RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 SYNJ2BPP57105 145 aa8.06□□□□□ -1.12
USB1-212ENST00000566082 SUMO4Q6EEV6 95 aa8.06□□□□□ -1.12
USB1-212ENST00000566082 COPS9Q8WXC6 57 aa8.06□□□□□ -1.12
USB1-212ENST00000566082 MRPL53Q96EL3 112 aaKnown RBP8.06□□□□□ -1.12
USB1-212ENST00000566082 NDUFA12Q9UI09 145 aa8.06□□□□□ -1.12
USB1-212ENST00000566082 HHLA3Q9XRX5 114 aa8.06□□□□□ -1.12
USB1-212ENST00000566082 LENEPQ9Y5L5 61 aa8.06□□□□□ -1.12
USB1-212ENST00000566082 ADAMTS20P59510 1910 aa8.06□□□□□ -1.12
USB1-212ENST00000566082 C9orf47Q6ZRZ4 202 aa8.06□□□□□ -1.12
USB1-212ENST00000566082 TRBV7-9A0A0J9YWB2 115 aa8.06□□□□□ -1.12
USB1-212ENST00000566082 MT-ATP8P03928 68 aa8.06□□□□□ -1.12
USB1-212ENST00000566082 ZNF48Q96MX3 618 aaPredicted RBP8.06□□□□□ -1.12
USB1-212ENST00000566082 C11orf21Q9P2W6 132 aa8.06□□□□□ -1.12
USB1-212ENST00000566082 ZFP36P26651 326 aaKnown RBP8.05□□□□□ -1.12
USB1-212ENST00000566082 NBEAQ8NFP9 2946 aa8.05□□□□□ -1.12
USB1-212ENST00000566082 TRAV13-1A0A0B4J241 112 aa8.05□□□□□ -1.12
USB1-212ENST00000566082 IGHV3-38A0A0C4DH36 116 aa8.05□□□□□ -1.12
USB1-212ENST00000566082 I3L3M4 83 aa8.05□□□□□ -1.12
USB1-212ENST00000566082 OPRPNQ99935 248 aaPredicted RBP8.05□□□□□ -1.12
USB1-212ENST00000566082 MSRB2Q9Y3D2 182 aa8.05□□□□□ -1.12
USB1-212ENST00000566082 CFAP47Q6ZTR5 3102 aa8.05□□□□□ -1.12
USB1-212ENST00000566082 NCOR2Q9Y618 2525 aa8.05□□□□□ -1.12
USB1-212ENST00000566082 PTPRBP23467 1997 aa8.05□□□□□ -1.12
USB1-212ENST00000566082 IGHV1-69DA0A0B4J2H0 117 aa8.05□□□□□ -1.12
USB1-212ENST00000566082 IGHV3-16A0A0C4DH30 117 aa8.05□□□□□ -1.12
USB1-212ENST00000566082 UNQ9165/PRO28630Q6UXU0 137 aa8.05□□□□□ -1.12
USB1-212ENST00000566082 Q6ZQT7 251 aa8.05□□□□□ -1.12
USB1-212ENST00000566082 MUSTN1Q8IVN3 82 aa8.05□□□□□ -1.12
USB1-212ENST00000566082 C15orf53Q8NAA6 179 aa8.05□□□□□ -1.12
USB1-212ENST00000566082 RASL10AQ92737 203 aa8.05□□□□□ -1.12
USB1-212ENST00000566082 ANKRD11Q6UB99 2663 aaPredicted RBP8.05□□□□□ -1.12
USB1-212ENST00000566082 C16orf54Q6UWD8 224 aa8.04□□□□□ -1.12
USB1-212ENST00000566082 IGHV1OR15-1A0A075B7D0 117 aa8.04□□□□□ -1.12
USB1-212ENST00000566082 TCL1BO95988 128 aa8.04□□□□□ -1.12
USB1-212ENST00000566082 IFITM1P13164 125 aa8.04□□□□□ -1.12
USB1-212ENST00000566082 CCDC140Q96MF4 163 aa8.04□□□□□ -1.12
USB1-212ENST00000566082 IGHV7-4-1A0A0J9YVY3 117 aa8.04□□□□□ -1.12
USB1-212ENST00000566082 NDUFA11Q86Y39 141 aa8.04□□□□□ -1.12
USB1-212ENST00000566082 TRBV12-3P01733 135 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 IGHV1-69P01742 117 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 IGHV3-53P01767 116 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 SRSF2Q01130 221 aaKnown RBP8.03□□□□□ -1.12
USB1-212ENST00000566082 DCHS1Q96JQ0 3298 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 LY6LH3BQJ8 138 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 GAGE5Q13069 117 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 GAGE6Q13070 117 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 PRIMA1Q86XR5 153 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 GAGE12JA6NER3 117 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 MRPS12O15235 138 aaKnown RBP8.03□□□□□ -1.12
USB1-212ENST00000566082 GAGE7O76087 117 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 GAGE12FP0CL80 117 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 GAGE12GP0CL81 117 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 GAGE12IP0CL82 117 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 DEFB131AP59861 70 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 GAGE4Q13068 117 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 Q6ZUT4 128 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 PIP4P2Q8N4L2 257 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 TMEM101Q96IK0 257 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 CARD19Q96LW7 228 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 SETD2Q9BYW2 2564 aaPredicted RBP8.03□□□□□ -1.12
USB1-212ENST00000566082 C11orf44Q8N8P7 122 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 NRACQ8N912 160 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 NEXN-AS1Q8NBZ9 246 aa8.03□□□□□ -1.12
USB1-212ENST00000566082 K7ENP7 123 aa8.02□□□□□ -1.13
USB1-212ENST00000566082 BLCAPP62952 87 aa8.02□□□□□ -1.13
USB1-212ENST00000566082 Q8NA96 180 aa8.02□□□□□ -1.13
USB1-212ENST00000566082 MORN3Q6PF18 240 aaPredicted RBP8.02□□□□□ -1.13
USB1-212ENST00000566082 RNF183Q96D59 192 aa8.02□□□□□ -1.13
USB1-212ENST00000566082 ZFAND3Q9H8U3 227 aa8.02□□□□□ -1.13
USB1-212ENST00000566082 MRGPRG-AS1Q2M3A8 158 aa8.01□□□□□ -1.13
USB1-212ENST00000566082 LINC01620Q4KN68 170 aa8.01□□□□□ -1.13
USB1-212ENST00000566082 TRGV2A0A075B6R0 118 aa8.01□□□□□ -1.13
USB1-212ENST00000566082 AJUBAQ96IF1 538 aa8.01□□□□□ -1.13
USB1-212ENST00000566082 CLUHP3Q96NS8 147 aa8.01□□□□□ -1.13
USB1-212ENST00000566082 USP9YO00507 2555 aaPredicted RBP8□□□□□ -1.13
USB1-212ENST00000566082 TRGV1A0A0A0MS02 117 aa8□□□□□ -1.13
USB1-212ENST00000566082 A0A1W2PRX2 142 aa8□□□□□ -1.13
USB1-212ENST00000566082 ZNF415Q09FC8 603 aa8□□□□□ -1.13
USB1-212ENST00000566082 C5orf56Q8N8D9 126 aa8□□□□□ -1.13
USB1-212ENST00000566082 UBE2E2Q96LR5 201 aa8□□□□□ -1.13
USB1-212ENST00000566082 TLN2Q9Y4G6 2542 aa8□□□□□ -1.13
USB1-212ENST00000566082 ODF3BA8MYP8 253 aa8□□□□□ -1.13
USB1-212ENST00000566082 LEPROTO15243 131 aa8□□□□□ -1.13
USB1-212ENST00000566082 A0A0J9YY99 117 aa8□□□□□ -1.13
USB1-212ENST00000566082 LINC00158P58513 81 aa8□□□□□ -1.13
USB1-212ENST00000566082 DAND5Q8N907 189 aa8□□□□□ -1.13
USB1-212ENST00000566082 C20orf173Q96LM9 149 aa8□□□□□ -1.13
USB1-212ENST00000566082 TRBV7-3A0A075B6L6 115 aa7.99□□□□□ -1.13
USB1-212ENST00000566082 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.99□□□□□ -1.13
USB1-212ENST00000566082 IGKV2-29A2NJV5 120 aaPredicted RBP7.99□□□□□ -1.13
USB1-212ENST00000566082 PRR9Q5T870 116 aa7.99□□□□□ -1.13
USB1-212ENST00000566082 GAGE2AQ6NT46 116 aa7.99□□□□□ -1.13
USB1-212ENST00000566082 ATP6V0E2Q8NHE4 81 aa7.99□□□□□ -1.13
USB1-212ENST00000566082 RAI1Q7Z5J4 1906 aaPredicted RBP7.99□□□□□ -1.13
USB1-212ENST00000566082 PRSS47A8MTI9 375 aa7.99□□□□□ -1.13
USB1-212ENST00000566082 TNFRSF13BO14836 293 aaPredicted RBP7.99□□□□□ -1.13
USB1-212ENST00000566082 MDFICQ9P1T7 246 aa7.99□□□□□ -1.13
USB1-212ENST00000566082 DMXL1Q9Y485 3027 aa7.99□□□□□ -1.13
USB1-212ENST00000566082 RHOHQ15669 191 aa7.99□□□□□ -1.13
USB1-212ENST00000566082 Q8N1Y9 231 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms