJD4 496 aa13.83□□□□□ -0.19
MSLN-207ENST00000566549 RBMY1FQ15415 496 aaKnown RBP13.83□□□□□ -0.19
MSLN-207ENST00000566549 ZNF56Q15929 161 aa13.83□□□□□ -0.19
MSLN-207ENST00000566549 Q6ZSV7 163 aa13.83□□□□□ -0.19
MSLN-207ENST00000566549 C4orf3Q8WVX3 66 aa13.83□□□□□ -0.2
MSLN-207ENST00000566549 SETD2Q9BYW2 2564 aaPredicted RBP13.82□□□□□ -0.2
MSLN-207ENST00000566549 A0A1W2PRX2 142 aa13.82□□□□□ -0.2
MSLN-207ENST00000566549 DNAJC9-AS1A6NH13 148 aa13.82□□□□□ -0.2
MSLN-207ENST00000566549 PPP1R17O96001 155 aa13.82□□□□□ -0.2
MSLN-207ENST00000566549 TRAV8-6A0A0B4J262 113 aa13.82□□□□□ -0.2
MSLN-207ENST00000566549 UBE2V1Q13404 147 aa13.81□□□□□ -0.2
MSLN-207ENST00000566549 ZNF876PQ49A33 203 aa13.81□□□□□ -0.2
MSLN-207ENST00000566549 SYT8Q8NBV8 401 aa13.81□□□□□ -0.2
MSLN-207ENST00000566549 DYNLRB2Q8TF09 96 aa13.81□□□□□ -0.2
MSLN-207ENST00000566549 PEMTQ9UBM1 199 aa13.81□□□□□ -0.2
MSLN-207ENST00000566549 CHTOPQ9Y3Y2 248 aaKnown RBP13.81□□□□□ -0.2
MSLN-207ENST00000566549 H7C1H1 209 aa13.81□□□□□ -0.2
MSLN-207ENST00000566549 HSD52Q0P140 79 aa13.81□□□□□ -0.2
MSLN-207ENST00000566549 BAALCQ8WXS3 180 aa13.81□□□□□ -0.2
MSLN-207ENST00000566549 ZNF256Q9Y2P7 627 aaPredicted RBP13.81□□□□□ -0.2
MSLN-207ENST00000566549 ACANP16112 2415 aa13.81□□□□□ -0.2
MSLN-207ENST00000566549 SDHAF1A6NFY7 115 aa13.8□□□□□ -0.2
MSLN-207ENST00000566549 F8VRH5 84 aa13.8□□□□□ -0.2
MSLN-207ENST00000566549 NEXN-AS1Q8NBZ9 246 aa13.8□□□□□ -0.2
MSLN-207ENST00000566549 TP53TG1Q9Y2A0 90 aa13.8□□□□□ -0.2
MSLN-207ENST00000566549 RBMY1BA6NDE4 496 aaKnown RBP13.8□□□□□ -0.2
MSLN-207ENST00000566549 RBMY1EA6NEQ0 496 aaKnown RBP13.8□□□□□ -0.2
MSLN-207ENST00000566549 SIVA1O15304 175 aa13.8□□□□□ -0.2
MSLN-207ENST00000566549 RBMY1DP0C7P1 496 aaKnown RBP13.8□□□□□ -0.2
MSLN-207ENST00000566549 PLNP26678 52 aa13.8□□□□□ -0.2
MSLN-207ENST00000566549 RPL39P62891 51 aaKnown RBP13.8□□□□□ -0.2
MSLN-207ENST00000566549 ESM1Q9NQ30 184 aa13.8□□□□□ -0.2
MSLN-207ENST00000566549 K7EMI3 77 aa13.79□□□□□ -0.2
MSLN-207ENST00000566549 CRYGDP07320 174 aa13.79□□□□□ -0.2
MSLN-207ENST00000566549 TRAV12-1A0A0B4J245 112 aa13.79□□□□□ -0.2
MSLN-207ENST00000566549 POLR2KP53803 58 aaKnown RBP13.79□□□□□ -0.2
MSLN-207ENST00000566549 SEC11AP67812 179 aa13.79□□□□□ -0.2
MSLN-207ENST00000566549 NAA38Q9BRA0 125 aaKnown RBP13.79□□□□□ -0.2
MSLN-207ENST00000566549 IGHV3-73A0A0B4J1V6 119 aa13.78□□□□□ -0.2
MSLN-207ENST00000566549 H3BMM0 161 aa13.78□□□□□ -0.2
MSLN-207ENST00000566549 K7EP13 123 aa13.78□□□□□ -0.2
MSLN-207ENST00000566549 HLA-DRB4P13762 266 aa13.78□□□□□ -0.2
MSLN-207ENST00000566549 AMMECR1LQ6DCA0 310 aa13.78□□□□□ -0.2
MSLN-207ENST00000566549 ZFP2Q6ZN57 461 aa13.78□□□□□ -0.2
MSLN-207ENST00000566549 MAPKAPK5-AS1Q8N8E1 139 aa13.78□□□□□ -0.2
MSLN-207ENST00000566549 KIR2DL4Q99706 377 aa13.78□□□□□ -0.2
MSLN-207ENST00000566549 HLA-DRB4X5D2U9 266 aa13.78□□□□□ -0.2
MSLN-207ENST00000566549 TRBV25-1A0A075B6N4 114 aa13.78□□□□□ -0.2
MSLN-207ENST00000566549 PRSS29PA6NIE9 313 aa13.78□□□□□ -0.2
MSLN-207ENST00000566549 CYSLTR1Q9Y271 337 aa13.78□□□□□ -0.2
MSLN-207ENST00000566549 EMP1P54849 157 aa13.77□□□□□ -0.21
MSLN-207ENST00000566549 CD300EQ496F6 205 aaPredicted RBP13.77□□□□□ -0.21
MSLN-207ENST00000566549 MORN3Q6PF18 240 aaPredicted RBP13.77□□□□□ -0.21
MSLN-207ENST00000566549 RAB37Q96AX2 223 aa13.77□□□□□ -0.21
MSLN-207ENST00000566549 CHAC1Q9BUX1 264 aa13.77□□□□□ -0.21
MSLN-207ENST00000566549 VCYO14598 125 aa13.76□□□□□ -0.21
MSLN-207ENST00000566549 GCSHP23434 173 aa13.76□□□□□ -0.21
MSLN-207ENST00000566549 ITPR2Q14571 2701 aa13.76□□□□□ -0.21
MSLN-207ENST00000566549 MTORP42345 2549 aa13.76□□□□□ -0.21
MSLN-207ENST00000566549 WNK1Q9H4A3 2382 aa13.76□□□□□ -0.21
MSLN-207ENST00000566549 TRGV11A0A075B6L2 103 aa13.76□□□□□ -0.21
MSLN-207ENST00000566549 M0QY20 66 aa13.76□□□□□ -0.21
MSLN-207ENST00000566549 MAP6D1Q9H9H5 199 aa13.76□□□□□ -0.21
MSLN-207ENST00000566549 A6NDN8 102 aa13.75□□□□□ -0.21
MSLN-207ENST00000566549 PDZD2O15018 2839 aa13.75□□□□□ -0.21
MSLN-207ENST00000566549 TSHBP01222 138 aa13.75□□□□□ -0.21
MSLN-207ENST00000566549 DEFB114Q30KQ6 69 aa13.75□□□□□ -0.21
MSLN-207ENST00000566549 TMEM86BQ8N661 226 aa13.75□□□□□ -0.21
MSLN-207ENST00000566549 OR4C5Q8NGB2 326 aa13.75□□□□□ -0.21
MSLN-207ENST00000566549 RAX2Q96IS3 184 aa13.75□□□□□ -0.21
MSLN-207ENST00000566549 HELZ2Q9BYK8 2649 aaKnown RBP13.74□□□□□ -0.21
MSLN-207ENST00000566549 NIPBLQ6KC79 2804 aaeCLIP13.74□□□□□ -0.21
MSLN-207ENST00000566549 CD28P10747 220 aa13.74□□□□□ -0.21
MSLN-207ENST00000566549 FXYD2P54710 66 aa13.73□□□□□ -0.21
MSLN-207ENST00000566549 YAE1D1Q9NRH1 226 aa13.73□□□□□ -0.21
MSLN-207ENST00000566549 RPL32P62910 135 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms