RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TRAV18A0A075B6X5 111 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 TRAV8-1A0A0A6YYK1 113 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 IGLV5-39A0A0G2JS06 123 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 MEIS3P1A6NDR6 274 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 CRYM-AS1A6NIL9 109 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 CEBPZOSA8MTT3 80 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 B4DEV8 164 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 M0R036 132 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 TAAR5O14804 337 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 IGKV1-5P01602 117 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 MBPP02686 304 aaPredicted RBP3.36□□□□□ -1.87
HERC1-213ENST00000561359 TRGC1P0CF51 173 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 TCL1AP56279 114 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 SSBP1Q04837 148 aaKnown RBP3.36□□□□□ -1.87
HERC1-213ENST00000561359 ELOBQ15370 118 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 PET117Q6UWS5 81 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 OR4D5Q8NGN0 318 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 OR52I2Q8NH67 350 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 TMEM18Q96B42 140 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 RMI2Q96E14 147 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 SLC35E1Q96K37 410 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 GPR82Q96P67 336 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 CYTL1Q9NRR1 136 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 TMEM242Q9NWH2 141 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 OR5AC2Q9NZP5 309 aa3.36□□□□□ -1.87
HERC1-213ENST00000561359 TRBV24-1A0A075B6N3 115 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 IGKV2D-24A0A075B6R9 120 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 IGKV1D-37A0A075B6S9 117 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 IGKV1OR2-108A0A075B7D4 117 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 TGIF2-C20orf24A0A0A6YYL0 155 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 LOC100131303A0A0U1RQF7 123 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 GGTLC3B5MD39 225 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 UMAD1C9J7I0 102 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 C9JQL5 133 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 S100A7P31151 101 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 LEPP41159 167 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 AKR1C3P42330 323 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 RPL29P47914 159 aaKnown RBP3.35□□□□□ -1.87
HERC1-213ENST00000561359 C14orf177Q52M58 125 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 FAM219AQ8IW50 185 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 C7orf33Q8WU49 177 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 MITD1Q8WV92 249 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 TMEM170AQ8WVE7 144 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 ZC2HC1AQ96GY0 325 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 SLC25A21Q9BQT8 299 aaPredicted RBP3.35□□□□□ -1.87
HERC1-213ENST00000561359 SPXQ9BT56 116 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 RBKSQ9H477 322 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 CST9LQ9H4G1 147 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 AUNIPQ9H7T9 357 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 LYRM2Q9NU23 88 aaPredicted RBP3.35□□□□□ -1.87
HERC1-213ENST00000561359 KIF25-AS1Q9Y6Z4 181 aa3.35□□□□□ -1.87
HERC1-213ENST00000561359 TRGC2P03986 189 aa3.34□□□□□ -1.87
HERC1-213ENST00000561359 ORM2P19652 201 aa3.34□□□□□ -1.87
HERC1-213ENST00000561359 RAB11AP62491 216 aa3.34□□□□□ -1.87
HERC1-213ENST00000561359 CYCSP99999 105 aaKnown RBP3.34□□□□□ -1.87
HERC1-213ENST00000561359 PRR4Q16378 134 aa3.34□□□□□ -1.87
HERC1-213ENST00000561359 ANXA2RQ3ZCQ2 193 aa3.34□□□□□ -1.87
HERC1-213ENST00000561359 TEX43Q6ZNM6 134 aa3.34□□□□□ -1.87
HERC1-213ENST00000561359 DAZ4Q86SG3 579 aaKnown RBP3.34□□□□□ -1.87
HERC1-213ENST00000561359 SELENOHQ8IZQ5 122 aaKnown RBP3.34□□□□□ -1.87
HERC1-213ENST00000561359 MTURNQ8N3F0 131 aa3.34□□□□□ -1.87
HERC1-213ENST00000561359 OR4C5Q8NGB2 326 aa3.34□□□□□ -1.87
HERC1-213ENST00000561359 OR5H2Q8NGV7 314 aa3.34□□□□□ -1.87
HERC1-213ENST00000561359 PPP1R1CQ8WVI7 109 aa3.34□□□□□ -1.87
HERC1-213ENST00000561359 TMED6Q8WW62 240 aa3.34□□□□□ -1.87
HERC1-213ENST00000561359 SLC25A38Q96DW6 304 aa3.34□□□□□ -1.87
HERC1-213ENST00000561359 AQP10Q96PS8 301 aa3.34□□□□□ -1.87
HERC1-213ENST00000561359 IMMP2LQ96T52 175 aa3.34□□□□□ -1.87
HERC1-213ENST00000561359 TMEM147Q9BVK8 224 aa3.34□□□□□ -1.87
HERC1-213ENST00000561359 DAZ3Q9NR90 486 aaKnown RBP3.34□□□□□ -1.87
HERC1-213ENST00000561359 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.34□□□□□ -1.87
HERC1-213ENST00000561359 MTFP1Q9UDX5 166 aa3.34□□□□□ -1.87
HERC1-213ENST00000561359 A0A0B4J2A0 478 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 A0A0G2JRQ6 117 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 C7orf71A4D174 169 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 K7EPK0 472 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 PRYO14603 147 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 TNFRSF6BO95407 300 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 PFN1P07737 140 aaKnown RBP3.33□□□□□ -1.88
HERC1-213ENST00000561359 CXCL1P09341 107 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 AKAIN1P0CW23 69 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 CT45A10P0DMU9 189 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 PGAM2P15259 253 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 RPL7P18124 248 aaKnown RBP3.33□□□□□ -1.88
HERC1-213ENST00000561359 TAS2R46P59540 309 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 TMEM183BQ1AE95 376 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 PDZD11Q5EBL8 140 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 NMSQ5H8A3 153 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 IBA57Q5T440 356 aaKnown RBP3.33□□□□□ -1.88
HERC1-213ENST00000561359 PRR27Q6MZM9 219 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 S100A16Q96FQ6 103 aaKnown RBP3.33□□□□□ -1.88
HERC1-213ENST00000561359 TRGV9Q99603 122 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 NMES1Q9C002 83 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 WFDC1Q9HC57 220 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 SHPKQ9UHJ6 478 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 TP53TG3Q9ULZ0 132 aa3.33□□□□□ -1.88
HERC1-213ENST00000561359 STRAPQ9Y3F4 350 aaKnown RBP3.33□□□□□ -1.88
HERC1-213ENST00000561359 A0A087WYN8 130 aa3.32□□□□□ -1.88
HERC1-213ENST00000561359 TRAV26-2A0A0B4J265 109 aa3.32□□□□□ -1.88
HERC1-213ENST00000561359 PRAC2D3DTV9 90 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms