RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 CASC10Q5T4H9 136 aa10.87□□□□□ -0.67
CDH11-209ENST00000564317 FAM74A4Q5TZK3 123 aa10.87□□□□□ -0.67
CDH11-209ENST00000564317 Q6ZSN1 163 aa10.87□□□□□ -0.67
CDH11-209ENST00000564317 C14orf178Q8N769 122 aaPredicted RBP10.87□□□□□ -0.67
CDH11-209ENST00000564317 VSIG2Q96IQ7 327 aa10.87□□□□□ -0.67
CDH11-209ENST00000564317 AP1S3Q96PC3 154 aa10.87□□□□□ -0.67
CDH11-209ENST00000564317 KIF25-AS1Q9Y6Z4 181 aa10.87□□□□□ -0.67
CDH11-209ENST00000564317 DYNC2H1Q8NCM8 4307 aaKnown RBP10.87□□□□□ -0.67
CDH11-209ENST00000564317 STARD9Q9P2P6 4700 aa10.87□□□□□ -0.67
CDH11-209ENST00000564317 TRAV26-1A0A087WT03 109 aa10.86□□□□□ -0.67
CDH11-209ENST00000564317 A0A1B0GUT8 65 aa10.86□□□□□ -0.67
CDH11-209ENST00000564317 IGLL5B9A064 214 aa10.86□□□□□ -0.67
CDH11-209ENST00000564317 CRYBA4P53673 196 aa10.86□□□□□ -0.67
CDH11-209ENST00000564317 LINC00315P59091 139 aa10.86□□□□□ -0.67
CDH11-209ENST00000564317 RHEBQ15382 184 aa10.86□□□□□ -0.67
CDH11-209ENST00000564317 ZFP2Q6ZN57 461 aa10.86□□□□□ -0.67
CDH11-209ENST00000564317 SVBPQ8N300 66 aa10.86□□□□□ -0.67
CDH11-209ENST00000564317 CTDSP1Q9GZU7 261 aa10.86□□□□□ -0.67
CDH11-209ENST00000564317 CSMD3Q7Z407 3707 aa10.86□□□□□ -0.67
CDH11-209ENST00000564317 RHODO00212 210 aa10.85□□□□□ -0.67
CDH11-209ENST00000564317 EVI2AP22794 236 aa10.85□□□□□ -0.67
CDH11-209ENST00000564317 FAM3BP58499 235 aaPredicted RBP10.85□□□□□ -0.67
CDH11-209ENST00000564317 BORCS7Q96B45 105 aa10.85□□□□□ -0.67
CDH11-209ENST00000564317 RPS10P5Q9NQ39 176 aa10.85□□□□□ -0.67
CDH11-209ENST00000564317 HHLA3Q9XRX5 114 aa10.85□□□□□ -0.67
CDH11-209ENST00000564317 KLK5Q9Y337 293 aaPredicted RBP10.85□□□□□ -0.67
CDH11-209ENST00000564317 A0A087WWC5 75 aa10.84□□□□□ -0.67
CDH11-209ENST00000564317 CIDEAO60543 219 aa10.84□□□□□ -0.67
CDH11-209ENST00000564317 TRGC1P0CF51 173 aa10.84□□□□□ -0.67
CDH11-209ENST00000564317 FAM210BQ96KR6 192 aa10.84□□□□□ -0.67
CDH11-209ENST00000564317 PRO0255Q9UI72 69 aa10.84□□□□□ -0.67
CDH11-209ENST00000564317 LOC100131303A0A0U1RQF7 123 aa10.83□□□□□ -0.68
CDH11-209ENST00000564317 PAX4O43316 350 aa10.83□□□□□ -0.68
CDH11-209ENST00000564317 SNAPINO95295 136 aa10.83□□□□□ -0.68
CDH11-209ENST00000564317 RIGQ13278 110 aa10.83□□□□□ -0.68
CDH11-209ENST00000564317 MRPL54Q6P161 138 aaKnown RBP10.83□□□□□ -0.68
CDH11-209ENST00000564317 ATRAIDQ6UW56 229 aa10.83□□□□□ -0.68
CDH11-209ENST00000564317 SLC25A29Q8N8R3 303 aa10.83□□□□□ -0.68
CDH11-209ENST00000564317 APLNQ9ULZ1 77 aa10.83□□□□□ -0.68
CDH11-209ENST00000564317 A0A1B0GXF2 115 aa10.82□□□□□ -0.68
CDH11-209ENST00000564317 MGPP08493 103 aa10.82□□□□□ -0.68
CDH11-209ENST00000564317 SMIM17P0DL12 118 aa10.82□□□□□ -0.68
CDH11-209ENST00000564317 SLAQ13239 276 aa10.82□□□□□ -0.68
CDH11-209ENST00000564317 ZNF56Q15929 161 aa10.82□□□□□ -0.68
CDH11-209ENST00000564317 IMMP2LQ96T52 175 aa10.82□□□□□ -0.68
CDH11-209ENST00000564317 DPH3P1Q9H4G8 78 aa10.82□□□□□ -0.68
CDH11-209ENST00000564317 Q9UF83 564 aa10.82□□□□□ -0.68
CDH11-209ENST00000564317 TRBV6-4A0A1B0GX49 114 aa10.81□□□□□ -0.68
CDH11-209ENST00000564317 H3BNG1 76 aa10.81□□□□□ -0.68
CDH11-209ENST00000564317 TMEM242Q9NWH2 141 aa10.81□□□□□ -0.68
CDH11-209ENST00000564317 K7EQD1 137 aa10.8□□□□□ -0.68
CDH11-209ENST00000564317 NUDT3O95989 172 aa10.8□□□□□ -0.68
CDH11-209ENST00000564317 P0DMU3 169 aa10.8□□□□□ -0.68
CDH11-209ENST00000564317 FAM231AP0DMU4 169 aa10.8□□□□□ -0.68
CDH11-209ENST00000564317 FAM231CP0DMU5 169 aa10.8□□□□□ -0.68
CDH11-209ENST00000564317 CAMPP49913 170 aa10.8□□□□□ -0.68
CDH11-209ENST00000564317 RAB4BP61018 213 aa10.8□□□□□ -0.68
CDH11-209ENST00000564317 RHOHQ15669 191 aa10.8□□□□□ -0.68
CDH11-209ENST00000564317 A0A096LPF7 62 aa10.79□□□□□ -0.68
CDH11-209ENST00000564317 F5H697 171 aa10.79□□□□□ -0.68
CDH11-209ENST00000564317 GYPEP15421 78 aa10.79□□□□□ -0.68
CDH11-209ENST00000564317 HBBP68871 147 aa10.79□□□□□ -0.68
CDH11-209ENST00000564317 SUMO4Q6EEV6 95 aa10.79□□□□□ -0.68
CDH11-209ENST00000564317 C15orf53Q8NAA6 179 aa10.79□□□□□ -0.68
CDH11-209ENST00000564317 TMEM191AQ9H0A3 160 aa10.79□□□□□ -0.68
CDH11-209ENST00000564317 URGCP-MRPS24S4R325 110 aa10.79□□□□□ -0.68
CDH11-209ENST00000564317 A0A1B0GW15 77 aa10.78□□□□□ -0.68
CDH11-209ENST00000564317 KCNIP4Q6PIL6 250 aa10.78□□□□□ -0.68
CDH11-209ENST00000564317 SMIM15Q7Z3B0 74 aa10.78□□□□□ -0.68
CDH11-209ENST00000564317 ATP5L2Q7Z4Y8 100 aa10.78□□□□□ -0.68
CDH11-209ENST00000564317 AMN1Q8IY45 258 aa10.78□□□□□ -0.68
CDH11-209ENST00000564317 GATD1Q8NB37 220 aa10.78□□□□□ -0.68
CDH11-209ENST00000564317 RNF185Q96GF1 192 aa10.78□□□□□ -0.68
CDH11-209ENST00000564317 BTF3L4Q96K17 158 aa10.78□□□□□ -0.68
CDH11-209ENST00000564317 PRADC1Q9BSG0 188 aa10.78□□□□□ -0.68
CDH11-209ENST00000564317 ICOSQ9Y6W8 199 aa10.78□□□□□ -0.68
CDH11-209ENST00000564317 PLECQ15149 4684 aaKnown RBP10.78□□□□□ -0.68
CDH11-209ENST00000564317 TRAV26-2A0A0B4J265 109 aa10.77□□□□□ -0.69
CDH11-209ENST00000564317 LINC00694P0DN24 101 aa10.77□□□□□ -0.69
CDH11-209ENST00000564317 TCTAP57738 103 aa10.77□□□□□ -0.69
CDH11-209ENST00000564317 GAGE12JA6NER3 117 aa10.76□□□□□ -0.69
CDH11-209ENST00000564317 M0QY20 66 aa10.76□□□□□ -0.69
CDH11-209ENST00000564317 S100PP25815 95 aa10.76□□□□□ -0.69
CDH11-209ENST00000564317 GAGE1Q13065 139 aa10.76□□□□□ -0.69
CDH11-209ENST00000564317 GAGE4Q13068 117 aa10.76□□□□□ -0.69
CDH11-209ENST00000564317 GAGE5Q13069 117 aa10.76□□□□□ -0.69
CDH11-209ENST00000564317 GAGE13Q4V321 117 aa10.76□□□□□ -0.69
CDH11-209ENST00000564317 TRAV9-1A0A075B6T8 112 aa10.75□□□□□ -0.69
CDH11-209ENST00000564317 TRBV10-1A0A0K0K1A3 114 aa10.75□□□□□ -0.69
CDH11-209ENST00000564317 GAS8-AS1O95177 125 aa10.75□□□□□ -0.69
CDH11-209ENST00000564317 S100A8P05109 93 aa10.75□□□□□ -0.69
CDH11-209ENST00000564317 RAB4AP20338 218 aa10.75□□□□□ -0.69
CDH11-209ENST00000564317 SRIP30626 198 aa10.75□□□□□ -0.69
CDH11-209ENST00000564317 MRPL23Q16540 153 aaKnown RBP10.75□□□□□ -0.69
CDH11-209ENST00000564317 NEXN-AS1Q8NBZ9 246 aa10.75□□□□□ -0.69
CDH11-209ENST00000564317 FAM104BQ5XKR9 115 aa10.74□□□□□ -0.69
CDH11-209ENST00000564317 CBLN2Q8IUK8 224 aa10.74□□□□□ -0.69
CDH11-209ENST00000564317 TGIF2-C20orf24A0A0A6YYL0 155 aa10.73□□□□□ -0.69
CDH11-209ENST00000564317 SMKR1H3BMG3 65 aa10.73□□□□□ -0.69
CDH11-209ENST00000564317 MRPL51Q4U2R6 128 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms