RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 SYT8Q8NBV8 401 aa12.32□□□□□ -0.44
RAB40C-210ENST00000566290 C20orf78Q9BR46 151 aa12.32□□□□□ -0.44
RAB40C-210ENST00000566290 KIF25-AS1Q9Y6Z4 181 aa12.32□□□□□ -0.44
RAB40C-210ENST00000566290 DYNC2H1Q8NCM8 4307 aaKnown RBP12.32□□□□□ -0.44
RAB40C-210ENST00000566290 KIR2DL5BA0A0G2JN68 375 aa12.31□□□□□ -0.44
RAB40C-210ENST00000566290 KIR2DL5BA0A0G2JPC4 375 aa12.31□□□□□ -0.44
RAB40C-210ENST00000566290 RBMY1BA6NDE4 496 aaKnown RBP12.31□□□□□ -0.44
RAB40C-210ENST00000566290 RBMY1EA6NEQ0 496 aaKnown RBP12.31□□□□□ -0.44
RAB40C-210ENST00000566290 KNCNA6PVL3 124 aa12.31□□□□□ -0.44
RAB40C-210ENST00000566290 OR11H12B2RN74 326 aa12.31□□□□□ -0.44
RAB40C-210ENST00000566290 GNRH2O43555 120 aa12.31□□□□□ -0.44
RAB40C-210ENST00000566290 LEPROTL1O95214 131 aa12.31□□□□□ -0.44
RAB40C-210ENST00000566290 SCGB1D1O95968 90 aa12.31□□□□□ -0.44
RAB40C-210ENST00000566290 PF4P02776 101 aa12.31□□□□□ -0.44
RAB40C-210ENST00000566290 CD7P09564 240 aa12.31□□□□□ -0.44
RAB40C-210ENST00000566290 RBMY1DP0C7P1 496 aaKnown RBP12.31□□□□□ -0.44
RAB40C-210ENST00000566290 BTF3P20290 206 aaKnown RBP12.31□□□□□ -0.44
RAB40C-210ENST00000566290 INSL3P51460 131 aa12.31□□□□□ -0.44
RAB40C-210ENST00000566290 PMCHL1Q16048 86 aa12.31□□□□□ -0.44
RAB40C-210ENST00000566290 TRPT1Q86TN4 253 aaKnown RBP12.31□□□□□ -0.44
RAB40C-210ENST00000566290 KIR2DL5AQ8N109 375 aa12.31□□□□□ -0.44
RAB40C-210ENST00000566290 LINC00482Q8N8I6 264 aa12.31□□□□□ -0.44
RAB40C-210ENST00000566290 TSTD3H0UI37 97 aa12.3□□□□□ -0.44
RAB40C-210ENST00000566290 Q8N1Y9 231 aa12.3□□□□□ -0.44
RAB40C-210ENST00000566290 Q8N8P6 123 aa12.3□□□□□ -0.44
RAB40C-210ENST00000566290 TMEM70Q9BUB7 260 aa12.3□□□□□ -0.44
RAB40C-210ENST00000566290 EDA2RQ9HAV5 297 aa12.3□□□□□ -0.44
RAB40C-210ENST00000566290 IGLV2-18A0A075B6J9 118 aa12.29□□□□□ -0.44
RAB40C-210ENST00000566290 INSP01308 110 aa12.29□□□□□ -0.44
RAB40C-210ENST00000566290 IFI27P40305 119 aaPredicted RBP12.29□□□□□ -0.44
RAB40C-210ENST00000566290 KRTDAPP60985 99 aa12.29□□□□□ -0.44
RAB40C-210ENST00000566290 PET117Q6UWS5 81 aa12.29□□□□□ -0.44
RAB40C-210ENST00000566290 TRAV12-2A0A075B6T6 113 aa12.28□□□□□ -0.44
RAB40C-210ENST00000566290 HBDP02042 147 aa12.28□□□□□ -0.44
RAB40C-210ENST00000566290 LINC00315P59091 139 aa12.28□□□□□ -0.44
RAB40C-210ENST00000566290 SACSQ9NZJ4 4579 aa12.27□□□□□ -0.44
RAB40C-210ENST00000566290 A0A096LNJ9 63 aa12.27□□□□□ -0.45
RAB40C-210ENST00000566290 C20orf202A1L168 122 aa12.27□□□□□ -0.45
RAB40C-210ENST00000566290 SAP30O75446 220 aa12.27□□□□□ -0.45
RAB40C-210ENST00000566290 NCR2O95944 276 aa12.27□□□□□ -0.45
RAB40C-210ENST00000566290 NUTF2P61970 127 aaKnown RBP12.27□□□□□ -0.45
RAB40C-210ENST00000566290 WWC2-AS2Q96NR7 200 aa12.27□□□□□ -0.45
RAB40C-210ENST00000566290 SMKR1H3BMG3 65 aa12.26□□□□□ -0.45
RAB40C-210ENST00000566290 SYS1-DBNDD2H3BUS1 97 aa12.26□□□□□ -0.45
RAB40C-210ENST00000566290 IGKV3-20P01619 116 aa12.26□□□□□ -0.45
RAB40C-210ENST00000566290 RBMY1A1P0DJD3 496 aaKnown RBP12.26□□□□□ -0.45
RAB40C-210ENST00000566290 RBMY1CP0DJD4 496 aa12.26□□□□□ -0.45
RAB40C-210ENST00000566290 RBMY1FQ15415 496 aaKnown RBP12.26□□□□□ -0.45
RAB40C-210ENST00000566290 STHQ8IWL8 128 aa12.26□□□□□ -0.45
RAB40C-210ENST00000566290 SPXQ9BT56 116 aa12.26□□□□□ -0.45
RAB40C-210ENST00000566290 TRBV6-5A0A0K0K1A5 114 aa12.25□□□□□ -0.45
RAB40C-210ENST00000566290 LINC01549A6NIU2 74 aa12.25□□□□□ -0.45
RAB40C-210ENST00000566290 SMIM17P0DL12 118 aa12.25□□□□□ -0.45
RAB40C-210ENST00000566290 ZNF415Q09FC8 603 aa12.25□□□□□ -0.45
RAB40C-210ENST00000566290 ZNF664Q8N3J9 261 aa12.25□□□□□ -0.45
RAB40C-210ENST00000566290 SMIM2Q9BVW6 85 aa12.25□□□□□ -0.45
RAB40C-210ENST00000566290 MAP1LC3CQ9BXW4 147 aa12.25□□□□□ -0.45
RAB40C-210ENST00000566290 C19orf73Q9NVV2 129 aa12.25□□□□□ -0.45
RAB40C-210ENST00000566290 FCER1GP30273 86 aa12.24□□□□□ -0.45
RAB40C-210ENST00000566290 KRTAP10-11P60412 298 aa12.24□□□□□ -0.45
RAB40C-210ENST00000566290 SSTP61278 116 aa12.24□□□□□ -0.45
RAB40C-210ENST00000566290 C14orf178Q8N769 122 aaPredicted RBP12.24□□□□□ -0.45
RAB40C-210ENST00000566290 RASL10AQ92737 203 aa12.24□□□□□ -0.45
RAB40C-210ENST00000566290 TENM2Q9NT68 2774 aa12.24□□□□□ -0.45
RAB40C-210ENST00000566290 PCP4L1A6NKN8 68 aa12.23□□□□□ -0.45
RAB40C-210ENST00000566290 SUMO2P61956 95 aaKnown RBP12.23□□□□□ -0.45
RAB40C-210ENST00000566290 LINC01545Q5VT33 79 aa12.23□□□□□ -0.45
RAB40C-210ENST00000566290 MORN3Q6PF18 240 aaPredicted RBP12.23□□□□□ -0.45
RAB40C-210ENST00000566290 VAMP8Q9BV40 100 aa12.23□□□□□ -0.45
RAB40C-210ENST00000566290 MDFICQ9P1T7 246 aa12.23□□□□□ -0.45
RAB40C-210ENST00000566290 CBY3A6NI87 242 aa12.22□□□□□ -0.45
RAB40C-210ENST00000566290 C1QTNF4Q9BXJ3 329 aa12.22□□□□□ -0.45
RAB40C-210ENST00000566290 TIMM8BQ9Y5J9 83 aaPredicted RBP12.22□□□□□ -0.45
RAB40C-210ENST00000566290 MUC4Q99102 2169 aa12.22□□□□□ -0.45
RAB40C-210ENST00000566290 LOC389332A0A1B0GUA5 103 aa12.21□□□□□ -0.45
RAB40C-210ENST00000566290 A8MWV9 139 aa12.21□□□□□ -0.45
RAB40C-210ENST00000566290 M0R2P5 195 aa12.21□□□□□ -0.45
RAB40C-210ENST00000566290 GAS8-AS1O95177 125 aa12.21□□□□□ -0.45
RAB40C-210ENST00000566290 CRYGDP07320 174 aa12.21□□□□□ -0.45
RAB40C-210ENST00000566290 ZNF124Q15973 351 aa12.21□□□□□ -0.45
RAB40C-210ENST00000566290 ORMDL2Q53FV1 153 aa12.21□□□□□ -0.45
RAB40C-210ENST00000566290 C9orf66Q5T8R8 295 aa12.21□□□□□ -0.45
RAB40C-210ENST00000566290 C11orf72Q8NBR9 251 aa12.21□□□□□ -0.45
RAB40C-210ENST00000566290 IL17DQ8TAD2 202 aa12.21□□□□□ -0.45
RAB40C-210ENST00000566290 TCAPO15273 167 aa12.2□□□□□ -0.46
RAB40C-210ENST00000566290 G0S2P27469 103 aa12.2□□□□□ -0.46
RAB40C-210ENST00000566290 DDTP30046 118 aa12.2□□□□□ -0.46
RAB40C-210ENST00000566290 LAGE3Q14657 143 aa12.2□□□□□ -0.46
RAB40C-210ENST00000566290 LGALS9BQ3B8N2 356 aa12.2□□□□□ -0.46
RAB40C-210ENST00000566290 LGALS9CQ6DKI2 356 aa12.2□□□□□ -0.46
RAB40C-210ENST00000566290 MCRIP2Q9BUT9 160 aaKnown RBP12.2□□□□□ -0.46
RAB40C-210ENST00000566290 K7EIL1 84 aa12.19□□□□□ -0.46
RAB40C-210ENST00000566290 RHODO00212 210 aa12.19□□□□□ -0.46
RAB40C-210ENST00000566290 GATA1P15976 413 aaPredicted RBP12.19□□□□□ -0.46
RAB40C-210ENST00000566290 ZNF876PQ49A33 203 aa12.19□□□□□ -0.46
RAB40C-210ENST00000566290 MRPL52Q86TS9 123 aaKnown RBP12.19□□□□□ -0.46
RAB40C-210ENST00000566290 TRAV9-2A0A087WT02 112 aa12.18□□□□□ -0.46
RAB40C-210ENST00000566290 TRAV26-2A0A0B4J265 109 aa12.18□□□□□ -0.46
RAB40C-210ENST00000566290 LINC00587B1AMM8 73 aa12.18□□□□□ -0.46
RAB40C-210ENST00000566290 H7C1H1 209 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms