RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 RIGQ13278 110 aa10.14□□□□□ -0.79
SMAD6-204ENST00000559931 ZFAND6Q6FIF0 208 aa10.14□□□□□ -0.79
SMAD6-204ENST00000559931 SMIM15Q7Z3B0 74 aa10.14□□□□□ -0.79
SMAD6-204ENST00000559931 POM121L12Q8N7R1 296 aa10.14□□□□□ -0.79
SMAD6-204ENST00000559931 C18orf15Q96N68 181 aa10.14□□□□□ -0.79
SMAD6-204ENST00000559931 IGHV4-4A0A075B6R2 117 aa10.13□□□□□ -0.79
SMAD6-204ENST00000559931 NXPH4O95158 308 aa10.13□□□□□ -0.79
SMAD6-204ENST00000559931 TRGC1P0CF51 173 aa10.13□□□□□ -0.79
SMAD6-204ENST00000559931 FAM3BP58499 235 aaPredicted RBP10.13□□□□□ -0.79
SMAD6-204ENST00000559931 C14orf178Q8N769 122 aaPredicted RBP10.13□□□□□ -0.79
SMAD6-204ENST00000559931 AP1S3Q96PC3 154 aa10.13□□□□□ -0.79
SMAD6-204ENST00000559931 SAMD10Q9BYL1 202 aa10.13□□□□□ -0.79
SMAD6-204ENST00000559931 F5H697 171 aa10.12□□□□□ -0.79
SMAD6-204ENST00000559931 CIDEAO60543 219 aa10.12□□□□□ -0.79
SMAD6-204ENST00000559931 HOXA5P20719 270 aa10.12□□□□□ -0.79
SMAD6-204ENST00000559931 S100PP25815 95 aa10.12□□□□□ -0.79
SMAD6-204ENST00000559931 TMEM88Q6PEY1 159 aa10.12□□□□□ -0.79
SMAD6-204ENST00000559931 KCNIP4Q6PIL6 250 aa10.12□□□□□ -0.79
SMAD6-204ENST00000559931 CEMP1Q6PRD7 247 aaPredicted RBP10.12□□□□□ -0.79
SMAD6-204ENST00000559931 CBLN2Q8IUK8 224 aa10.12□□□□□ -0.79
SMAD6-204ENST00000559931 HHLA3Q9XRX5 114 aa10.12□□□□□ -0.79
SMAD6-204ENST00000559931 A0A087WWC5 75 aa10.11□□□□□ -0.79
SMAD6-204ENST00000559931 NUPR2A6NF83 97 aa10.11□□□□□ -0.79
SMAD6-204ENST00000559931 IGLL5B9A064 214 aa10.11□□□□□ -0.79
SMAD6-204ENST00000559931 RHODO00212 210 aa10.11□□□□□ -0.79
SMAD6-204ENST00000559931 SLAQ13239 276 aa10.11□□□□□ -0.79
SMAD6-204ENST00000559931 FHL2Q14192 279 aa10.11□□□□□ -0.79
SMAD6-204ENST00000559931 IMMP2LQ96T52 175 aa10.11□□□□□ -0.79
SMAD6-204ENST00000559931 CNFNQ9BYD5 112 aa10.11□□□□□ -0.79
SMAD6-204ENST00000559931 KLK5Q9Y337 293 aaPredicted RBP10.11□□□□□ -0.79
SMAD6-204ENST00000559931 A0A0J9YY99 117 aa10.1□□□□□ -0.79
SMAD6-204ENST00000559931 CRYGDP07320 174 aa10.1□□□□□ -0.79
SMAD6-204ENST00000559931 MGPP08493 103 aa10.1□□□□□ -0.79
SMAD6-204ENST00000559931 EVI2AP22794 236 aa10.1□□□□□ -0.79
SMAD6-204ENST00000559931 CAMPP49913 170 aa10.1□□□□□ -0.79
SMAD6-204ENST00000559931 ZNF56Q15929 161 aa10.1□□□□□ -0.79
SMAD6-204ENST00000559931 MRPL54Q6P161 138 aaKnown RBP10.1□□□□□ -0.79
SMAD6-204ENST00000559931 ZFP2Q6ZN57 461 aa10.1□□□□□ -0.79
SMAD6-204ENST00000559931 TMEM242Q9NWH2 141 aa10.1□□□□□ -0.79
SMAD6-204ENST00000559931 URGCP-MRPS24S4R325 110 aa10.1□□□□□ -0.79
SMAD6-204ENST00000559931 TRAV26-1A0A087WT03 109 aa10.09□□□□□ -0.79
SMAD6-204ENST00000559931 PAX4O43316 350 aa10.09□□□□□ -0.79
SMAD6-204ENST00000559931 DPH3P1Q9H4G8 78 aa10.09□□□□□ -0.79
SMAD6-204ENST00000559931 PRO0255Q9UI72 69 aa10.09□□□□□ -0.79
SMAD6-204ENST00000559931 A0A1B0GW15 77 aa10.08□□□□□ -0.8
SMAD6-204ENST00000559931 C3orf84H3BNL1 204 aa10.08□□□□□ -0.8
SMAD6-204ENST00000559931 S100A8P05109 93 aa10.08□□□□□ -0.8
SMAD6-204ENST00000559931 BTF3L4Q96K17 158 aa10.08□□□□□ -0.8
SMAD6-204ENST00000559931 GATA1P15976 413 aaPredicted RBP10.07□□□□□ -0.8
SMAD6-204ENST00000559931 CRYBA4P53673 196 aa10.07□□□□□ -0.8
SMAD6-204ENST00000559931 RAB4BP61018 213 aa10.07□□□□□ -0.8
SMAD6-204ENST00000559931 HBBP68871 147 aa10.07□□□□□ -0.8
SMAD6-204ENST00000559931 UFSP1Q6NVU6 142 aa10.07□□□□□ -0.8
SMAD6-204ENST00000559931 FAM210BQ96KR6 192 aa10.07□□□□□ -0.8
SMAD6-204ENST00000559931 PRADC1Q9BSG0 188 aa10.07□□□□□ -0.8
SMAD6-204ENST00000559931 NUDT3O95989 172 aa10.06□□□□□ -0.8
SMAD6-204ENST00000559931 Q6ZSN1 163 aa10.06□□□□□ -0.8
SMAD6-204ENST00000559931 ATP5L2Q7Z4Y8 100 aa10.06□□□□□ -0.8
SMAD6-204ENST00000559931 SLC25A29Q8N8R3 303 aa10.06□□□□□ -0.8
SMAD6-204ENST00000559931 KIF25-AS1Q9Y6Z4 181 aa10.06□□□□□ -0.8
SMAD6-204ENST00000559931 STARD9Q9P2P6 4700 aa10.06□□□□□ -0.8
SMAD6-204ENST00000559931 TRAV9-1A0A075B6T8 112 aa10.05□□□□□ -0.8
SMAD6-204ENST00000559931 TRBV6-4A0A1B0GX49 114 aa10.05□□□□□ -0.8
SMAD6-204ENST00000559931 COLCA2A8K830 154 aa10.05□□□□□ -0.8
SMAD6-204ENST00000559931 GYPEP15421 78 aa10.05□□□□□ -0.8
SMAD6-204ENST00000559931 RAB5BP61020 215 aa10.05□□□□□ -0.8
SMAD6-204ENST00000559931 TMEM191AQ9H0A3 160 aa10.05□□□□□ -0.8
SMAD6-204ENST00000559931 CSMD3Q7Z407 3707 aa10.05□□□□□ -0.8
SMAD6-204ENST00000559931 C1orf196B1AJZ1 125 aa10.04□□□□□ -0.8
SMAD6-204ENST00000559931 K7EQD1 137 aa10.04□□□□□ -0.8
SMAD6-204ENST00000559931 LINC00315P59091 139 aa10.04□□□□□ -0.8
SMAD6-204ENST00000559931 RHOHQ15669 191 aa10.04□□□□□ -0.8
SMAD6-204ENST00000559931 CASC10Q5T4H9 136 aa10.04□□□□□ -0.8
SMAD6-204ENST00000559931 VSIG2Q96IQ7 327 aa10.04□□□□□ -0.8
SMAD6-204ENST00000559931 TENM2Q9NT68 2774 aa10.03□□□□□ -0.8
SMAD6-204ENST00000559931 A0A1B0GXF2 115 aa10.03□□□□□ -0.8
SMAD6-204ENST00000559931 H3BNG1 76 aa10.03□□□□□ -0.8
SMAD6-204ENST00000559931 H7C1H1 209 aa10.03□□□□□ -0.8
SMAD6-204ENST00000559931 AMN1Q8IY45 258 aa10.03□□□□□ -0.8
SMAD6-204ENST00000559931 C15orf53Q8NAA6 179 aa10.03□□□□□ -0.8
SMAD6-204ENST00000559931 ICOSQ9Y6W8 199 aa10.03□□□□□ -0.8
SMAD6-204ENST00000559931 DYNC2H1Q8NCM8 4307 aaKnown RBP10.02□□□□□ -0.8
SMAD6-204ENST00000559931 LOC100131303A0A0U1RQF7 123 aa10.02□□□□□ -0.81
SMAD6-204ENST00000559931 P0DMU3 169 aa10.02□□□□□ -0.81
SMAD6-204ENST00000559931 FAM231AP0DMU4 169 aa10.02□□□□□ -0.81
SMAD6-204ENST00000559931 FAM231CP0DMU5 169 aa10.02□□□□□ -0.81
SMAD6-204ENST00000559931 MRPL23Q16540 153 aaKnown RBP10.02□□□□□ -0.81
SMAD6-204ENST00000559931 SUMO4Q6EEV6 95 aa10.02□□□□□ -0.81
SMAD6-204ENST00000559931 TRAV26-2A0A0B4J265 109 aa10.01□□□□□ -0.81
SMAD6-204ENST00000559931 GAGE12JA6NER3 117 aa10.01□□□□□ -0.81
SMAD6-204ENST00000559931 RAB4AP20338 218 aa10.01□□□□□ -0.81
SMAD6-204ENST00000559931 RAB5AP20339 215 aa10.01□□□□□ -0.81
SMAD6-204ENST00000559931 SRIP30626 198 aa10.01□□□□□ -0.81
SMAD6-204ENST00000559931 TCTAP57738 103 aa10.01□□□□□ -0.81
SMAD6-204ENST00000559931 GAGE1Q13065 139 aa10.01□□□□□ -0.81
SMAD6-204ENST00000559931 GAGE4Q13068 117 aa10.01□□□□□ -0.81
SMAD6-204ENST00000559931 GAGE5Q13069 117 aa10.01□□□□□ -0.81
SMAD6-204ENST00000559931 GAGE13Q4V321 117 aa10.01□□□□□ -0.81
SMAD6-204ENST00000559931 FAM104BQ5XKR9 115 aa10.01□□□□□ -0.81
SMAD6-204ENST00000559931 RASL11AQ6T310 242 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms