RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 SOCS3O14543 225 aa8.11□□□□□ -1.11
CSPG4P5-201ENST00000558731 FAM104BQ5XKR9 115 aa8.11□□□□□ -1.11
CSPG4P5-201ENST00000558731 CHCHD1Q96BP2 118 aaKnown RBP8.11□□□□□ -1.11
CSPG4P5-201ENST00000558731 SMIM17P0DL12 118 aa8.1□□□□□ -1.11
CSPG4P5-201ENST00000558731 SEC11AP67812 179 aa8.1□□□□□ -1.11
CSPG4P5-201ENST00000558731 KLF5Q13887 457 aaPredicted RBP8.1□□□□□ -1.11
CSPG4P5-201ENST00000558731 A0A087WWL8 130 aa8.1□□□□□ -1.11
CSPG4P5-201ENST00000558731 SCRT2Q9NQ03 307 aa8.1□□□□□ -1.11
CSPG4P5-201ENST00000558731 NPYP01303 97 aa8.09□□□□□ -1.11
CSPG4P5-201ENST00000558731 LINC01559Q495D7 138 aa8.09□□□□□ -1.11
CSPG4P5-201ENST00000558731 TMEM86BQ8N661 226 aa8.09□□□□□ -1.11
CSPG4P5-201ENST00000558731 BRI3O95415 125 aa8.09□□□□□ -1.11
CSPG4P5-201ENST00000558731 NSD1Q96L73 2696 aaPredicted RBP8.09□□□□□ -1.11
CSPG4P5-201ENST00000558731 K7EQG2 157 aa8.09□□□□□ -1.11
CSPG4P5-201ENST00000558731 IGHV3-73A0A0B4J1V6 119 aa8.08□□□□□ -1.12
CSPG4P5-201ENST00000558731 CACNG7P62955 275 aa8.08□□□□□ -1.12
CSPG4P5-201ENST00000558731 XCL2Q9UBD3 114 aa8.08□□□□□ -1.12
CSPG4P5-201ENST00000558731 C9orf118A6NHY6 69 aa8.08□□□□□ -1.12
CSPG4P5-201ENST00000558731 J3QR89 54 aa8.08□□□□□ -1.12
CSPG4P5-201ENST00000558731 COX8AP10176 69 aa8.08□□□□□ -1.12
CSPG4P5-201ENST00000558731 ADAMTSL5Q6ZMM2 481 aa8.08□□□□□ -1.12
CSPG4P5-201ENST00000558731 JPT2Q9H910 190 aa8.08□□□□□ -1.12
CSPG4P5-201ENST00000558731 IGLC6P0CF74 106 aa8.08□□□□□ -1.12
CSPG4P5-201ENST00000558731 TSSC4Q9Y5U2 329 aaPredicted RBP8.08□□□□□ -1.12
CSPG4P5-201ENST00000558731 A0A0J9YX75 114 aa8.07□□□□□ -1.12
CSPG4P5-201ENST00000558731 A0A1B0GW15 77 aa8.07□□□□□ -1.12
CSPG4P5-201ENST00000558731 URB1-AS1Q96HZ7 61 aa8.07□□□□□ -1.12
CSPG4P5-201ENST00000558731 MAP1LC3AQ9H492 121 aa8.07□□□□□ -1.12
CSPG4P5-201ENST00000558731 K7EP34 96 aa8.07□□□□□ -1.12
CSPG4P5-201ENST00000558731 RNASE1P07998 156 aaKnown RBP8.07□□□□□ -1.12
CSPG4P5-201ENST00000558731 HILS1P60008 231 aa8.07□□□□□ -1.12
CSPG4P5-201ENST00000558731 SIGMAR1Q99720 223 aa8.07□□□□□ -1.12
CSPG4P5-201ENST00000558731 SIGLEC8Q9NYZ4 499 aa8.07□□□□□ -1.12
CSPG4P5-201ENST00000558731 ZNF580Q9UK33 172 aa8.07□□□□□ -1.12
CSPG4P5-201ENST00000558731 G3V4G9 280 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 RPL35AP18077 110 aaKnown RBP8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 AZU1P20160 251 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 MTURNQ8N3F0 131 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 JMJD8Q96S16 334 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 LINC01587Q99440 93 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 MAST4O15021 2626 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 BAHCC1Q9P281 2608 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 A0A1B0GV72 72 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 LGALS9O00182 355 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 LEPP41159 167 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 SAMD5Q5TGI4 173 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 NEGR1Q7Z3B1 354 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 WFDC10AQ9H1F0 79 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 MDFICQ9P1T7 246 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 SMIM13P0DJ93 91 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 ZNF56Q15929 161 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 STHQ8IWL8 128 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 Q8N2B8 174 aa8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 CHTOPQ9Y3Y2 248 aaKnown RBP8.06□□□□□ -1.12
CSPG4P5-201ENST00000558731 TEX48A0A1B0GUV7 120 aa8.05□□□□□ -1.12
CSPG4P5-201ENST00000558731 H3BRM9 83 aa8.05□□□□□ -1.12
CSPG4P5-201ENST00000558731 DUSP14O95147 198 aaKnown RBP8.05□□□□□ -1.12
CSPG4P5-201ENST00000558731 PRSS1P07477 247 aa8.05□□□□□ -1.12
CSPG4P5-201ENST00000558731 TNFRSF6BO95407 300 aa8.05□□□□□ -1.12
CSPG4P5-201ENST00000558731 DEFB114Q30KQ6 69 aa8.05□□□□□ -1.12
CSPG4P5-201ENST00000558731 MYOZ3Q8TDC0 251 aa8.05□□□□□ -1.12
CSPG4P5-201ENST00000558731 HSD52Q0P140 79 aa8.05□□□□□ -1.12
CSPG4P5-201ENST00000558731 Q8N1Y9 231 aa8.05□□□□□ -1.12
CSPG4P5-201ENST00000558731 NHP2Q9NX24 153 aaKnown RBP8.05□□□□□ -1.12
CSPG4P5-201ENST00000558731 K7EMI3 77 aa8.04□□□□□ -1.12
CSPG4P5-201ENST00000558731 LENEPQ9Y5L5 61 aa8.04□□□□□ -1.12
CSPG4P5-201ENST00000558731 FOXI2Q6ZQN5 318 aa8.04□□□□□ -1.12
CSPG4P5-201ENST00000558731 OR5A1Q8NGJ0 315 aa8.04□□□□□ -1.12
CSPG4P5-201ENST00000558731 OR11H12B2RN74 326 aa8.04□□□□□ -1.12
CSPG4P5-201ENST00000558731 PCP2Q8IVA1 136 aa8.04□□□□□ -1.12
CSPG4P5-201ENST00000558731 RPL39LQ96EH5 51 aaKnown RBP8.04□□□□□ -1.12
CSPG4P5-201ENST00000558731 CLUHP3Q96NS8 147 aa8.04□□□□□ -1.12
CSPG4P5-201ENST00000558731 MAP6D1Q9H9H5 199 aa8.04□□□□□ -1.12
CSPG4P5-201ENST00000558731 A0A1W2PPM0 123 aa8.03□□□□□ -1.12
CSPG4P5-201ENST00000558731 K7ERJ3 54 aa8.03□□□□□ -1.12
CSPG4P5-201ENST00000558731 ZNF747Q9BV97 191 aa8.03□□□□□ -1.12
CSPG4P5-201ENST00000558731 IGHV1OR15-1A0A075B7D0 117 aa8.03□□□□□ -1.12
CSPG4P5-201ENST00000558731 ZNF876PQ49A33 203 aa8.03□□□□□ -1.12
CSPG4P5-201ENST00000558731 C2orf91Q6ZV80 131 aa8.03□□□□□ -1.12
CSPG4P5-201ENST00000558731 EMP1P54849 157 aa8.03□□□□□ -1.12
CSPG4P5-201ENST00000558731 RNF152Q8N8N0 203 aa8.03□□□□□ -1.12
CSPG4P5-201ENST00000558731 ZNF256Q9Y2P7 627 aaPredicted RBP8.03□□□□□ -1.12
CSPG4P5-201ENST00000558731 CRXO43186 299 aaPredicted RBP8.02□□□□□ -1.13
CSPG4P5-201ENST00000558731 LINC01545Q5VT33 79 aa8.02□□□□□ -1.13
CSPG4P5-201ENST00000558731 TTTY13Q9BZ97 58 aa8.02□□□□□ -1.13
CSPG4P5-201ENST00000558731 RNF185Q96GF1 192 aa8.02□□□□□ -1.13
CSPG4P5-201ENST00000558731 NBEAL2Q6ZNJ1 2754 aa8.02□□□□□ -1.13
CSPG4P5-201ENST00000558731 RNASE3P12724 160 aaKnown RBP8.02□□□□□ -1.13
CSPG4P5-201ENST00000558731 COX8CQ7Z4L0 72 aa8.02□□□□□ -1.13
CSPG4P5-201ENST00000558731 ETDBQ3ZM63 59 aa8.01□□□□□ -1.13
CSPG4P5-201ENST00000558731 ZNF493Q6ZR52 646 aa8.01□□□□□ -1.13
CSPG4P5-201ENST00000558731 DPH3P1Q9H4G8 78 aa8.01□□□□□ -1.13
CSPG4P5-201ENST00000558731 PRSS47A8MTI9 375 aa8.01□□□□□ -1.13
CSPG4P5-201ENST00000558731 H3BMM0 161 aa8.01□□□□□ -1.13
CSPG4P5-201ENST00000558731 CKS1BP61024 79 aa8.01□□□□□ -1.13
CSPG4P5-201ENST00000558731 IFI27L1Q96BM0 104 aa8.01□□□□□ -1.13
CSPG4P5-201ENST00000558731 SPAG8Q99932 426 aaPredicted RBP8.01□□□□□ -1.13
CSPG4P5-201ENST00000558731 KLLNB2CW77 178 aa8□□□□□ -1.13
CSPG4P5-201ENST00000558731 SFTA2Q6UW10 78 aa8□□□□□ -1.13
CSPG4P5-201ENST00000558731 ZNF575Q86XF7 245 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms