RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 FAM229AH3BQW9 127 aa10.76□□□□□ -0.69
SNX1-213ENST00000561026 FHITP49789 147 aa10.76□□□□□ -0.69
SNX1-213ENST00000561026 UBE2G1P62253 170 aa10.76□□□□□ -0.69
SNX1-213ENST00000561026 WFDC2Q14508 124 aa10.76□□□□□ -0.69
SNX1-213ENST00000561026 ZNF674Q2M3X9 581 aa10.76□□□□□ -0.69
SNX1-213ENST00000561026 SFRP2Q96HF1 295 aa10.76□□□□□ -0.69
SNX1-213ENST00000561026 LTAP01374 205 aa10.75□□□□□ -0.69
SNX1-213ENST00000561026 C1QBP02746 253 aa10.75□□□□□ -0.69
SNX1-213ENST00000561026 LINC01559Q495D7 138 aa10.75□□□□□ -0.69
SNX1-213ENST00000561026 TOR2AQ5JU69 321 aa10.75□□□□□ -0.69
SNX1-213ENST00000561026 FAM74A4Q5TZK3 123 aa10.75□□□□□ -0.69
SNX1-213ENST00000561026 CST9LP1Q5W188 147 aa10.75□□□□□ -0.69
SNX1-213ENST00000561026 STOML3Q8TAV4 291 aa10.75□□□□□ -0.69
SNX1-213ENST00000561026 FAM30AQ9NZY2 134 aa10.75□□□□□ -0.69
SNX1-213ENST00000561026 PHLDA3Q9Y5J5 127 aa10.75□□□□□ -0.69
SNX1-213ENST00000561026 FLG2Q5D862 2391 aaPredicted RBP10.74□□□□□ -0.69
SNX1-213ENST00000561026 A0A087WWL8 130 aa10.74□□□□□ -0.69
SNX1-213ENST00000561026 TPT1P13693 172 aaKnown RBP10.74□□□□□ -0.69
SNX1-213ENST00000561026 MYCBP2O75592 4640 aa10.74□□□□□ -0.69
SNX1-213ENST00000561026 TMSB15BA0A087X1C1 80 aa10.73□□□□□ -0.69
SNX1-213ENST00000561026 M0R381 172 aa10.73□□□□□ -0.69
SNX1-213ENST00000561026 RGS21Q2M5E4 152 aa10.73□□□□□ -0.69
SNX1-213ENST00000561026 NIT1Q86X76 327 aa10.73□□□□□ -0.69
SNX1-213ENST00000561026 VPS13BQ7Z7G8 4022 aa10.73□□□□□ -0.69
SNX1-213ENST00000561026 LECT2O14960 151 aa10.72□□□□□ -0.69
SNX1-213ENST00000561026 ZFP82Q8N141 532 aa10.72□□□□□ -0.69
SNX1-213ENST00000561026 COX11Q9Y6N1 276 aa10.72□□□□□ -0.69
SNX1-213ENST00000561026 URGCP-MRPS24S4R325 110 aa10.72□□□□□ -0.69
SNX1-213ENST00000561026 TRBV10-1A0A0K0K1A3 114 aa10.71□□□□□ -0.69
SNX1-213ENST00000561026 PAGE4O60829 102 aa10.71□□□□□ -0.69
SNX1-213ENST00000561026 AKR1C3P42330 323 aa10.71□□□□□ -0.69
SNX1-213ENST00000561026 SMLR1H3BR10 107 aa10.7□□□□□ -0.7
SNX1-213ENST00000561026 SEC11BP0C7V7 166 aa10.7□□□□□ -0.7
SNX1-213ENST00000561026 KCNRGQ8N5I3 272 aa10.7□□□□□ -0.7
SNX1-213ENST00000561026 SFT2D1Q8WV19 159 aa10.7□□□□□ -0.7
SNX1-213ENST00000561026 BAALCQ8WXS3 180 aa10.7□□□□□ -0.7
SNX1-213ENST00000561026 RPL36AP83881 106 aaKnown RBP10.69□□□□□ -0.7
SNX1-213ENST00000561026 ZNF345Q14585 488 aa10.69□□□□□ -0.7
SNX1-213ENST00000561026 Q6ZSA8 131 aa10.69□□□□□ -0.7
SNX1-213ENST00000561026 MBD3L1Q8WWY6 194 aa10.69□□□□□ -0.7
SNX1-213ENST00000561026 RPL36ALQ969Q0 106 aaKnown RBP10.69□□□□□ -0.7
SNX1-213ENST00000561026 RMI2Q96E14 147 aa10.69□□□□□ -0.7
SNX1-213ENST00000561026 DNAJC30Q96LL9 226 aa10.69□□□□□ -0.7
SNX1-213ENST00000561026 KLK12Q9UKR0 248 aa10.69□□□□□ -0.7
SNX1-213ENST00000561026 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.68□□□□□ -0.7
SNX1-213ENST00000561026 TRBV7-3A0A075B6L6 115 aa10.68□□□□□ -0.7
SNX1-213ENST00000561026 UMAD1C9J7I0 102 aa10.68□□□□□ -0.7
SNX1-213ENST00000561026 S100A9P06702 114 aaKnown RBP10.68□□□□□ -0.7
SNX1-213ENST00000561026 UBE2D3P61077 147 aa10.68□□□□□ -0.7
SNX1-213ENST00000561026 UBE2D2P62837 147 aa10.68□□□□□ -0.7
SNX1-213ENST00000561026 FAM213BQ8TBF2 198 aa10.68□□□□□ -0.7
SNX1-213ENST00000561026 CHCHD7Q9BUK0 85 aa10.68□□□□□ -0.7
SNX1-213ENST00000561026 A0A087WX48 190 aa10.67□□□□□ -0.7
SNX1-213ENST00000561026 MLST8Q9BVC4 326 aa10.67□□□□□ -0.7
SNX1-213ENST00000561026 IGKV2D-24A0A075B6R9 120 aa10.66□□□□□ -0.7
SNX1-213ENST00000561026 SCO2A0A1W2PP80 73 aa10.66□□□□□ -0.7
SNX1-213ENST00000561026 RAB4BP61018 213 aa10.66□□□□□ -0.7
SNX1-213ENST00000561026 RPL19P84098 196 aaKnown RBP10.66□□□□□ -0.7
SNX1-213ENST00000561026 ELOBQ15370 118 aa10.66□□□□□ -0.7
SNX1-213ENST00000561026 BAGE2Q86Y30 109 aa10.66□□□□□ -0.7
SNX1-213ENST00000561026 Q8N976 141 aa10.66□□□□□ -0.7
SNX1-213ENST00000561026 OR10G8Q8NGN5 311 aa10.66□□□□□ -0.7
SNX1-213ENST00000561026 OR10AG1Q8NH19 301 aa10.66□□□□□ -0.7
SNX1-213ENST00000561026 UBE2WQ96B02 151 aa10.66□□□□□ -0.7
SNX1-213ENST00000561026 DNAH8Q96JB1 4490 aa10.66□□□□□ -0.7
SNX1-213ENST00000561026 A0A1B0GV50 99 aa10.65□□□□□ -0.7
SNX1-213ENST00000561026 CXCL1P09341 107 aa10.65□□□□□ -0.7
SNX1-213ENST00000561026 KCNIP4Q6PIL6 250 aa10.65□□□□□ -0.7
SNX1-213ENST00000561026 HMSDA8MTL9 139 aa10.65□□□□□ -0.71
SNX1-213ENST00000561026 PFDN1O60925 122 aa10.65□□□□□ -0.71
SNX1-213ENST00000561026 LINC01620Q4KN68 170 aa10.65□□□□□ -0.71
SNX1-213ENST00000561026 PRR27Q6MZM9 219 aa10.65□□□□□ -0.71
SNX1-213ENST00000561026 ATRAIDQ6UW56 229 aa10.65□□□□□ -0.71
SNX1-213ENST00000561026 SSBP4Q9BWG4 385 aaPredicted RBP10.65□□□□□ -0.71
SNX1-213ENST00000561026 ZNF471Q9BX82 626 aaPredicted RBP10.65□□□□□ -0.71
SNX1-213ENST00000561026 TRBV6-8A0A0A6YYG3 113 aa10.64□□□□□ -0.71
SNX1-213ENST00000561026 A0A0D9SG52 128 aa10.64□□□□□ -0.71
SNX1-213ENST00000561026 RBFOX3A6NFN3 312 aa10.64□□□□□ -0.71
SNX1-213ENST00000561026 SNAI2O43623 268 aa10.64□□□□□ -0.71
SNX1-213ENST00000561026 Q0VG73 95 aa10.64□□□□□ -0.71
SNX1-213ENST00000561026 ZNF56Q15929 161 aa10.64□□□□□ -0.71
SNX1-213ENST00000561026 TMUB2Q71RG4 321 aa10.64□□□□□ -0.71
SNX1-213ENST00000561026 NEXN-AS1Q8NBZ9 246 aa10.64□□□□□ -0.71
SNX1-213ENST00000561026 KANTRA0A1W2PQU2 76 aa10.63□□□□□ -0.71
SNX1-213ENST00000561026 TMEM262E9PQX1 116 aa10.63□□□□□ -0.71
SNX1-213ENST00000561026 BCL2L11O43521 198 aa10.63□□□□□ -0.71
SNX1-213ENST00000561026 PLA2G1BP04054 148 aaKnown RBP10.63□□□□□ -0.71
SNX1-213ENST00000561026 H2AFB1P0C5Y9 115 aa10.63□□□□□ -0.71
SNX1-213ENST00000561026 OR5AL1P0C617 328 aa10.63□□□□□ -0.71
SNX1-213ENST00000561026 MUC21A0A0G2JKD1 596 aa10.62□□□□□ -0.71
SNX1-213ENST00000561026 MUC21A0A140T8X8 626 aa10.62□□□□□ -0.71
SNX1-213ENST00000561026 SPANXN1Q5VSR9 72 aa10.62□□□□□ -0.71
SNX1-213ENST00000561026 LINC00528Q8N1L1 170 aa10.62□□□□□ -0.71
SNX1-213ENST00000561026 EIF5AP63241 154 aaKnown RBP10.61□□□□□ -0.71
SNX1-213ENST00000561026 ENHOQ6UWT2 76 aa10.61□□□□□ -0.71
SNX1-213ENST00000561026 F5H697 171 aa10.6□□□□□ -0.71
SNX1-213ENST00000561026 RPL35P42766 123 aaKnown RBP10.6□□□□□ -0.71
SNX1-213ENST00000561026 SCXQ7RTU7 201 aa10.6□□□□□ -0.71
SNX1-213ENST00000561026 C15orf54Q8N8G6 183 aa10.6□□□□□ -0.71
SNX1-213ENST00000561026 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms