RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 HBDP02042 147 aa9.4□□□□□ -0.91
SNX1-211ENST00000560829 CRYGDP07320 174 aa9.4□□□□□ -0.91
SNX1-211ENST00000560829 GIG44P09565 113 aaPredicted RBP9.4□□□□□ -0.91
SNX1-211ENST00000560829 LINC00173Q6ZV60 143 aa9.4□□□□□ -0.91
SNX1-211ENST00000560829 ZNF747Q9BV97 191 aa9.4□□□□□ -0.91
SNX1-211ENST00000560829 NIPBLQ6KC79 2804 aaeCLIP9.39□□□□□ -0.91
SNX1-211ENST00000560829 CYSRT1A8MQ03 144 aa9.39□□□□□ -0.91
SNX1-211ENST00000560829 M0R2P5 195 aa9.39□□□□□ -0.91
SNX1-211ENST00000560829 SUMO2P61956 95 aaKnown RBP9.39□□□□□ -0.91
SNX1-211ENST00000560829 MORN3Q6PF18 240 aaPredicted RBP9.39□□□□□ -0.91
SNX1-211ENST00000560829 ZNF664Q8N3J9 261 aa9.39□□□□□ -0.91
SNX1-211ENST00000560829 WFDC9Q8NEX5 89 aa9.39□□□□□ -0.91
SNX1-211ENST00000560829 SPATA3Q8NHX4 192 aa9.39□□□□□ -0.91
SNX1-211ENST00000560829 SPXQ9BT56 116 aa9.39□□□□□ -0.91
SNX1-211ENST00000560829 SMIM2Q9BVW6 85 aa9.39□□□□□ -0.91
SNX1-211ENST00000560829 WFDC10AQ9H1F0 79 aa9.39□□□□□ -0.91
SNX1-211ENST00000560829 A0A087WWL8 130 aa9.38□□□□□ -0.91
SNX1-211ENST00000560829 SYS1-DBNDD2H3BUS1 97 aa9.38□□□□□ -0.91
SNX1-211ENST00000560829 HTN1P15515 57 aa9.38□□□□□ -0.91
SNX1-211ENST00000560829 PKIAP61925 76 aa9.38□□□□□ -0.91
SNX1-211ENST00000560829 RPL32P62910 135 aaKnown RBP9.38□□□□□ -0.91
SNX1-211ENST00000560829 SUMO4Q6EEV6 95 aa9.38□□□□□ -0.91
SNX1-211ENST00000560829 NDUFAF3Q9BU61 184 aa9.38□□□□□ -0.91
SNX1-211ENST00000560829 K7EMI3 77 aa9.38□□□□□ -0.91
SNX1-211ENST00000560829 FCER1GP30273 86 aa9.38□□□□□ -0.91
SNX1-211ENST00000560829 PET117Q6UWS5 81 aa9.38□□□□□ -0.91
SNX1-211ENST00000560829 SPATA12Q7Z6I5 190 aa9.38□□□□□ -0.91
SNX1-211ENST00000560829 IL17DQ8TAD2 202 aa9.38□□□□□ -0.91
SNX1-211ENST00000560829 RPL39LQ96EH5 51 aaKnown RBP9.38□□□□□ -0.91
SNX1-211ENST00000560829 MCRIP2Q9BUT9 160 aaKnown RBP9.38□□□□□ -0.91
SNX1-211ENST00000560829 C1QTNF4Q9BXJ3 329 aa9.38□□□□□ -0.91
SNX1-211ENST00000560829 MAP1LC3CQ9BXW4 147 aa9.38□□□□□ -0.91
SNX1-211ENST00000560829 MUC4Q99102 2169 aa9.37□□□□□ -0.91
SNX1-211ENST00000560829 PRM2P04554 102 aa9.37□□□□□ -0.91
SNX1-211ENST00000560829 TMEM208Q9BTX3 173 aa9.37□□□□□ -0.91
SNX1-211ENST00000560829 EDA2RQ9HAV5 297 aa9.37□□□□□ -0.91
SNX1-211ENST00000560829 TRBV6-5A0A0K0K1A5 114 aa9.36□□□□□ -0.91
SNX1-211ENST00000560829 A8MWV9 139 aa9.36□□□□□ -0.91
SNX1-211ENST00000560829 KRTAP24-1Q3LI83 254 aa9.36□□□□□ -0.91
SNX1-211ENST00000560829 KIR2DL5BA0A0G2JN68 375 aa9.36□□□□□ -0.91
SNX1-211ENST00000560829 KIR2DL5BA0A0G2JPC4 375 aa9.36□□□□□ -0.91
SNX1-211ENST00000560829 TSTD3H0UI37 97 aa9.36□□□□□ -0.91
SNX1-211ENST00000560829 WIPF1O43516 503 aa9.36□□□□□ -0.91
SNX1-211ENST00000560829 LAGE3Q14657 143 aa9.36□□□□□ -0.91
SNX1-211ENST00000560829 UFSP1Q6NVU6 142 aa9.36□□□□□ -0.91
SNX1-211ENST00000560829 GTSCR1Q86UQ5 136 aa9.36□□□□□ -0.91
SNX1-211ENST00000560829 KIR2DL5AQ8N109 375 aa9.36□□□□□ -0.91
SNX1-211ENST00000560829 CSNK1G2-AS1Q8NCQ2 148 aa9.36□□□□□ -0.91
SNX1-211ENST00000560829 RNASE8Q8TDE3 154 aaKnown RBP9.36□□□□□ -0.91
SNX1-211ENST00000560829 C20orf202A1L168 122 aa9.35□□□□□ -0.91
SNX1-211ENST00000560829 M0QY20 66 aa9.35□□□□□ -0.91
SNX1-211ENST00000560829 AZU1P20160 251 aa9.35□□□□□ -0.91
SNX1-211ENST00000560829 FAM74A4Q5TZK3 123 aa9.35□□□□□ -0.91
SNX1-211ENST00000560829 VAMP8Q9BV40 100 aa9.35□□□□□ -0.91
SNX1-211ENST00000560829 GOLT1BQ9Y3E0 138 aa9.35□□□□□ -0.91
SNX1-211ENST00000560829 F5H697 171 aa9.34□□□□□ -0.91
SNX1-211ENST00000560829 RPL35AP18077 110 aaKnown RBP9.34□□□□□ -0.91
SNX1-211ENST00000560829 POLR2KP53803 58 aaKnown RBP9.34□□□□□ -0.91
SNX1-211ENST00000560829 ZNF56Q15929 161 aa9.34□□□□□ -0.91
SNX1-211ENST00000560829 TMEM263Q8WUH6 116 aaKnown RBP9.34□□□□□ -0.91
SNX1-211ENST00000560829 TMEM158Q8WZ71 300 aa9.34□□□□□ -0.91
SNX1-211ENST00000560829 ST20Q9HBF5 79 aa9.34□□□□□ -0.91
SNX1-211ENST00000560829 TENM1Q9UKZ4 2725 aa9.34□□□□□ -0.91
SNX1-211ENST00000560829 BAHCC1Q9P281 2608 aa9.34□□□□□ -0.91
SNX1-211ENST00000560829 TCAPO15273 167 aa9.34□□□□□ -0.91
SNX1-211ENST00000560829 ORMDL2Q53FV1 153 aa9.34□□□□□ -0.91
SNX1-211ENST00000560829 LINC01545Q5VT33 79 aa9.34□□□□□ -0.91
SNX1-211ENST00000560829 ZNF705AQ6ZN79 300 aaPredicted RBP9.34□□□□□ -0.91
SNX1-211ENST00000560829 PRO1933Q9H354 126 aa9.34□□□□□ -0.91
SNX1-211ENST00000560829 IGHV3OR16-12A0A075B7B8 117 aa9.33□□□□□ -0.92
SNX1-211ENST00000560829 IFI27L1Q96BM0 104 aa9.33□□□□□ -0.92
SNX1-211ENST00000560829 CSTL1Q9H114 145 aa9.33□□□□□ -0.92
SNX1-211ENST00000560829 TRBV27A0A0K0K1C4 114 aa9.32□□□□□ -0.92
SNX1-211ENST00000560829 RHODO00212 210 aa9.32□□□□□ -0.92
SNX1-211ENST00000560829 CFAP126Q5VTH2 177 aa9.32□□□□□ -0.92
SNX1-211ENST00000560829 LINC00587B1AMM8 73 aa9.32□□□□□ -0.92
SNX1-211ENST00000560829 H7C1H1 209 aa9.32□□□□□ -0.92
SNX1-211ENST00000560829 VCYO14598 125 aa9.32□□□□□ -0.92
SNX1-211ENST00000560829 RS1O15537 224 aa9.32□□□□□ -0.92
SNX1-211ENST00000560829 PAM16Q9Y3D7 125 aa9.32□□□□□ -0.92
SNX1-211ENST00000560829 TRAV9-2A0A087WT02 112 aa9.31□□□□□ -0.92
SNX1-211ENST00000560829 SDHAF1A6NFY7 115 aa9.31□□□□□ -0.92
SNX1-211ENST00000560829 DAZ2Q13117 558 aaKnown RBP9.31□□□□□ -0.92
SNX1-211ENST00000560829 LGALS9BQ3B8N2 356 aa9.31□□□□□ -0.92
SNX1-211ENST00000560829 LGALS9CQ6DKI2 356 aa9.31□□□□□ -0.92
SNX1-211ENST00000560829 C16orf74Q96GX8 76 aa9.31□□□□□ -0.92
SNX1-211ENST00000560829 MRPL16Q9NX20 251 aaKnown RBP9.31□□□□□ -0.92
SNX1-211ENST00000560829 JMJD1CQ15652 2540 aa9.31□□□□□ -0.92
SNX1-211ENST00000560829 PLAC8L1A1L4L8 177 aa9.3□□□□□ -0.92
SNX1-211ENST00000560829 NUDT3O95989 172 aa9.3□□□□□ -0.92
SNX1-211ENST00000560829 IGLL1P15814 213 aa9.3□□□□□ -0.92
SNX1-211ENST00000560829 DDTP30046 118 aa9.3□□□□□ -0.92
SNX1-211ENST00000560829 ZFP2Q6ZN57 461 aa9.3□□□□□ -0.92
SNX1-211ENST00000560829 VWFP04275 2813 aa9.3□□□□□ -0.92
SNX1-211ENST00000560829 ATP5LO75964 103 aa9.3□□□□□ -0.92
SNX1-211ENST00000560829 PRIMA1Q86XR5 153 aa9.3□□□□□ -0.92
SNX1-211ENST00000560829 ATOH7Q8N100 152 aa9.3□□□□□ -0.92
SNX1-211ENST00000560829 TOMM6Q96B49 74 aa9.3□□□□□ -0.92
SNX1-211ENST00000560829 TEP1Q99973 2627 aaKnown RBP9.29□□□□□ -0.92
SNX1-211ENST00000560829 TRRAPQ9Y4A5 3859 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms