RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 CHCHD7Q9BUK0 85 aa6.03□□□□□ -1.44
HDDC3-204ENST00000559834 CHAC1Q9BUX1 264 aa6.03□□□□□ -1.44
HDDC3-204ENST00000559834 SAMD10Q9BYL1 202 aa6.03□□□□□ -1.44
HDDC3-204ENST00000559834 KLK12Q9UKR0 248 aa6.03□□□□□ -1.44
HDDC3-204ENST00000559834 TNFSF18Q9UNG2 199 aa6.03□□□□□ -1.44
HDDC3-204ENST00000559834 SRRM2Q9UQ35 2752 aaKnown RBP6.03□□□□□ -1.44
HDDC3-204ENST00000559834 B4DEV8 164 aa6.02□□□□□ -1.45
HDDC3-204ENST00000559834 ATP6V0CP27449 155 aa6.02□□□□□ -1.45
HDDC3-204ENST00000559834 Q0VG73 95 aa6.02□□□□□ -1.45
HDDC3-204ENST00000559834 C14orf177Q52M58 125 aa6.02□□□□□ -1.45
HDDC3-204ENST00000559834 DMRTA1Q5VZB9 504 aa6.02□□□□□ -1.45
HDDC3-204ENST00000559834 UFSP1Q6NVU6 142 aa6.02□□□□□ -1.45
HDDC3-204ENST00000559834 TEX261Q6UWH6 196 aa6.02□□□□□ -1.45
HDDC3-204ENST00000559834 C14orf178Q8N769 122 aaPredicted RBP6.02□□□□□ -1.45
HDDC3-204ENST00000559834 UBE2WQ96B02 151 aa6.02□□□□□ -1.45
HDDC3-204ENST00000559834 NKX6-2Q9C056 277 aaPredicted RBP6.02□□□□□ -1.45
HDDC3-204ENST00000559834 JPT2Q9H910 190 aa6.02□□□□□ -1.45
HDDC3-204ENST00000559834 FAT1Q14517 4588 aa6.02□□□□□ -1.45
HDDC3-204ENST00000559834 FXYD6-FXYD2A0A087WZ82 144 aa6.01□□□□□ -1.45
HDDC3-204ENST00000559834 TRAV34A0A0B4J273 112 aa6.01□□□□□ -1.45
HDDC3-204ENST00000559834 TRBV10-1A0A0K0K1A3 114 aa6.01□□□□□ -1.45
HDDC3-204ENST00000559834 ARMS2P0C7Q2 107 aa6.01□□□□□ -1.45
HDDC3-204ENST00000559834 RPL36AP83881 106 aaKnown RBP6.01□□□□□ -1.45
HDDC3-204ENST00000559834 LINC01620Q4KN68 170 aa6.01□□□□□ -1.45
HDDC3-204ENST00000559834 DNLZQ5SXM8 178 aa6.01□□□□□ -1.45
HDDC3-204ENST00000559834 FAM74A4Q5TZK3 123 aa6.01□□□□□ -1.45
HDDC3-204ENST00000559834 RPL36ALQ969Q0 106 aaKnown RBP6.01□□□□□ -1.45
HDDC3-204ENST00000559834 Q9UF83 564 aa6.01□□□□□ -1.45
HDDC3-204ENST00000559834 ZFP30Q9Y2G7 519 aa6.01□□□□□ -1.45
HDDC3-204ENST00000559834 PHLDA3Q9Y5J5 127 aa6.01□□□□□ -1.45
HDDC3-204ENST00000559834 ARL2-SNX15V9GYD0 113 aa6.01□□□□□ -1.45
HDDC3-204ENST00000559834 LINC00862A6NCI5 91 aa6□□□□□ -1.45
HDDC3-204ENST00000559834 TMEM262E9PQX1 116 aa6□□□□□ -1.45
HDDC3-204ENST00000559834 H3BVH4 76 aa6□□□□□ -1.45
HDDC3-204ENST00000559834 ARPC5O15511 151 aa6□□□□□ -1.45
HDDC3-204ENST00000559834 IGLV2-8P01709 118 aa6□□□□□ -1.45
HDDC3-204ENST00000559834 TPT1P13693 172 aaKnown RBP6□□□□□ -1.45
HDDC3-204ENST00000559834 CIRBP-AS1Q8TBR5 109 aa6□□□□□ -1.45
HDDC3-204ENST00000559834 HIST1H2BAQ96A08 127 aa6□□□□□ -1.45
HDDC3-204ENST00000559834 SFRP2Q96HF1 295 aa6□□□□□ -1.45
HDDC3-204ENST00000559834 AQP10Q96PS8 301 aa6□□□□□ -1.45
HDDC3-204ENST00000559834 C1orf43Q9BWL3 253 aa6□□□□□ -1.45
HDDC3-204ENST00000559834 TRBV7-3A0A075B6L6 115 aa5.99□□□□□ -1.45
HDDC3-204ENST00000559834 A0A087WWL8 130 aa5.99□□□□□ -1.45
HDDC3-204ENST00000559834 BORCS7-ASMTA0A0B4J1R7 106 aa5.99□□□□□ -1.45
HDDC3-204ENST00000559834 HMSDA8MTL9 139 aa5.99□□□□□ -1.45
HDDC3-204ENST00000559834 KRBOX1C9JBD0 128 aa5.99□□□□□ -1.45
HDDC3-204ENST00000559834 M0R036 132 aa5.99□□□□□ -1.45
HDDC3-204ENST00000559834 PEX7O00628 323 aa5.99□□□□□ -1.45
HDDC3-204ENST00000559834 CLLU1Q5K131 121 aa5.99□□□□□ -1.45
HDDC3-204ENST00000559834 FAM162BQ5T6X4 162 aa5.99□□□□□ -1.45
HDDC3-204ENST00000559834 ATRAIDQ6UW56 229 aa5.99□□□□□ -1.45
HDDC3-204ENST00000559834 TMUB2Q71RG4 321 aa5.99□□□□□ -1.45
HDDC3-204ENST00000559834 COMMD7Q86VX2 200 aa5.99□□□□□ -1.45
HDDC3-204ENST00000559834 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.99□□□□□ -1.45
HDDC3-204ENST00000559834 INO80EQ8NBZ0 244 aaPredicted RBP5.99□□□□□ -1.45
HDDC3-204ENST00000559834 CTXND1A0A1B0GTU2 59 aa5.98□□□□□ -1.45
HDDC3-204ENST00000559834 GRIFINA4D1Z8 144 aa5.98□□□□□ -1.45
HDDC3-204ENST00000559834 M0R381 172 aa5.98□□□□□ -1.45
HDDC3-204ENST00000559834 CRPP02741 224 aa5.98□□□□□ -1.45
HDDC3-204ENST00000559834 CRIP1P50238 77 aa5.98□□□□□ -1.45
HDDC3-204ENST00000559834 UBE2G2P60604 165 aa5.98□□□□□ -1.45
HDDC3-204ENST00000559834 PKIAP61925 76 aa5.98□□□□□ -1.45
HDDC3-204ENST00000559834 UBE2G1P62253 170 aa5.98□□□□□ -1.45
HDDC3-204ENST00000559834 COX8CQ7Z4L0 72 aa5.98□□□□□ -1.45
HDDC3-204ENST00000559834 Q86TA4 180 aa5.98□□□□□ -1.45
HDDC3-204ENST00000559834 ZFP82Q8N141 532 aa5.98□□□□□ -1.45
HDDC3-204ENST00000559834 TRBV6-8A0A0A6YYG3 113 aa5.97□□□□□ -1.45
HDDC3-204ENST00000559834 SH2D1AO60880 128 aa5.97□□□□□ -1.45
HDDC3-204ENST00000559834 KRTAP10-4P60372 401 aaPredicted RBP5.97□□□□□ -1.45
HDDC3-204ENST00000559834 RAB4BP61018 213 aa5.97□□□□□ -1.45
HDDC3-204ENST00000559834 UBE2D3P61077 147 aa5.97□□□□□ -1.45
HDDC3-204ENST00000559834 UBE2D2P62837 147 aa5.97□□□□□ -1.45
HDDC3-204ENST00000559834 AKR1C8PQ5T2L2 129 aa5.97□□□□□ -1.45
HDDC3-204ENST00000559834 DGAT2L7PQ6IED9 249 aa5.97□□□□□ -1.45
HDDC3-204ENST00000559834 ZC2HC1AQ96GY0 325 aa5.97□□□□□ -1.45
HDDC3-204ENST00000559834 FMC1Q96HJ9 113 aa5.97□□□□□ -1.45
HDDC3-204ENST00000559834 DNAJC30Q96LL9 226 aa5.97□□□□□ -1.45
HDDC3-204ENST00000559834 VPS13BQ7Z7G8 4022 aa5.96□□□□□ -1.45
HDDC3-204ENST00000559834 FAM74A7A6NL05 159 aa5.96□□□□□ -1.46
HDDC3-204ENST00000559834 ANGP03950 147 aaKnown RBP5.96□□□□□ -1.46
HDDC3-204ENST00000559834 RAB14P61106 215 aa5.96□□□□□ -1.46
HDDC3-204ENST00000559834 RPL37AP61513 92 aaKnown RBP5.96□□□□□ -1.46
HDDC3-204ENST00000559834 ZNF674Q2M3X9 581 aa5.96□□□□□ -1.46
HDDC3-204ENST00000559834 LINC01559Q495D7 138 aa5.96□□□□□ -1.46
HDDC3-204ENST00000559834 TMEM97Q5BJF2 176 aa5.96□□□□□ -1.46
HDDC3-204ENST00000559834 RPL7L1Q6DKI1 246 aaKnown RBP5.96□□□□□ -1.46
HDDC3-204ENST00000559834 ENHOQ6UWT2 76 aa5.96□□□□□ -1.46
HDDC3-204ENST00000559834 ALKAL2Q6UX46 152 aa5.96□□□□□ -1.46
HDDC3-204ENST00000559834 C15orf54Q8N8G6 183 aa5.96□□□□□ -1.46
HDDC3-204ENST00000559834 OR10G8Q8NGN5 311 aa5.96□□□□□ -1.46
HDDC3-204ENST00000559834 TCEAL7Q9BRU2 100 aa5.96□□□□□ -1.46
HDDC3-204ENST00000559834 PLA2G2DQ9UNK4 145 aa5.96□□□□□ -1.46
HDDC3-204ENST00000559834 MYCBP2O75592 4640 aa5.95□□□□□ -1.46
HDDC3-204ENST00000559834 TMSB15BA0A087X1C1 80 aa5.95□□□□□ -1.46
HDDC3-204ENST00000559834 TRBV6-1A0A0K0K1D8 114 aa5.95□□□□□ -1.46
HDDC3-204ENST00000559834 BCL2L11O43521 198 aa5.95□□□□□ -1.46
HDDC3-204ENST00000559834 ZNF345Q14585 488 aa5.95□□□□□ -1.46
HDDC3-204ENST00000559834 ZNF726P1Q15940 193 aa5.95□□□□□ -1.46
HDDC3-204ENST00000559834 MIAQ16674 131 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms