RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 ZNF56Q15929 161 aa9.78□□□□□ -0.84
CCDC187-201ENST00000563590 C15orf32Q32M92 178 aa9.78□□□□□ -0.84
CCDC187-201ENST00000563590 NUP37Q8NFH4 326 aa9.78□□□□□ -0.84
CCDC187-201ENST00000563590 ZMAT4Q9H898 229 aa9.78□□□□□ -0.84
CCDC187-201ENST00000563590 PRO1854Q9UHT4 67 aa9.78□□□□□ -0.84
CCDC187-201ENST00000563590 ITPR1Q14643 2758 aa9.77□□□□□ -0.84
CCDC187-201ENST00000563590 TNFRSF13BO14836 293 aaPredicted RBP9.77□□□□□ -0.84
CCDC187-201ENST00000563590 NRGNQ92686 78 aa9.77□□□□□ -0.84
CCDC187-201ENST00000563590 C11orf21Q9P2W6 132 aa9.77□□□□□ -0.84
CCDC187-201ENST00000563590 IGLV1-47P01700 117 aa9.77□□□□□ -0.85
CCDC187-201ENST00000563590 CRIP2P52943 208 aaPredicted RBP9.77□□□□□ -0.85
CCDC187-201ENST00000563590 MEIG1Q5JSS6 88 aa9.77□□□□□ -0.85
CCDC187-201ENST00000563590 TRBV7-9A0A0J9YWB2 115 aa9.77□□□□□ -0.85
CCDC187-201ENST00000563590 RPL39P62891 51 aaKnown RBP9.77□□□□□ -0.85
CCDC187-201ENST00000563590 Q6ZS46 218 aa9.77□□□□□ -0.85
CCDC187-201ENST00000563590 NDUFA11Q86Y39 141 aa9.77□□□□□ -0.85
CCDC187-201ENST00000563590 PIFOQ8TCI5 191 aa9.77□□□□□ -0.85
CCDC187-201ENST00000563590 A0A0U1RRA0 63 aa9.76□□□□□ -0.85
CCDC187-201ENST00000563590 C11orf86A6NJI1 115 aa9.76□□□□□ -0.85
CCDC187-201ENST00000563590 TMEM95Q3KNT9 176 aa9.76□□□□□ -0.85
CCDC187-201ENST00000563590 VMO1Q7Z5L0 202 aa9.76□□□□□ -0.85
CCDC187-201ENST00000563590 BAALCQ8WXS3 180 aa9.76□□□□□ -0.85
CCDC187-201ENST00000563590 CFAP161Q6P656 301 aa9.76□□□□□ -0.85
CCDC187-201ENST00000563590 ZNF575Q86XF7 245 aa9.76□□□□□ -0.85
CCDC187-201ENST00000563590 TEX49A0A1B0GTD5 131 aa9.76□□□□□ -0.85
CCDC187-201ENST00000563590 A4D1N5 150 aa9.76□□□□□ -0.85
CCDC187-201ENST00000563590 IGF1P05019 195 aa9.76□□□□□ -0.85
CCDC187-201ENST00000563590 NDUFV3P56181 108 aaKnown RBP9.76□□□□□ -0.85
CCDC187-201ENST00000563590 LINC01559Q495D7 138 aa9.76□□□□□ -0.85
CCDC187-201ENST00000563590 BPESC1Q9GZL8 116 aa9.76□□□□□ -0.85
CCDC187-201ENST00000563590 ANKRD17O75179 2603 aaKnown RBP9.75□□□□□ -0.85
CCDC187-201ENST00000563590 UTP20O75691 2785 aaKnown RBP9.75□□□□□ -0.85
CCDC187-201ENST00000563590 CRLF1O75462 422 aa9.75□□□□□ -0.85
CCDC187-201ENST00000563590 ASIPP42127 132 aa9.75□□□□□ -0.85
CCDC187-201ENST00000563590 C2orf82Q6UX34 121 aa9.75□□□□□ -0.85
CCDC187-201ENST00000563590 AJUBAQ96IF1 538 aa9.75□□□□□ -0.85
CCDC187-201ENST00000563590 METTL26Q96S19 204 aa9.75□□□□□ -0.85
CCDC187-201ENST00000563590 VCX2Q9H322 139 aa9.75□□□□□ -0.85
CCDC187-201ENST00000563590 C5orf64Q2M2E5 130 aa9.74□□□□□ -0.85
CCDC187-201ENST00000563590 C11orf44Q8N8P7 122 aa9.74□□□□□ -0.85
CCDC187-201ENST00000563590 C10orf126Q8N4M7 172 aa9.74□□□□□ -0.85
CCDC187-201ENST00000563590 SMAD5-AS1Q9Y6J3 95 aa9.74□□□□□ -0.85
CCDC187-201ENST00000563590 ATP6V0E2Q8NHE4 81 aa9.73□□□□□ -0.85
CCDC187-201ENST00000563590 ZANQ9Y493 2812 aa9.73□□□□□ -0.85
CCDC187-201ENST00000563590 GNRH2O43555 120 aa9.73□□□□□ -0.85
CCDC187-201ENST00000563590 RPL13AP40429 203 aaKnown RBP9.73□□□□□ -0.85
CCDC187-201ENST00000563590 ADORA2A-AS1P86434 159 aa9.73□□□□□ -0.85
CCDC187-201ENST00000563590 NRACQ8N912 160 aa9.73□□□□□ -0.85
CCDC187-201ENST00000563590 OR10J6PQ8NGY7 276 aa9.73□□□□□ -0.85
CCDC187-201ENST00000563590 RASL10AQ92737 203 aa9.73□□□□□ -0.85
CCDC187-201ENST00000563590 OPRPNQ99935 248 aaPredicted RBP9.73□□□□□ -0.85
CCDC187-201ENST00000563590 F6UB75 175 aa9.73□□□□□ -0.85
CCDC187-201ENST00000563590 CTSGP08311 255 aa9.73□□□□□ -0.85
CCDC187-201ENST00000563590 CFC1BP0CG36 223 aa9.73□□□□□ -0.85
CCDC187-201ENST00000563590 CFC1P0CG37 223 aa9.73□□□□□ -0.85
CCDC187-201ENST00000563590 TMEM190Q8WZ59 177 aa9.73□□□□□ -0.85
CCDC187-201ENST00000563590 FANCD2OSQ96PS1 177 aa9.73□□□□□ -0.85
CCDC187-201ENST00000563590 KAAG1Q9UBP8 84 aa9.73□□□□□ -0.85
CCDC187-201ENST00000563590 DPH3P1Q9H4G8 78 aa9.72□□□□□ -0.85
CCDC187-201ENST00000563590 IGHG4P01861 327 aa9.72□□□□□ -0.85
CCDC187-201ENST00000563590 RPL32P62910 135 aaKnown RBP9.72□□□□□ -0.85
CCDC187-201ENST00000563590 DUX3Q96PT4 197 aa9.72□□□□□ -0.85
CCDC187-201ENST00000563590 SLC50A1Q9BRV3 221 aa9.72□□□□□ -0.85
CCDC187-201ENST00000563590 COX8CQ7Z4L0 72 aa9.71□□□□□ -0.85
CCDC187-201ENST00000563590 Q8N1Y9 231 aa9.71□□□□□ -0.85
CCDC187-201ENST00000563590 CHCHD5Q9BSY4 110 aa9.71□□□□□ -0.85
CCDC187-201ENST00000563590 SPXQ9BT56 116 aa9.71□□□□□ -0.85
CCDC187-201ENST00000563590 TRAV8-3A0A0A6YYJ7 113 aa9.71□□□□□ -0.86
CCDC187-201ENST00000563590 LINC01546A6NGU7 62 aa9.71□□□□□ -0.86
CCDC187-201ENST00000563590 J3QQQ9 107 aa9.71□□□□□ -0.86
CCDC187-201ENST00000563590 JPT2Q9H910 190 aa9.71□□□□□ -0.86
CCDC187-201ENST00000563590 F8W735 103 aaPredicted RBP9.7□□□□□ -0.86
CCDC187-201ENST00000563590 RNASE13Q5GAN3 156 aaKnown RBP9.7□□□□□ -0.86
CCDC187-201ENST00000563590 NEXN-AS1Q8NBZ9 246 aa9.7□□□□□ -0.86
CCDC187-201ENST00000563590 IGLV2-18A0A075B6J9 118 aa9.7□□□□□ -0.86
CCDC187-201ENST00000563590 A0A0J9YY99 117 aa9.7□□□□□ -0.86
CCDC187-201ENST00000563590 SAA4P35542 130 aa9.7□□□□□ -0.86
CCDC187-201ENST00000563590 LINC00477Q96M19 166 aa9.7□□□□□ -0.86
CCDC187-201ENST00000563590 H3BMM0 161 aa9.7□□□□□ -0.86
CCDC187-201ENST00000563590 RS1O15537 224 aa9.7□□□□□ -0.86
CCDC187-201ENST00000563590 ZFP36P26651 326 aaKnown RBP9.7□□□□□ -0.86
CCDC187-201ENST00000563590 ATXN8Q156A1 80 aa9.7□□□□□ -0.86
CCDC187-201ENST00000563590 MUSTN1Q8IVN3 82 aa9.7□□□□□ -0.86
CCDC187-201ENST00000563590 UBE2WQ96B02 151 aa9.7□□□□□ -0.86
CCDC187-201ENST00000563590 COX6CP09669 75 aa9.69□□□□□ -0.86
CCDC187-201ENST00000563590 CNFNQ9BYD5 112 aa9.69□□□□□ -0.86
CCDC187-201ENST00000563590 ATP5J2P56134 94 aa9.69□□□□□ -0.86
CCDC187-201ENST00000563590 MRPL23Q16540 153 aaKnown RBP9.69□□□□□ -0.86
CCDC187-201ENST00000563590 CITED1Q99966 193 aa9.69□□□□□ -0.86
CCDC187-201ENST00000563590 IGLV11-55A0A075B6I3 123 aa9.69□□□□□ -0.86
CCDC187-201ENST00000563590 ATP6V0E1O15342 81 aa9.69□□□□□ -0.86
CCDC187-201ENST00000563590 TOMM6Q96B49 74 aa9.69□□□□□ -0.86
CCDC187-201ENST00000563590 FLNBO75369 2602 aaKnown RBP9.69□□□□□ -0.86
CCDC187-201ENST00000563590 PMVKQ15126 192 aa9.68□□□□□ -0.86
CCDC187-201ENST00000563590 PSMG3-AS1Q96PY0 264 aa9.68□□□□□ -0.86
CCDC187-201ENST00000563590 TRAV12-1A0A0B4J245 112 aa9.68□□□□□ -0.86
CCDC187-201ENST00000563590 CD7P09564 240 aa9.68□□□□□ -0.86
CCDC187-201ENST00000563590 RBAKDNA6NC62 111 aa9.68□□□□□ -0.86
CCDC187-201ENST00000563590 HECTD1Q9ULT8 2610 aa9.67□□□□□ -0.86
CCDC187-201ENST00000563590 IGHV3-73A0A0B4J1V6 119 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms