RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 CCL11P51671 97 aa2.28□□□□□ -2.05
CHD9-218ENST00000566029 ZCCHC24Q8N2G6 241 aaKnown RBP2.28□□□□□ -2.05
CHD9-218ENST00000566029 MRGPRG-AS1Q2M3A8 158 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 CASC2Q6XLA1 102 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 WDR86Q86TI4 376 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 Q8N8P6 123 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 ZNF706Q9Y5V0 76 aaPredicted RBP2.27□□□□□ -2.05
CHD9-218ENST00000566029 SPTBN2O15020 2390 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 SMIM26A0A096LP01 95 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 UBL5Q9BZL1 73 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 NAV3Q8IVL0 2385 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 IGHV3-15A0A0B4J1V0 119 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 A0A1B0GUT8 65 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 ZNF134P52741 427 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 LIMD2Q9BT23 127 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 LRP4O75096 1905 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 PSPHP1O15172 72 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 LINC00205P59089 165 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 DEFB121Q5J5C9 76 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 LYZL1Q6UWQ5 148 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 DEFB119Q8N690 84 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 PROK2Q9HC23 129 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 IGHV3OR16-9A0A0B4J2B5 98 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 NCOA6Q14686 2063 aaPredicted RBP2.27□□□□□ -2.05
CHD9-218ENST00000566029 CCL18P55774 89 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 C4orf48Q5BLP8 95 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 KAAG1Q9UBP8 84 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 RUSC1-AS1Q66K80 236 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 PRIMA1Q86XR5 153 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 SLC22A18ASQ8N1D0 253 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 CHCHD7Q9BUK0 85 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 MRPL35Q9NZE8 188 aaKnown RBP2.27□□□□□ -2.05
CHD9-218ENST00000566029 SMKR1H3BMG3 65 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 HLA-DMBP28068 263 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 RNASE13Q5GAN3 156 aaKnown RBP2.27□□□□□ -2.05
CHD9-218ENST00000566029 ABCA1O95477 2261 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 CNOT1A5YKK6 2376 aaKnown RBP2.27□□□□□ -2.05
CHD9-218ENST00000566029 SDK2Q58EX2 2172 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 INSP01308 110 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 POM121L12Q8N7R1 296 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 MRPL36Q9P0J6 103 aaKnown RBP2.27□□□□□ -2.05
CHD9-218ENST00000566029 HIST2H2BCQ6DN03 193 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 HIST2H2BDQ6DRA6 164 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 LY6G5BQ8NDX9 201 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 MDFIQ99750 246 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 HIGD2AQ9BW72 106 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 TP53TG1Q9Y2A0 90 aa2.27□□□□□ -2.05
CHD9-218ENST00000566029 TIMM17BO60830 172 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 LINC01620Q4KN68 170 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 RPL39P5Q59GN2 51 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 TMEM200BQ69YZ2 307 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 PRR15Q8IV56 129 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 LINC00526Q96FQ7 95 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 DPH3Q96FX2 82 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 ADAMTS20P59510 1910 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 HIGD1CA8MV81 97 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 H3BPC8 53 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 CECR9P0C854 216 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 C1orf158Q8N1D5 194 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 KLF14Q8TD94 323 aaPredicted RBP2.26□□□□□ -2.05
CHD9-218ENST00000566029 RNF182Q8N6D2 247 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 DAZ1Q9NQZ3 744 aaKnown RBP2.26□□□□□ -2.05
CHD9-218ENST00000566029 TRBV7-7A0A0K0K1E9 115 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 ELANEP08246 267 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 ZC2HC1BQ5TFG8 222 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 LINC01356Q8N9X3 169 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 PHLDA3Q9Y5J5 127 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 TRIOBPQ9H2D6 2365 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 PMAIP1Q13794 54 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 Q8N1Y9 231 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 TMEM14CQ9P0S9 112 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 SNURFQ9Y675 71 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 HAMPP81172 84 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 PRR25Q96S07 402 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 TMEM14BQ9NUH8 114 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 SEM1Q6ZVN7 128 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 TMEM61Q8N0U2 210 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 TMEM167AQ8TBQ9 72 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 JPT2Q9H910 190 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 Q9UF83 564 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 H0YGX0 51 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 NDUFA4L2Q9NRX3 87 aa2.26□□□□□ -2.05
CHD9-218ENST00000566029 RPL37AP8A6NKH3 93 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 NANOS2P60321 138 aaKnown RBP2.25□□□□□ -2.05
CHD9-218ENST00000566029 SDIM1Q6ZPB5 146 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 PLA2G2FQ9BZM2 168 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 MED12Q93074 2177 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 K7EM74 188 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 H3BS24 57 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 MRPS12O15235 138 aaKnown RBP2.25□□□□□ -2.05
CHD9-218ENST00000566029 MLANAQ16655 118 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 FANCD2OSQ96PS1 177 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 IGLV1-50A0A075B6I6 118 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 IGHV1OR15-1A0A075B7D0 117 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 ERC2-IT1O76042 136 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 GAS8-AS1O95177 125 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 IGHV1-8P0DP01 117 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 FBXL19-AS1Q494R0 122 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 DEFB108BQ8NET1 73 aa2.25□□□□□ -2.05
CHD9-218ENST00000566029 SAA2P0DJI9 122 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms