RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 BAALCQ8WXS3 180 aa8.99□□□□□ -0.97
ABCA3-203ENST00000563623 SIRPDQ9H106 197 aa8.99□□□□□ -0.97
ABCA3-203ENST00000563623 TP53TG1Q9Y2A0 90 aa8.99□□□□□ -0.97
ABCA3-203ENST00000563623 CENPVL3A0A0U1RRI6 287 aa8.99□□□□□ -0.97
ABCA3-203ENST00000563623 EBI3Q14213 229 aa8.99□□□□□ -0.97
ABCA3-203ENST00000563623 LINC00477Q96M19 166 aa8.99□□□□□ -0.97
ABCA3-203ENST00000563623 HTN1P15515 57 aa8.98□□□□□ -0.97
ABCA3-203ENST00000563623 ADORA2A-AS1P86434 159 aa8.98□□□□□ -0.97
ABCA3-203ENST00000563623 FAM159AQ6UWV7 190 aa8.98□□□□□ -0.97
ABCA3-203ENST00000563623 CD7P09564 240 aa8.98□□□□□ -0.97
ABCA3-203ENST00000563623 VCX2Q9H322 139 aa8.98□□□□□ -0.97
ABCA3-203ENST00000563623 RPL39P62891 51 aaKnown RBP8.98□□□□□ -0.97
ABCA3-203ENST00000563623 SPXQ9BT56 116 aa8.98□□□□□ -0.97
ABCA3-203ENST00000563623 DLX4Q92988 240 aaPredicted RBP8.97□□□□□ -0.97
ABCA3-203ENST00000563623 COL12A1Q99715 3063 aa8.97□□□□□ -0.97
ABCA3-203ENST00000563623 TRBV7-3A0A075B6L6 115 aa8.97□□□□□ -0.97
ABCA3-203ENST00000563623 TRAV12-3A0A0B4J271 114 aa8.97□□□□□ -0.97
ABCA3-203ENST00000563623 OVOL1O14753 267 aa8.97□□□□□ -0.97
ABCA3-203ENST00000563623 Q1RN00 199 aa8.97□□□□□ -0.97
ABCA3-203ENST00000563623 ZFP2Q6ZN57 461 aa8.97□□□□□ -0.97
ABCA3-203ENST00000563623 TOMM6Q96B49 74 aa8.97□□□□□ -0.97
ABCA3-203ENST00000563623 PTPN13Q12923 2485 aa8.97□□□□□ -0.97
ABCA3-203ENST00000563623 IFITM1P13164 125 aa8.96□□□□□ -0.97
ABCA3-203ENST00000563623 ZNF56Q15929 161 aa8.96□□□□□ -0.97
ABCA3-203ENST00000563623 NEXN-AS1Q8NBZ9 246 aa8.96□□□□□ -0.97
ABCA3-203ENST00000563623 C11orf86A6NJI1 115 aa8.96□□□□□ -0.98
ABCA3-203ENST00000563623 ZFAND2AQ8N6M9 145 aa8.96□□□□□ -0.98
ABCA3-203ENST00000563623 MOB4Q9Y3A3 225 aa8.96□□□□□ -0.98
ABCA3-203ENST00000563623 TRAV12-1A0A0B4J245 112 aa8.95□□□□□ -0.98
ABCA3-203ENST00000563623 LINC01546A6NGU7 62 aa8.95□□□□□ -0.98
ABCA3-203ENST00000563623 C5orf56Q8N8D9 126 aa8.95□□□□□ -0.98
ABCA3-203ENST00000563623 MRPL53Q96EL3 112 aaKnown RBP8.95□□□□□ -0.98
ABCA3-203ENST00000563623 RHPN1-AS1Q9BWJ2 59 aa8.95□□□□□ -0.98
ABCA3-203ENST00000563623 EPG5Q9HCE0 2579 aa8.95□□□□□ -0.98
ABCA3-203ENST00000563623 LGALS3P17931 250 aaKnown RBP8.95□□□□□ -0.98
ABCA3-203ENST00000563623 BEX4Q9NWD9 120 aaPredicted RBP8.95□□□□□ -0.98
ABCA3-203ENST00000563623 A0A1W2PPR1 153 aa8.95□□□□□ -0.98
ABCA3-203ENST00000563623 RAX2Q96IS3 184 aa8.95□□□□□ -0.98
ABCA3-203ENST00000563623 PSMG3-AS1Q96PY0 264 aa8.95□□□□□ -0.98
ABCA3-203ENST00000563623 CENPEQ02224 2701 aa8.95□□□□□ -0.98
ABCA3-203ENST00000563623 NACAE9PAV3 2078 aa8.95□□□□□ -0.98
ABCA3-203ENST00000563623 C11orf71Q6IPW1 123 aa8.94□□□□□ -0.98
ABCA3-203ENST00000563623 CDIP1Q9H305 208 aa8.94□□□□□ -0.98
ABCA3-203ENST00000563623 VPREB3Q9UKI3 123 aa8.94□□□□□ -0.98
ABCA3-203ENST00000563623 NDUFV3P56181 108 aaKnown RBP8.94□□□□□ -0.98
ABCA3-203ENST00000563623 MORN3Q6PF18 240 aaPredicted RBP8.94□□□□□ -0.98
ABCA3-203ENST00000563623 TRAV12-2A0A075B6T6 113 aa8.93□□□□□ -0.98
ABCA3-203ENST00000563623 TRAV2A0A0B4J234 112 aa8.93□□□□□ -0.98
ABCA3-203ENST00000563623 ZNF688P0C7X2 276 aa8.93□□□□□ -0.98
ABCA3-203ENST00000563623 KLRB1Q12918 225 aa8.93□□□□□ -0.98
ABCA3-203ENST00000563623 FBXL19-AS1Q494R0 122 aa8.93□□□□□ -0.98
ABCA3-203ENST00000563623 C5orf47Q569G3 176 aa8.93□□□□□ -0.98
ABCA3-203ENST00000563623 LYRM7Q5U5X0 104 aa8.93□□□□□ -0.98
ABCA3-203ENST00000563623 PPDPFLQ8WWR9 84 aa8.93□□□□□ -0.98
ABCA3-203ENST00000563623 SDHAF1A6NFY7 115 aa8.93□□□□□ -0.98
ABCA3-203ENST00000563623 H3BUX3 64 aa8.93□□□□□ -0.98
ABCA3-203ENST00000563623 OPRPNQ99935 248 aaPredicted RBP8.93□□□□□ -0.98
ABCA3-203ENST00000563623 TMEM262E9PQX1 116 aa8.92□□□□□ -0.98
ABCA3-203ENST00000563623 PPP1R17O96001 155 aa8.92□□□□□ -0.98
ABCA3-203ENST00000563623 IGHV4-4A0A075B6R2 117 aa8.92□□□□□ -0.98
ABCA3-203ENST00000563623 FAM223BA6NKX1 122 aa8.92□□□□□ -0.98
ABCA3-203ENST00000563623 PMVKQ15126 192 aa8.92□□□□□ -0.98
ABCA3-203ENST00000563623 FAM223AQ8IWN6 122 aa8.92□□□□□ -0.98
ABCA3-203ENST00000563623 PRSS2P07478 247 aa8.92□□□□□ -0.98
ABCA3-203ENST00000563623 A4D1N5 150 aa8.91□□□□□ -0.98
ABCA3-203ENST00000563623 A8MWV9 139 aa8.91□□□□□ -0.98
ABCA3-203ENST00000563623 VCYO14598 125 aa8.91□□□□□ -0.98
ABCA3-203ENST00000563623 BLCAPP62952 87 aa8.91□□□□□ -0.98
ABCA3-203ENST00000563623 SUMO4Q6EEV6 95 aa8.91□□□□□ -0.98
ABCA3-203ENST00000563623 LENEPQ9Y5L5 61 aa8.91□□□□□ -0.98
ABCA3-203ENST00000563623 RNASE3P12724 160 aaKnown RBP8.91□□□□□ -0.98
ABCA3-203ENST00000563623 U3KQE9 123 aa8.91□□□□□ -0.98
ABCA3-203ENST00000563623 SVEP1Q4LDE5 3571 aa8.91□□□□□ -0.98
ABCA3-203ENST00000563623 C2CD3Q4AC94 2353 aa8.91□□□□□ -0.98
ABCA3-203ENST00000563623 NDUFA4O00483 81 aa8.91□□□□□ -0.98
ABCA3-203ENST00000563623 EDN2P20800 178 aa8.91□□□□□ -0.98
ABCA3-203ENST00000563623 LMO4P61968 165 aa8.91□□□□□ -0.98
ABCA3-203ENST00000563623 LY6DQ14210 128 aa8.91□□□□□ -0.98
ABCA3-203ENST00000563623 Q6ZS46 218 aa8.91□□□□□ -0.98
ABCA3-203ENST00000563623 KLK9Q9UKQ9 250 aa8.91□□□□□ -0.98
ABCA3-203ENST00000563623 IGHV3-73A0A0B4J1V6 119 aa8.9□□□□□ -0.98
ABCA3-203ENST00000563623 C10orf126Q8N4M7 172 aa8.9□□□□□ -0.98
ABCA3-203ENST00000563623 ITLN2Q8WWU7 325 aaPredicted RBP8.9□□□□□ -0.98
ABCA3-203ENST00000563623 CCDC168Q8NDH2 2452 aa8.9□□□□□ -0.99
ABCA3-203ENST00000563623 PAPPA-AS1Q5QFB9 102 aa8.9□□□□□ -0.99
ABCA3-203ENST00000563623 ADARB2-AS1A8MUL3 147 aa8.89□□□□□ -0.99
ABCA3-203ENST00000563623 GPHB5Q86YW7 130 aa8.89□□□□□ -0.99
ABCA3-203ENST00000563623 J3QQQ9 107 aa8.89□□□□□ -0.99
ABCA3-203ENST00000563623 MUC4Q99102 2169 aa8.89□□□□□ -0.99
ABCA3-203ENST00000563623 USP9YO00507 2555 aaPredicted RBP8.89□□□□□ -0.99
ABCA3-203ENST00000563623 HRNRQ86YZ3 2850 aaPredicted RBP8.88□□□□□ -0.99
ABCA3-203ENST00000563623 C9JAW5 83 aa8.88□□□□□ -0.99
ABCA3-203ENST00000563623 NFE4Q86UQ8 179 aa8.88□□□□□ -0.99
ABCA3-203ENST00000563623 AJUBAQ96IF1 538 aa8.88□□□□□ -0.99
ABCA3-203ENST00000563623 PRO0461Q9UI25 63 aa8.88□□□□□ -0.99
ABCA3-203ENST00000563623 IGHV1-69DA0A0B4J2H0 117 aa8.88□□□□□ -0.99
ABCA3-203ENST00000563623 TCL1BO95988 128 aa8.88□□□□□ -0.99
ABCA3-203ENST00000563623 IGHV1-69P01742 117 aa8.88□□□□□ -0.99
ABCA3-203ENST00000563623 IGHV4-39P01824 125 aa8.88□□□□□ -0.99
ABCA3-203ENST00000563623 IGHV4-38-2P0DP08 117 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms