RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 CBLN1P23435 193 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 NPC2P61916 151 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 KLKP1Q107X0 134 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 SPINK13Q1W4C9 94 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 C6orf52Q5T4I8 152 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 FAM74A4Q5TZK3 123 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 DEFB132Q7Z7B7 95 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 C4orf33Q8N1A6 199 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 C20orf197Q8N268 126 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 DSCR8Q96T75 97 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 SNRNP25Q9BV90 132 aaKnown RBP0.71□□□□□ -2.3
GABPB1-209ENST00000559100 AGPAT4-IT1Q9H0P7 198 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 RERGLQ9H628 205 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 NAA60Q9H7X0 242 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 ROS1P08922 2347 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 DAPK1P53355 1430 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 MYOM3Q5VTT5 1437 aa0.71□□□□□ -2.3
GABPB1-209ENST00000559100 MIF4GDA9UHW6 222 aaKnown RBP0.7□□□□□ -2.3
GABPB1-209ENST00000559100 LY6G6CO95867 125 aa0.7□□□□□ -2.3
GABPB1-209ENST00000559100 SSBP1Q04837 148 aaKnown RBP0.7□□□□□ -2.3
GABPB1-209ENST00000559100 C10orf99Q6UWK7 81 aa0.7□□□□□ -2.3
GABPB1-209ENST00000559100 GNG8Q9UK08 70 aa0.7□□□□□ -2.3
GABPB1-209ENST00000559100 SERP1Q9Y6X1 66 aa0.7□□□□□ -2.3
GABPB1-209ENST00000559100 BLMP54132 1417 aaPredicted RBP0.7□□□□□ -2.3
GABPB1-209ENST00000559100 MYH6P13533 1939 aa0.7□□□□□ -2.3
GABPB1-209ENST00000559100 RREB1Q92766 1687 aa0.69□□□□□ -2.3
GABPB1-209ENST00000559100 CITO14578 2027 aa0.69□□□□□ -2.3
GABPB1-209ENST00000559100 MCRIP1C9JLW8 97 aa0.69□□□□□ -2.3
GABPB1-209ENST00000559100 DLEU1O43261 78 aa0.69□□□□□ -2.3
GABPB1-209ENST00000559100 SPTBP11277 2137 aa0.69□□□□□ -2.3
GABPB1-209ENST00000559100 FGF7P21781 194 aa0.69□□□□□ -2.3
GABPB1-209ENST00000559100 ZNF137PP52743 207 aa0.69□□□□□ -2.3
GABPB1-209ENST00000559100 ELOF1P60002 83 aaKnown RBP0.69□□□□□ -2.3
GABPB1-209ENST00000559100 RBM3P98179 157 aaKnown RBP0.69□□□□□ -2.3
GABPB1-209ENST00000559100 SPINK9Q5DT21 86 aa0.69□□□□□ -2.3
GABPB1-209ENST00000559100 COX7B2Q8TF08 81 aa0.69□□□□□ -2.3
GABPB1-209ENST00000559100 C10orf82Q8WW14 230 aa0.69□□□□□ -2.3
GABPB1-209ENST00000559100 ADGRB1O14514 1584 aa0.69□□□□□ -2.3
GABPB1-209ENST00000559100 SPAG17Q6Q759 2223 aa0.69□□□□□ -2.3
GABPB1-209ENST00000559100 SPEF2Q9C093 1822 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 KIF13AQ9H1H9 1805 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 PTPRMP28827 1452 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 ZNF518AQ6AHZ1 1483 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 ATG2AQ2TAZ0 1938 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 TRBV10-3A0A0K0K1G6 114 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 LOC100130705A0A1B0GUX0 176 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 F2Z2F3 143 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 F6UZH7 168 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 APOC4-APOC2K7ER74 178 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 APOC2P02655 101 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 CCL3L1P16619 93 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 S100A1P23297 94 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 Q56UQ5 140 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 C12orf73Q69YU5 71 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 CNTRLQ7Z7A1 2325 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 PP6455Q8WZ26 134 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 AQP10Q96PS8 301 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 V9GYV3 84 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 DLEC1Q9Y238 1755 aa0.68□□□□□ -2.3
GABPB1-209ENST00000559100 CFTRP13569 1480 aa0.67□□□□□ -2.3
GABPB1-209ENST00000559100 TRBV7-1A0A0A6YYK4 115 aa0.67□□□□□ -2.3
GABPB1-209ENST00000559100 LINC00587B1AMM8 73 aa0.67□□□□□ -2.3
GABPB1-209ENST00000559100 IFNGP01579 166 aa0.67□□□□□ -2.3
GABPB1-209ENST00000559100 SMIM6P0DI80 62 aa0.67□□□□□ -2.3
GABPB1-209ENST00000559100 TPPP2P59282 170 aa0.67□□□□□ -2.3
GABPB1-209ENST00000559100 MRPS10P82664 201 aaKnown RBP0.67□□□□□ -2.3
GABPB1-209ENST00000559100 CATR1Q13166 79 aa0.67□□□□□ -2.3
GABPB1-209ENST00000559100 MRPL54Q6P161 138 aaKnown RBP0.67□□□□□ -2.3
GABPB1-209ENST00000559100 TMEM203Q969S6 136 aa0.67□□□□□ -2.3
GABPB1-209ENST00000559100 PPP3R2Q96LZ3 170 aa0.67□□□□□ -2.3
GABPB1-209ENST00000559100 C2orf88Q9BSF0 95 aa0.67□□□□□ -2.3
GABPB1-209ENST00000559100 SCN3BQ9NY72 215 aa0.67□□□□□ -2.3
GABPB1-209ENST00000559100 KTN1Q86UP2 1357 aaKnown RBP0.67□□□□□ -2.3
GABPB1-209ENST00000559100 AFDNP55196 1824 aaKnown RBP0.66□□□□□ -2.3
GABPB1-209ENST00000559100 LAMA4Q16363 1823 aa0.66□□□□□ -2.3
GABPB1-209ENST00000559100 SMG6Q86US8 1419 aaKnown RBP0.66□□□□□ -2.3
GABPB1-209ENST00000559100 TRAV13-2A0A0B4J235 113 aa0.66□□□□□ -2.3
GABPB1-209ENST00000559100 SPAARA0A1B0GVQ0 90 aa0.66□□□□□ -2.3
GABPB1-209ENST00000559100 K7EIL1 84 aa0.66□□□□□ -2.3
GABPB1-209ENST00000559100 EDDM3BP56851 147 aa0.66□□□□□ -2.3
GABPB1-209ENST00000559100 BTG2P78543 158 aa0.66□□□□□ -2.3
GABPB1-209ENST00000559100 CCL8P80075 99 aa0.66□□□□□ -2.3
GABPB1-209ENST00000559100 WHAMMP3Q1A5X7 153 aa0.66□□□□□ -2.3
GABPB1-209ENST00000559100 Q6AWC8 147 aa0.66□□□□□ -2.3
GABPB1-209ENST00000559100 ZNF818PQ6ZRF7 136 aa0.66□□□□□ -2.3
GABPB1-209ENST00000559100 LSM10Q969L4 123 aaKnown RBP0.66□□□□□ -2.3
GABPB1-209ENST00000559100 BCORL1Q5H9F3 1711 aa0.66□□□□□ -2.3
GABPB1-209ENST00000559100 MBD5Q9P267 1494 aa0.66□□□□□ -2.3
GABPB1-209ENST00000559100 PLXNA2O75051 1894 aa0.65□□□□□ -2.3
GABPB1-209ENST00000559100 PHLPP1O60346 1717 aa0.65□□□□□ -2.31
GABPB1-209ENST00000559100 HCG22E2RYF7 251 aa0.65□□□□□ -2.31
GABPB1-209ENST00000559100 ACYP2P14621 99 aa0.65□□□□□ -2.31
GABPB1-209ENST00000559100 UBE2D1P51668 147 aa0.65□□□□□ -2.31
GABPB1-209ENST00000559100 RPL37P61927 97 aaKnown RBP0.65□□□□□ -2.31
GABPB1-209ENST00000559100 INSL4Q14641 139 aa0.65□□□□□ -2.31
GABPB1-209ENST00000559100 C10orf128Q5T292 105 aa0.65□□□□□ -2.31
GABPB1-209ENST00000559100 C9orf153Q5TBE3 101 aa0.65□□□□□ -2.31
GABPB1-209ENST00000559100 SVBPQ8N300 66 aa0.65□□□□□ -2.31
GABPB1-209ENST00000559100 LINC00312Q9Y6C7 94 aa0.65□□□□□ -2.31
GABPB1-209ENST00000559100 WDR7Q9Y4E6 1490 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms