RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 LINC00612Q8N6U2 182 aa10.83□□□□□ -0.68
RNF40-205ENST00000563909 FAT3Q8TDW7 4589 aa10.82□□□□□ -0.68
RNF40-205ENST00000563909 TRGV1A0A0A0MS02 117 aa10.82□□□□□ -0.68
RNF40-205ENST00000563909 C19orf71A6NCJ1 209 aa10.82□□□□□ -0.68
RNF40-205ENST00000563909 DNLZQ5SXM8 178 aa10.82□□□□□ -0.68
RNF40-205ENST00000563909 TMSB15BA0A087X1C1 80 aa10.81□□□□□ -0.68
RNF40-205ENST00000563909 GAGE12BA1L429 117 aa10.81□□□□□ -0.68
RNF40-205ENST00000563909 M0R2P5 195 aa10.81□□□□□ -0.68
RNF40-205ENST00000563909 GAGE7O76087 117 aa10.81□□□□□ -0.68
RNF40-205ENST00000563909 CXCL1P09341 107 aa10.81□□□□□ -0.68
RNF40-205ENST00000563909 GAGE12FP0CL80 117 aa10.81□□□□□ -0.68
RNF40-205ENST00000563909 GAGE12GP0CL81 117 aa10.81□□□□□ -0.68
RNF40-205ENST00000563909 GAGE12IP0CL82 117 aa10.81□□□□□ -0.68
RNF40-205ENST00000563909 TMEM241Q24JQ0 296 aa10.81□□□□□ -0.68
RNF40-205ENST00000563909 Q6ZTI0 123 aa10.81□□□□□ -0.68
RNF40-205ENST00000563909 C9orf85Q96MD7 179 aa10.81□□□□□ -0.68
RNF40-205ENST00000563909 GRIFINA4D1Z8 144 aa10.8□□□□□ -0.68
RNF40-205ENST00000563909 K7EN84 100 aa10.8□□□□□ -0.68
RNF40-205ENST00000563909 SIVA1O15304 175 aa10.8□□□□□ -0.68
RNF40-205ENST00000563909 P01737 135 aa10.8□□□□□ -0.68
RNF40-205ENST00000563909 RNASE3P12724 160 aaKnown RBP10.8□□□□□ -0.68
RNF40-205ENST00000563909 RPS20P60866 119 aaKnown RBP10.8□□□□□ -0.68
RNF40-205ENST00000563909 NFE4Q86UQ8 179 aa10.8□□□□□ -0.68
RNF40-205ENST00000563909 MRPL16Q9NX20 251 aaKnown RBP10.8□□□□□ -0.68
RNF40-205ENST00000563909 IL36BQ9NZH7 164 aa10.8□□□□□ -0.68
RNF40-205ENST00000563909 TRGV2A0A075B6R0 118 aa10.79□□□□□ -0.68
RNF40-205ENST00000563909 XKRY2A2RUG3 117 aa10.79□□□□□ -0.68
RNF40-205ENST00000563909 OXTP01178 125 aa10.79□□□□□ -0.68
RNF40-205ENST00000563909 RPL19P84098 196 aaKnown RBP10.79□□□□□ -0.68
RNF40-205ENST00000563909 UQCC3Q6UW78 93 aa10.79□□□□□ -0.68
RNF40-205ENST00000563909 LINC01551Q86U37 167 aa10.79□□□□□ -0.68
RNF40-205ENST00000563909 NUDT10Q8NFP7 164 aa10.79□□□□□ -0.68
RNF40-205ENST00000563909 OR2D3Q8NGH3 330 aa10.79□□□□□ -0.68
RNF40-205ENST00000563909 RASL10AQ92737 203 aa10.79□□□□□ -0.68
RNF40-205ENST00000563909 PTH2Q96A98 100 aa10.79□□□□□ -0.68
RNF40-205ENST00000563909 NUDT11Q96G61 164 aa10.79□□□□□ -0.68
RNF40-205ENST00000563909 NAT8Q9UHE5 227 aa10.79□□□□□ -0.68
RNF40-205ENST00000563909 H3BVH4 76 aa10.78□□□□□ -0.68
RNF40-205ENST00000563909 ARMS2P0C7Q2 107 aa10.78□□□□□ -0.68
RNF40-205ENST00000563909 HOXA5P20719 270 aa10.78□□□□□ -0.68
RNF40-205ENST00000563909 FAM231DQ6ZW35 169 aa10.78□□□□□ -0.68
RNF40-205ENST00000563909 LINC00528Q8N1L1 170 aa10.78□□□□□ -0.68
RNF40-205ENST00000563909 IGLV5-52A0A0A0MRZ9 124 aa10.77□□□□□ -0.69
RNF40-205ENST00000563909 LINC00862A6NCI5 91 aa10.77□□□□□ -0.69
RNF40-205ENST00000563909 H3BNG1 76 aa10.77□□□□□ -0.69
RNF40-205ENST00000563909 SFTA3P0C7M3 94 aa10.77□□□□□ -0.69
RNF40-205ENST00000563909 ZNF876PQ49A33 203 aa10.77□□□□□ -0.69
RNF40-205ENST00000563909 COMMD7Q86VX2 200 aa10.77□□□□□ -0.69
RNF40-205ENST00000563909 RNASE7Q9H1E1 156 aaKnown RBP10.77□□□□□ -0.69
RNF40-205ENST00000563909 FAM30AQ9NZY2 134 aa10.77□□□□□ -0.69
RNF40-205ENST00000563909 DNAH8Q96JB1 4490 aa10.76□□□□□ -0.69
RNF40-205ENST00000563909 GATCO43716 136 aaKnown RBP10.76□□□□□ -0.69
RNF40-205ENST00000563909 RPL23P62829 140 aaKnown RBP10.76□□□□□ -0.69
RNF40-205ENST00000563909 PIK3CD-AS1Q5SR53 167 aa10.76□□□□□ -0.69
RNF40-205ENST00000563909 RPP21Q9H633 154 aaKnown RBP10.76□□□□□ -0.69
RNF40-205ENST00000563909 PHLDA3Q9Y5J5 127 aa10.76□□□□□ -0.69
RNF40-205ENST00000563909 LRP2P98164 4655 aa10.76□□□□□ -0.69
RNF40-205ENST00000563909 ADIRFQ15847 76 aa10.75□□□□□ -0.69
RNF40-205ENST00000563909 TRAV4A0A0B4J268 109 aa10.74□□□□□ -0.69
RNF40-205ENST00000563909 SNAI2O43623 268 aa10.74□□□□□ -0.69
RNF40-205ENST00000563909 OR5AL1P0C617 328 aa10.74□□□□□ -0.69
RNF40-205ENST00000563909 ZFP82Q8N141 532 aa10.74□□□□□ -0.69
RNF40-205ENST00000563909 C15orf54Q8N8G6 183 aa10.74□□□□□ -0.69
RNF40-205ENST00000563909 ISOC2Q96AB3 205 aa10.74□□□□□ -0.69
RNF40-205ENST00000563909 SSBP4Q9BWG4 385 aaPredicted RBP10.74□□□□□ -0.69
RNF40-205ENST00000563909 OSTCQ9NRP0 149 aa10.74□□□□□ -0.69
RNF40-205ENST00000563909 CIDEAO60543 219 aa10.73□□□□□ -0.69
RNF40-205ENST00000563909 NXPH4O95158 308 aa10.73□□□□□ -0.69
RNF40-205ENST00000563909 GZMBP10144 247 aa10.73□□□□□ -0.69
RNF40-205ENST00000563909 CT83Q5H943 113 aa10.73□□□□□ -0.69
RNF40-205ENST00000563909 FER1L6-AS1Q8NA97 138 aa10.73□□□□□ -0.69
RNF40-205ENST00000563909 OR4C5Q8NGB2 326 aa10.73□□□□□ -0.69
RNF40-205ENST00000563909 A0A096LPF7 62 aa10.72□□□□□ -0.69
RNF40-205ENST00000563909 TMEM218A2RU14 115 aa10.72□□□□□ -0.69
RNF40-205ENST00000563909 A8MWL6 223 aa10.72□□□□□ -0.69
RNF40-205ENST00000563909 A8MWV9 139 aa10.72□□□□□ -0.69
RNF40-205ENST00000563909 F2Z2F3 143 aa10.72□□□□□ -0.69
RNF40-205ENST00000563909 RS1O15537 224 aa10.72□□□□□ -0.69
RNF40-205ENST00000563909 IGHV3-53P01767 116 aa10.72□□□□□ -0.69
RNF40-205ENST00000563909 IGLC6P0CF74 106 aa10.72□□□□□ -0.69
RNF40-205ENST00000563909 DMRTA1Q5VZB9 504 aa10.72□□□□□ -0.69
RNF40-205ENST00000563909 SFRP2Q96HF1 295 aa10.72□□□□□ -0.69
RNF40-205ENST00000563909 M0R381 172 aa10.71□□□□□ -0.69
RNF40-205ENST00000563909 PNRC1Q12796 327 aaPredicted RBP10.71□□□□□ -0.69
RNF40-205ENST00000563909 SLAQ13239 276 aa10.71□□□□□ -0.69
RNF40-205ENST00000563909 SPANXN1Q5VSR9 72 aa10.71□□□□□ -0.69
RNF40-205ENST00000563909 OR10G8Q8NGN5 311 aa10.71□□□□□ -0.69
RNF40-205ENST00000563909 VSIG2Q96IQ7 327 aa10.71□□□□□ -0.69
RNF40-205ENST00000563909 ZNF479Q96JC4 524 aa10.71□□□□□ -0.69
RNF40-205ENST00000563909 TPPP3Q9BW30 176 aa10.71□□□□□ -0.69
RNF40-205ENST00000563909 TRGV4A0A0C4DH28 118 aa10.7□□□□□ -0.7
RNF40-205ENST00000563909 F8W036 122 aa10.7□□□□□ -0.7
RNF40-205ENST00000563909 CACNG7P62955 275 aa10.7□□□□□ -0.7
RNF40-205ENST00000563909 CFAP126Q5VTH2 177 aa10.7□□□□□ -0.7
RNF40-205ENST00000563909 OR10AG1Q8NH19 301 aa10.7□□□□□ -0.7
RNF40-205ENST00000563909 NTN5Q8WTR8 489 aaPredicted RBP10.7□□□□□ -0.7
RNF40-205ENST00000563909 TRAV9-2A0A087WT02 112 aa10.69□□□□□ -0.7
RNF40-205ENST00000563909 FHL2Q14192 279 aa10.69□□□□□ -0.7
RNF40-205ENST00000563909 WDR73Q6P4I2 378 aa10.69□□□□□ -0.7
RNF40-205ENST00000563909 LYZL1Q6UWQ5 148 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms