RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 LAGE3Q14657 143 aa14.07□□□□□ -0.16
SMPD3-203ENST00000563226 LGALS9BQ3B8N2 356 aa14.07□□□□□ -0.16
SMPD3-203ENST00000563226 LGALS9CQ6DKI2 356 aa14.07□□□□□ -0.16
SMPD3-203ENST00000563226 ST20Q9HBF5 79 aa14.07□□□□□ -0.16
SMPD3-203ENST00000563226 HNRNPA3P51991 378 aaKnown RBP14.06□□□□□ -0.16
SMPD3-203ENST00000563226 SPAG8Q99932 426 aaPredicted RBP14.06□□□□□ -0.16
SMPD3-203ENST00000563226 GOLT1BQ9Y3E0 138 aa14.06□□□□□ -0.16
SMPD3-203ENST00000563226 NOTCH2Q04721 2471 aa14.06□□□□□ -0.16
SMPD3-203ENST00000563226 PRM2P04554 102 aa14.05□□□□□ -0.16
SMPD3-203ENST00000563226 SMIM17P0DL12 118 aa14.05□□□□□ -0.16
SMPD3-203ENST00000563226 ODF3L2Q3SX64 289 aa14.05□□□□□ -0.16
SMPD3-203ENST00000563226 LBHQ53QV2 105 aaPredicted RBP14.05□□□□□ -0.16
SMPD3-203ENST00000563226 SETXQ7Z333 2677 aaKnown RBP14.05□□□□□ -0.16
SMPD3-203ENST00000563226 HSBP1L1C9JCN9 74 aa14.05□□□□□ -0.16
SMPD3-203ENST00000563226 SUMO4Q6EEV6 95 aa14.05□□□□□ -0.16
SMPD3-203ENST00000563226 C20orf78Q9BR46 151 aa14.05□□□□□ -0.16
SMPD3-203ENST00000563226 DKK2Q9UBU2 259 aa14.05□□□□□ -0.16
SMPD3-203ENST00000563226 NIPBLQ6KC79 2804 aaeCLIP14.04□□□□□ -0.16
SMPD3-203ENST00000563226 CBY3A6NI87 242 aa14.04□□□□□ -0.16
SMPD3-203ENST00000563226 HTN1P15515 57 aa14.04□□□□□ -0.16
SMPD3-203ENST00000563226 ADARB2-AS1A8MUL3 147 aa14.03□□□□□ -0.16
SMPD3-203ENST00000563226 PROK1P58294 105 aa14.03□□□□□ -0.16
SMPD3-203ENST00000563226 FAM74A4Q5TZK3 123 aa14.03□□□□□ -0.16
SMPD3-203ENST00000563226 NEGR1Q7Z3B1 354 aa14.03□□□□□ -0.16
SMPD3-203ENST00000563226 TRGV11A0A075B6L2 103 aa14.02□□□□□ -0.16
SMPD3-203ENST00000563226 NDUFA7O95182 113 aa14.02□□□□□ -0.16
SMPD3-203ENST00000563226 BATFQ16520 125 aa14.02□□□□□ -0.16
SMPD3-203ENST00000563226 TRAV25A0A0B4J276 109 aa14.02□□□□□ -0.17
SMPD3-203ENST00000563226 NUDT3O95989 172 aa14.02□□□□□ -0.17
SMPD3-203ENST00000563226 MRPL52Q86TS9 123 aaKnown RBP14.02□□□□□ -0.17
SMPD3-203ENST00000563226 SYT8Q8NBV8 401 aa14.02□□□□□ -0.17
SMPD3-203ENST00000563226 F5H697 171 aa14.01□□□□□ -0.17
SMPD3-203ENST00000563226 CRYGDP07320 174 aa14.01□□□□□ -0.17
SMPD3-203ENST00000563226 ANKRD39Q53RE8 183 aa14.01□□□□□ -0.17
SMPD3-203ENST00000563226 CSTL1Q9H114 145 aa14.01□□□□□ -0.17
SMPD3-203ENST00000563226 TCTAP57738 103 aa14□□□□□ -0.17
SMPD3-203ENST00000563226 ODF1Q14990 250 aa14□□□□□ -0.17
SMPD3-203ENST00000563226 NSUN5P1Q3KNT7 163 aa14□□□□□ -0.17
SMPD3-203ENST00000563226 ZNF876PQ49A33 203 aa14□□□□□ -0.17
SMPD3-203ENST00000563226 PRSS1P07477 247 aa14□□□□□ -0.17
SMPD3-203ENST00000563226 STPG4Q8N801 248 aa14□□□□□ -0.17
SMPD3-203ENST00000563226 KRTAP10-3P60369 221 aa13.99□□□□□ -0.17
SMPD3-203ENST00000563226 DEFB104AQ8WTQ1 72 aa13.99□□□□□ -0.17
SMPD3-203ENST00000563226 MRPS16Q9Y3D3 137 aaKnown RBP13.99□□□□□ -0.17
SMPD3-203ENST00000563226 PPP1R17O96001 155 aa13.98□□□□□ -0.17
SMPD3-203ENST00000563226 ZNF56Q15929 161 aa13.98□□□□□ -0.17
SMPD3-203ENST00000563226 ORMDL2Q53FV1 153 aa13.98□□□□□ -0.17
SMPD3-203ENST00000563226 MORN3Q6PF18 240 aaPredicted RBP13.98□□□□□ -0.17
SMPD3-203ENST00000563226 SLC25A34Q6PIV7 304 aa13.98□□□□□ -0.17
SMPD3-203ENST00000563226 INAFM1C9JVW0 142 aa13.97□□□□□ -0.17
SMPD3-203ENST00000563226 SAP30O75446 220 aa13.97□□□□□ -0.17
SMPD3-203ENST00000563226 ATP5LO75964 103 aa13.97□□□□□ -0.17
SMPD3-203ENST00000563226 POLR2KP53803 58 aaKnown RBP13.96□□□□□ -0.17
SMPD3-203ENST00000563226 NUTF2P61970 127 aaKnown RBP13.96□□□□□ -0.17
SMPD3-203ENST00000563226 TOMM6Q96B49 74 aa13.96□□□□□ -0.17
SMPD3-203ENST00000563226 JMJD8Q96S16 334 aa13.96□□□□□ -0.17
SMPD3-203ENST00000563226 ZMAT4Q9H898 229 aa13.96□□□□□ -0.17
SMPD3-203ENST00000563226 OR11H12B2RN74 326 aa13.95□□□□□ -0.18
SMPD3-203ENST00000563226 M0QY20 66 aa13.95□□□□□ -0.18
SMPD3-203ENST00000563226 XCL2Q9UBD3 114 aa13.95□□□□□ -0.18
SMPD3-203ENST00000563226 COX8AP10176 69 aa13.95□□□□□ -0.18
SMPD3-203ENST00000563226 HINT1P49773 126 aaPredicted RBP13.95□□□□□ -0.18
SMPD3-203ENST00000563226 LURAP1LQ8IV03 231 aa13.95□□□□□ -0.18
SMPD3-203ENST00000563226 STHQ8IWL8 128 aa13.95□□□□□ -0.18
SMPD3-203ENST00000563226 LINC01587Q99440 93 aa13.95□□□□□ -0.18
SMPD3-203ENST00000563226 NACAE9PAV3 2078 aa13.95□□□□□ -0.18
SMPD3-203ENST00000563226 K7EMI3 77 aa13.94□□□□□ -0.18
SMPD3-203ENST00000563226 INSP01308 110 aa13.94□□□□□ -0.18
SMPD3-203ENST00000563226 C2orf66Q6UXQ4 117 aa13.94□□□□□ -0.18
SMPD3-203ENST00000563226 SDHAF1A6NFY7 115 aa13.94□□□□□ -0.18
SMPD3-203ENST00000563226 RPL32P62910 135 aaKnown RBP13.94□□□□□ -0.18
SMPD3-203ENST00000563226 TRPT1Q86TN4 253 aaKnown RBP13.94□□□□□ -0.18
SMPD3-203ENST00000563226 CLUHP3Q96NS8 147 aa13.94□□□□□ -0.18
SMPD3-203ENST00000563226 FGF6P10767 208 aa13.93□□□□□ -0.18
SMPD3-203ENST00000563226 C11orf72Q8NBR9 251 aa13.93□□□□□ -0.18
SMPD3-203ENST00000563226 SCGB3A1Q96QR1 104 aa13.93□□□□□ -0.18
SMPD3-203ENST00000563226 MRPL35Q9NZE8 188 aaKnown RBP13.93□□□□□ -0.18
SMPD3-203ENST00000563226 NSD1Q96L73 2696 aaPredicted RBP13.93□□□□□ -0.18
SMPD3-203ENST00000563226 IGHV3-73A0A0B4J1V6 119 aa13.92□□□□□ -0.18
SMPD3-203ENST00000563226 TRBV6-5A0A0K0K1A5 114 aa13.92□□□□□ -0.18
SMPD3-203ENST00000563226 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.92□□□□□ -0.18
SMPD3-203ENST00000563226 IGLV1-51P01701 117 aa13.92□□□□□ -0.18
SMPD3-203ENST00000563226 ZNF415Q09FC8 603 aa13.92□□□□□ -0.18
SMPD3-203ENST00000563226 WFDC10AQ9H1F0 79 aa13.92□□□□□ -0.18
SMPD3-203ENST00000563226 HHLA3Q9XRX5 114 aa13.92□□□□□ -0.18
SMPD3-203ENST00000563226 JMJD1CQ15652 2540 aa13.91□□□□□ -0.18
SMPD3-203ENST00000563226 IGKCP01834 107 aa13.91□□□□□ -0.18
SMPD3-203ENST00000563226 FN1P02751 2386 aaKnown RBP13.91□□□□□ -0.18
SMPD3-203ENST00000563226 A0A087WX48 190 aa13.91□□□□□ -0.18
SMPD3-203ENST00000563226 M0R2P5 195 aa13.91□□□□□ -0.18
SMPD3-203ENST00000563226 VCYO14598 125 aa13.91□□□□□ -0.18
SMPD3-203ENST00000563226 ZFP2Q6ZN57 461 aa13.91□□□□□ -0.18
SMPD3-203ENST00000563226 C2orf91Q6ZV80 131 aa13.91□□□□□ -0.18
SMPD3-203ENST00000563226 C1orf158Q8N1D5 194 aa13.91□□□□□ -0.18
SMPD3-203ENST00000563226 LINC00467Q9BRT7 94 aa13.91□□□□□ -0.18
SMPD3-203ENST00000563226 TRBV27A0A0K0K1C4 114 aa13.9□□□□□ -0.18
SMPD3-203ENST00000563226 DPM2O94777 84 aa13.9□□□□□ -0.18
SMPD3-203ENST00000563226 AZU1P20160 251 aa13.9□□□□□ -0.18
SMPD3-203ENST00000563226 HIVEP1P15822 2718 aa13.9□□□□□ -0.18
SMPD3-203ENST00000563226 IGHV3OR16-12A0A075B7B8 117 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms