RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 KNCNA6PVL3 124 aa13.12□□□□□ -0.31
SNX1-208ENST00000559844 PPP1R17O96001 155 aa13.12□□□□□ -0.31
SNX1-208ENST00000559844 LBHQ53QV2 105 aaPredicted RBP13.12□□□□□ -0.31
SNX1-208ENST00000559844 MRPL52Q86TS9 123 aaKnown RBP13.12□□□□□ -0.31
SNX1-208ENST00000559844 C9orf85Q96MD7 179 aa13.12□□□□□ -0.31
SNX1-208ENST00000559844 UQCR10Q9UDW1 63 aa13.12□□□□□ -0.31
SNX1-208ENST00000559844 PKD1L1Q8TDX9 2849 aa13.12□□□□□ -0.31
SNX1-208ENST00000559844 IGHV3-16A0A0C4DH30 117 aa13.11□□□□□ -0.31
SNX1-208ENST00000559844 H3BMM0 161 aa13.11□□□□□ -0.31
SNX1-208ENST00000559844 SPRY2O43597 315 aa13.11□□□□□ -0.31
SNX1-208ENST00000559844 SMIM17P0DL12 118 aa13.11□□□□□ -0.31
SNX1-208ENST00000559844 CD300EQ496F6 205 aaPredicted RBP13.11□□□□□ -0.31
SNX1-208ENST00000559844 POM121L12Q8N7R1 296 aa13.11□□□□□ -0.31
SNX1-208ENST00000559844 WFDC9Q8NEX5 89 aa13.11□□□□□ -0.31
SNX1-208ENST00000559844 MAP6D1Q9H9H5 199 aa13.11□□□□□ -0.31
SNX1-208ENST00000559844 TRGV11A0A075B6L2 103 aa13.11□□□□□ -0.31
SNX1-208ENST00000559844 SAP30O75446 220 aa13.11□□□□□ -0.31
SNX1-208ENST00000559844 MGPP08493 103 aa13.11□□□□□ -0.31
SNX1-208ENST00000559844 IGLC3P0DOY3 106 aa13.11□□□□□ -0.31
SNX1-208ENST00000559844 SYT8Q8NBV8 401 aa13.11□□□□□ -0.31
SNX1-208ENST00000559844 C20orf78Q9BR46 151 aa13.11□□□□□ -0.31
SNX1-208ENST00000559844 HSBP1L1C9JCN9 74 aa13.1□□□□□ -0.31
SNX1-208ENST00000559844 H0Y8G0 127 aa13.1□□□□□ -0.31
SNX1-208ENST00000559844 IFI27L1Q96BM0 104 aa13.1□□□□□ -0.31
SNX1-208ENST00000559844 MAJINQ3KP22 176 aa13.09□□□□□ -0.31
SNX1-208ENST00000559844 Q8N1Y9 231 aa13.09□□□□□ -0.31
SNX1-208ENST00000559844 FXYD7P58549 80 aa13.09□□□□□ -0.31
SNX1-208ENST00000559844 LAGE3Q14657 143 aa13.09□□□□□ -0.31
SNX1-208ENST00000559844 LGALS9BQ3B8N2 356 aa13.09□□□□□ -0.31
SNX1-208ENST00000559844 LGALS9CQ6DKI2 356 aa13.09□□□□□ -0.31
SNX1-208ENST00000559844 ST20Q9HBF5 79 aa13.09□□□□□ -0.31
SNX1-208ENST00000559844 IGLL1P15814 213 aa13.08□□□□□ -0.32
SNX1-208ENST00000559844 MCRIP2Q9BUT9 160 aaKnown RBP13.08□□□□□ -0.32
SNX1-208ENST00000559844 SMIM2Q9BVW6 85 aa13.08□□□□□ -0.32
SNX1-208ENST00000559844 KIF25-AS1Q9Y6Z4 181 aa13.08□□□□□ -0.32
SNX1-208ENST00000559844 K7EMI3 77 aa13.07□□□□□ -0.32
SNX1-208ENST00000559844 M0R143 59 aa13.07□□□□□ -0.32
SNX1-208ENST00000559844 RASL10AQ92737 203 aa13.07□□□□□ -0.32
SNX1-208ENST00000559844 ZNF256Q9Y2P7 627 aaPredicted RBP13.07□□□□□ -0.32
SNX1-208ENST00000559844 SUMO2P61956 95 aaKnown RBP13.07□□□□□ -0.32
SNX1-208ENST00000559844 CLUHP3Q96NS8 147 aa13.07□□□□□ -0.32
SNX1-208ENST00000559844 MDFICQ9P1T7 246 aa13.07□□□□□ -0.32
SNX1-208ENST00000559844 C9orf66Q5T8R8 295 aa13.06□□□□□ -0.32
SNX1-208ENST00000559844 DNHD1Q96M86 4753 aa13.05□□□□□ -0.32
SNX1-208ENST00000559844 C2orf88Q9BSF0 95 aa13.05□□□□□ -0.32
SNX1-208ENST00000559844 RBMY1BA6NDE4 496 aaKnown RBP13.05□□□□□ -0.32
SNX1-208ENST00000559844 RBMY1EA6NEQ0 496 aaKnown RBP13.05□□□□□ -0.32
SNX1-208ENST00000559844 CBY3A6NI87 242 aa13.05□□□□□ -0.32
SNX1-208ENST00000559844 RBMY1DP0C7P1 496 aaKnown RBP13.05□□□□□ -0.32
SNX1-208ENST00000559844 LINC00315P59091 139 aa13.05□□□□□ -0.32
SNX1-208ENST00000559844 ORMDL2Q53FV1 153 aa13.05□□□□□ -0.32
SNX1-208ENST00000559844 Q6ZN92 141 aa13.05□□□□□ -0.32
SNX1-208ENST00000559844 hDV102S1A0JD36 115 aa13.04□□□□□ -0.32
SNX1-208ENST00000559844 ATP5LO75964 103 aa13.04□□□□□ -0.32
SNX1-208ENST00000559844 HNRNPA3P51991 378 aaKnown RBP13.04□□□□□ -0.32
SNX1-208ENST00000559844 GOLT1BQ9Y3E0 138 aa13.04□□□□□ -0.32
SNX1-208ENST00000559844 INSL3P51460 131 aa13.03□□□□□ -0.32
SNX1-208ENST00000559844 CMC4P56277 68 aaPredicted RBP13.03□□□□□ -0.32
SNX1-208ENST00000559844 ZNF124Q15973 351 aa13.03□□□□□ -0.32
SNX1-208ENST00000559844 PMCHL2Q9BQD1 86 aa13.03□□□□□ -0.32
SNX1-208ENST00000559844 SNHG12Q9BXW3 62 aa13.03□□□□□ -0.32
SNX1-208ENST00000559844 TCAPO15273 167 aa13.03□□□□□ -0.32
SNX1-208ENST00000559844 IGLV1-51P01701 117 aa13.03□□□□□ -0.32
SNX1-208ENST00000559844 RBMY1A1P0DJD3 496 aaKnown RBP13.03□□□□□ -0.32
SNX1-208ENST00000559844 RBMY1CP0DJD4 496 aa13.03□□□□□ -0.32
SNX1-208ENST00000559844 RPL32P62910 135 aaKnown RBP13.03□□□□□ -0.32
SNX1-208ENST00000559844 RBMY1FQ15415 496 aaKnown RBP13.03□□□□□ -0.32
SNX1-208ENST00000559844 OXLD1Q5BKU9 147 aa13.03□□□□□ -0.32
SNX1-208ENST00000559844 RPL39LQ96EH5 51 aaKnown RBP13.03□□□□□ -0.32
SNX1-208ENST00000559844 SORL1Q92673 2214 aa13.03□□□□□ -0.32
SNX1-208ENST00000559844 CMYA5Q8N3K9 4069 aa13.02□□□□□ -0.32
SNX1-208ENST00000559844 EREGO14944 169 aa13.02□□□□□ -0.32
SNX1-208ENST00000559844 C18orf15Q96N68 181 aa13.02□□□□□ -0.32
SNX1-208ENST00000559844 LINC00467Q9BRT7 94 aa13.02□□□□□ -0.32
SNX1-208ENST00000559844 NUDT3O95989 172 aa13.01□□□□□ -0.33
SNX1-208ENST00000559844 ODF3L2Q3SX64 289 aa13.01□□□□□ -0.33
SNX1-208ENST00000559844 SUMO4Q6EEV6 95 aa13.01□□□□□ -0.33
SNX1-208ENST00000559844 JPT2Q9H910 190 aa13.01□□□□□ -0.33
SNX1-208ENST00000559844 MGAM2Q2M2H8 2515 aa13.01□□□□□ -0.33
SNX1-208ENST00000559844 OR11H12B2RN74 326 aa13.01□□□□□ -0.33
SNX1-208ENST00000559844 F5H697 171 aa13.01□□□□□ -0.33
SNX1-208ENST00000559844 A0A087WWL8 130 aa13□□□□□ -0.33
SNX1-208ENST00000559844 INSP01308 110 aa13□□□□□ -0.33
SNX1-208ENST00000559844 STHQ8IWL8 128 aa13□□□□□ -0.33
SNX1-208ENST00000559844 MUC4Q99102 2169 aa13□□□□□ -0.33
SNX1-208ENST00000559844 PRSS1P07477 247 aa13□□□□□ -0.33
SNX1-208ENST00000559844 ZNF415Q09FC8 603 aa13□□□□□ -0.33
SNX1-208ENST00000559844 ZNF876PQ49A33 203 aa13□□□□□ -0.33
SNX1-208ENST00000559844 MRPS16Q9Y3D3 137 aaKnown RBP13□□□□□ -0.33
SNX1-208ENST00000559844 WIPF1O43516 503 aa12.99□□□□□ -0.33
SNX1-208ENST00000559844 G0S2P27469 103 aa12.99□□□□□ -0.33
SNX1-208ENST00000559844 CSTL1Q9H114 145 aa12.99□□□□□ -0.33
SNX1-208ENST00000559844 G3V4G9 280 aa12.98□□□□□ -0.33
SNX1-208ENST00000559844 CRYGDP07320 174 aa12.98□□□□□ -0.33
SNX1-208ENST00000559844 PIK3CD-AS1Q5SR53 167 aa12.98□□□□□ -0.33
SNX1-208ENST00000559844 FAM74A4Q5TZK3 123 aa12.98□□□□□ -0.33
SNX1-208ENST00000559844 PTH2Q96A98 100 aa12.98□□□□□ -0.33
SNX1-208ENST00000559844 TRBV6-5A0A0K0K1A5 114 aa12.98□□□□□ -0.33
SNX1-208ENST00000559844 ZNF56Q15929 161 aa12.98□□□□□ -0.33
SNX1-208ENST00000559844 SLC25A34Q6PIV7 304 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms