RNA–Protein interactions for RNA: ENST00000561040.1

MEIS3-209, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-209ENST00000561040 Q6ZVH6 145 aa12.15□□□□□ -0.46
MEIS3-209ENST00000561040 Q8N8P6 123 aa12.15□□□□□ -0.46
MEIS3-209ENST00000561040 TRGV11A0A075B6L2 103 aa12.14□□□□□ -0.47
MEIS3-209ENST00000561040 H3BMM0 161 aa12.14□□□□□ -0.47
MEIS3-209ENST00000561040 CD300EQ496F6 205 aaPredicted RBP12.14□□□□□ -0.47
MEIS3-209ENST00000561040 SPATA12Q7Z6I5 190 aa12.14□□□□□ -0.47
MEIS3-209ENST00000561040 SYT8Q8NBV8 401 aa12.14□□□□□ -0.47
MEIS3-209ENST00000561040 CLUHP3Q96NS8 147 aa12.14□□□□□ -0.47
MEIS3-209ENST00000561040 ZNF747Q9BV97 191 aa12.14□□□□□ -0.47
MEIS3-209ENST00000561040 MAP6D1Q9H9H5 199 aa12.14□□□□□ -0.47
MEIS3-209ENST00000561040 GAGE10A6NGK3 116 aa12.14□□□□□ -0.47
MEIS3-209ENST00000561040 SMIM17P0DL12 118 aa12.14□□□□□ -0.47
MEIS3-209ENST00000561040 SCGB1A1P11684 91 aa12.14□□□□□ -0.47
MEIS3-209ENST00000561040 CMC4P56277 68 aaPredicted RBP12.14□□□□□ -0.47
MEIS3-209ENST00000561040 C11orf44Q8N8P7 122 aa12.14□□□□□ -0.47
MEIS3-209ENST00000561040 SMR3AQ99954 134 aa12.14□□□□□ -0.47
MEIS3-209ENST00000561040 TRAV12-2A0A075B6T6 113 aa12.13□□□□□ -0.47
MEIS3-209ENST00000561040 IGHV3-16A0A0C4DH30 117 aa12.13□□□□□ -0.47
MEIS3-209ENST00000561040 PROK1P58294 105 aa12.13□□□□□ -0.47
MEIS3-209ENST00000561040 POM121L12Q8N7R1 296 aa12.13□□□□□ -0.47
MEIS3-209ENST00000561040 NRACQ8N912 160 aa12.13□□□□□ -0.47
MEIS3-209ENST00000561040 C9orf85Q96MD7 179 aa12.13□□□□□ -0.47
MEIS3-209ENST00000561040 KNCNA6PVL3 124 aa12.12□□□□□ -0.47
MEIS3-209ENST00000561040 H3BRM9 83 aa12.12□□□□□ -0.47
MEIS3-209ENST00000561040 COX8AP10176 69 aa12.12□□□□□ -0.47
MEIS3-209ENST00000561040 OR5A1Q8NGJ0 315 aa12.12□□□□□ -0.47
MEIS3-209ENST00000561040 C20orf78Q9BR46 151 aa12.12□□□□□ -0.47
MEIS3-209ENST00000561040 A0A096LNJ9 63 aa12.11□□□□□ -0.47
MEIS3-209ENST00000561040 K7EMI3 77 aa12.11□□□□□ -0.47
MEIS3-209ENST00000561040 LINC00173Q6ZV60 143 aa12.11□□□□□ -0.47
MEIS3-209ENST00000561040 C14orf178Q8N769 122 aaPredicted RBP12.11□□□□□ -0.47
MEIS3-209ENST00000561040 ZNF256Q9Y2P7 627 aaPredicted RBP12.11□□□□□ -0.47
MEIS3-209ENST00000561040 FCER1GP30273 86 aa12.11□□□□□ -0.47
MEIS3-209ENST00000561040 AKAP9Q99996 3911 aa12.1□□□□□ -0.47
MEIS3-209ENST00000561040 G3V4G9 280 aa12.1□□□□□ -0.47
MEIS3-209ENST00000561040 LINC01545Q5VT33 79 aa12.1□□□□□ -0.47
MEIS3-209ENST00000561040 Q8N1Y9 231 aa12.1□□□□□ -0.47
MEIS3-209ENST00000561040 ACANP16112 2415 aa12.1□□□□□ -0.47
MEIS3-209ENST00000561040 IGLV2-18A0A075B6J9 118 aa12.09□□□□□ -0.47
MEIS3-209ENST00000561040 SIVA1O15304 175 aa12.09□□□□□ -0.47
MEIS3-209ENST00000561040 GAS8-AS1O95177 125 aa12.09□□□□□ -0.47
MEIS3-209ENST00000561040 GATA1P15976 413 aaPredicted RBP12.09□□□□□ -0.47
MEIS3-209ENST00000561040 UFSP1Q6NVU6 142 aa12.09□□□□□ -0.47
MEIS3-209ENST00000561040 TRAV26-2A0A0B4J265 109 aa12.09□□□□□ -0.47
MEIS3-209ENST00000561040 C9orf118A6NHY6 69 aa12.09□□□□□ -0.47
MEIS3-209ENST00000561040 MGPP08493 103 aa12.09□□□□□ -0.47
MEIS3-209ENST00000561040 TMEM97Q5BJF2 176 aa12.09□□□□□ -0.47
MEIS3-209ENST00000561040 NDUFA11Q86Y39 141 aa12.09□□□□□ -0.47
MEIS3-209ENST00000561040 LINC00467Q9BRT7 94 aa12.09□□□□□ -0.47
MEIS3-209ENST00000561040 KIF25-AS1Q9Y6Z4 181 aa12.09□□□□□ -0.47
MEIS3-209ENST00000561040 FLNBO75369 2602 aaKnown RBP12.08□□□□□ -0.48
MEIS3-209ENST00000561040 AGRNO00468 2067 aa12.08□□□□□ -0.48
MEIS3-209ENST00000561040 LAGE3Q14657 143 aa12.08□□□□□ -0.48
MEIS3-209ENST00000561040 SMIM2Q9BVW6 85 aa12.08□□□□□ -0.48
MEIS3-209ENST00000561040 HIVEP2P31629 2446 aa12.08□□□□□ -0.48
MEIS3-209ENST00000561040 MUC4Q99102 2169 aa12.07□□□□□ -0.48
MEIS3-209ENST00000561040 SUMO2P61956 95 aaKnown RBP12.07□□□□□ -0.48
MEIS3-209ENST00000561040 SVIPQ8NHG7 77 aa12.07□□□□□ -0.48
MEIS3-209ENST00000561040 IFI27L1Q96BM0 104 aa12.07□□□□□ -0.48
MEIS3-209ENST00000561040 ANK3Q12955 4377 aaKnown RBP12.07□□□□□ -0.48
MEIS3-209ENST00000561040 hDV102S1A0JD36 115 aa12.07□□□□□ -0.48
MEIS3-209ENST00000561040 OR11H12B2RN74 326 aa12.07□□□□□ -0.48
MEIS3-209ENST00000561040 K7EP34 96 aa12.07□□□□□ -0.48
MEIS3-209ENST00000561040 INSP01308 110 aa12.07□□□□□ -0.48
MEIS3-209ENST00000561040 LGALS9BQ3B8N2 356 aa12.07□□□□□ -0.48
MEIS3-209ENST00000561040 LGALS9CQ6DKI2 356 aa12.07□□□□□ -0.48
MEIS3-209ENST00000561040 HIST2H2BDQ6DRA6 164 aa12.07□□□□□ -0.48
MEIS3-209ENST00000561040 RASL10AQ92737 203 aa12.07□□□□□ -0.48
MEIS3-209ENST00000561040 MDFICQ9P1T7 246 aa12.07□□□□□ -0.48
MEIS3-209ENST00000561040 SETXQ7Z333 2677 aaKnown RBP12.06□□□□□ -0.48
MEIS3-209ENST00000561040 TRAV8-6A0A0B4J262 113 aa12.06□□□□□ -0.48
MEIS3-209ENST00000561040 RBMY1BA6NDE4 496 aaKnown RBP12.06□□□□□ -0.48
MEIS3-209ENST00000561040 RBMY1EA6NEQ0 496 aaKnown RBP12.06□□□□□ -0.48
MEIS3-209ENST00000561040 ADARB2-AS1A8MUL3 147 aa12.06□□□□□ -0.48
MEIS3-209ENST00000561040 RBMY1DP0C7P1 496 aaKnown RBP12.06□□□□□ -0.48
MEIS3-209ENST00000561040 RPL32P62910 135 aaKnown RBP12.06□□□□□ -0.48
MEIS3-209ENST00000561040 ORMDL2Q53FV1 153 aa12.06□□□□□ -0.48
MEIS3-209ENST00000561040 PIK3CD-AS1Q5SR53 167 aa12.06□□□□□ -0.48
MEIS3-209ENST00000561040 FAM110AQ9BQ89 295 aa12.06□□□□□ -0.48
MEIS3-209ENST00000561040 SPRY2O43597 315 aa12.05□□□□□ -0.48
MEIS3-209ENST00000561040 SAP30O75446 220 aa12.05□□□□□ -0.48
MEIS3-209ENST00000561040 ATP5LO75964 103 aa12.05□□□□□ -0.48
MEIS3-209ENST00000561040 LINC00315P59091 139 aa12.05□□□□□ -0.48
MEIS3-209ENST00000561040 HSD52Q0P140 79 aa12.05□□□□□ -0.48
MEIS3-209ENST00000561040 ODF3L2Q3SX64 289 aa12.05□□□□□ -0.48
MEIS3-209ENST00000561040 STHQ8IWL8 128 aa12.05□□□□□ -0.48
MEIS3-209ENST00000561040 FXYD7P58549 80 aa12.04□□□□□ -0.48
MEIS3-209ENST00000561040 NEGR1Q7Z3B1 354 aa12.04□□□□□ -0.48
MEIS3-209ENST00000561040 PTH2Q96A98 100 aa12.04□□□□□ -0.48
MEIS3-209ENST00000561040 INAFM1C9JVW0 142 aa12.04□□□□□ -0.48
MEIS3-209ENST00000561040 H0Y8G0 127 aa12.04□□□□□ -0.48
MEIS3-209ENST00000561040 IGLV1-51P01701 117 aa12.04□□□□□ -0.48
MEIS3-209ENST00000561040 ZNF415Q09FC8 603 aa12.04□□□□□ -0.48
MEIS3-209ENST00000561040 NSUN5P1Q3KNT7 163 aa12.04□□□□□ -0.48
MEIS3-209ENST00000561040 TMEM158Q8WZ71 300 aa12.03□□□□□ -0.48
MEIS3-209ENST00000561040 LINC01549A6NIU2 74 aa12.02□□□□□ -0.48
MEIS3-209ENST00000561040 RBMY1A1P0DJD3 496 aaKnown RBP12.02□□□□□ -0.48
MEIS3-209ENST00000561040 RBMY1CP0DJD4 496 aa12.02□□□□□ -0.48
MEIS3-209ENST00000561040 RBMY1FQ15415 496 aaKnown RBP12.02□□□□□ -0.48
MEIS3-209ENST00000561040 HECTD1Q9ULT8 2610 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms