RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 RHODO00212 210 aa10.32□□□□□ -0.76
TPM1-211ENST00000558314 AKR1C3P42330 323 aa10.32□□□□□ -0.76
TPM1-211ENST00000558314 TOR2AQ5JU69 321 aa10.32□□□□□ -0.76
TPM1-211ENST00000558314 STOML3Q8TAV4 291 aa10.32□□□□□ -0.76
TPM1-211ENST00000558314 BAALCQ8WXS3 180 aa10.32□□□□□ -0.76
TPM1-211ENST00000558314 FMC1Q96HJ9 113 aa10.32□□□□□ -0.76
TPM1-211ENST00000558314 NKX6-2Q9C056 277 aaPredicted RBP10.32□□□□□ -0.76
TPM1-211ENST00000558314 ZFP30Q9Y2G7 519 aa10.32□□□□□ -0.76
TPM1-211ENST00000558314 IGKV2D-24A0A075B6R9 120 aa10.31□□□□□ -0.76
TPM1-211ENST00000558314 A0A087WWC5 75 aa10.31□□□□□ -0.76
TPM1-211ENST00000558314 SMLR1H3BR10 107 aa10.31□□□□□ -0.76
TPM1-211ENST00000558314 UFSP1Q6NVU6 142 aa10.31□□□□□ -0.76
TPM1-211ENST00000558314 LINC00694P0DN24 101 aa10.3□□□□□ -0.76
TPM1-211ENST00000558314 FHITP49789 147 aa10.3□□□□□ -0.76
TPM1-211ENST00000558314 LINC01620Q4KN68 170 aa10.3□□□□□ -0.76
TPM1-211ENST00000558314 PIK3CD-AS1Q5SR53 167 aa10.3□□□□□ -0.76
TPM1-211ENST00000558314 KCNIP4Q6PIL6 250 aa10.3□□□□□ -0.76
TPM1-211ENST00000558314 DNAJC30Q96LL9 226 aa10.3□□□□□ -0.76
TPM1-211ENST00000558314 KLK12Q9UKR0 248 aa10.3□□□□□ -0.76
TPM1-211ENST00000558314 DMBT1Q9UGM3 2413 aaPredicted RBP10.29□□□□□ -0.76
TPM1-211ENST00000558314 FLG2Q5D862 2391 aaPredicted RBP10.29□□□□□ -0.76
TPM1-211ENST00000558314 A0A087WX48 190 aa10.29□□□□□ -0.76
TPM1-211ENST00000558314 PAGE4O60829 102 aa10.29□□□□□ -0.76
TPM1-211ENST00000558314 SSTP61278 116 aa10.29□□□□□ -0.76
TPM1-211ENST00000558314 ZFP82Q8N141 532 aa10.29□□□□□ -0.76
TPM1-211ENST00000558314 UBE2WQ96B02 151 aa10.29□□□□□ -0.76
TPM1-211ENST00000558314 RMI2Q96E14 147 aa10.29□□□□□ -0.76
TPM1-211ENST00000558314 SFRP2Q96HF1 295 aa10.29□□□□□ -0.76
TPM1-211ENST00000558314 CYTL1Q9NRR1 136 aa10.29□□□□□ -0.76
TPM1-211ENST00000558314 MUC21A0A0G2JKD1 596 aa10.28□□□□□ -0.76
TPM1-211ENST00000558314 MUC21A0A140T8X8 626 aa10.28□□□□□ -0.76
TPM1-211ENST00000558314 RBFOX3A6NFN3 312 aa10.28□□□□□ -0.76
TPM1-211ENST00000558314 TMEM262E9PQX1 116 aa10.28□□□□□ -0.76
TPM1-211ENST00000558314 NIT1Q86X76 327 aa10.28□□□□□ -0.76
TPM1-211ENST00000558314 FAM213BQ8TBF2 198 aa10.28□□□□□ -0.76
TPM1-211ENST00000558314 HERC1Q15751 4861 aa10.28□□□□□ -0.76
TPM1-211ENST00000558314 G3V3Q6 166 aa10.27□□□□□ -0.77
TPM1-211ENST00000558314 LTAP01374 205 aa10.27□□□□□ -0.77
TPM1-211ENST00000558314 RPL36AP83881 106 aaKnown RBP10.27□□□□□ -0.77
TPM1-211ENST00000558314 RPL19P84098 196 aaKnown RBP10.27□□□□□ -0.77
TPM1-211ENST00000558314 ZNF56Q15929 161 aa10.27□□□□□ -0.77
TPM1-211ENST00000558314 ZNF674Q2M3X9 581 aa10.27□□□□□ -0.77
TPM1-211ENST00000558314 LINC01559Q495D7 138 aa10.27□□□□□ -0.77
TPM1-211ENST00000558314 SFT2D1Q8WV19 159 aa10.27□□□□□ -0.77
TPM1-211ENST00000558314 RPL36ALQ969Q0 106 aaKnown RBP10.27□□□□□ -0.77
TPM1-211ENST00000558314 DNLZQ5SXM8 178 aa10.26□□□□□ -0.77
TPM1-211ENST00000558314 COX11Q9Y6N1 276 aa10.26□□□□□ -0.77
TPM1-211ENST00000558314 SCO2A0A1W2PP80 73 aa10.25□□□□□ -0.77
TPM1-211ENST00000558314 J3QL48 77 aa10.25□□□□□ -0.77
TPM1-211ENST00000558314 SEC11BP0C7V7 166 aa10.25□□□□□ -0.77
TPM1-211ENST00000558314 PRR27Q6MZM9 219 aa10.25□□□□□ -0.77
TPM1-211ENST00000558314 Q6ZNX1 250 aa10.25□□□□□ -0.77
TPM1-211ENST00000558314 LINC00528Q8N1L1 170 aa10.25□□□□□ -0.77
TPM1-211ENST00000558314 F5H697 171 aa10.24□□□□□ -0.77
TPM1-211ENST00000558314 PFDN1O60925 122 aa10.24□□□□□ -0.77
TPM1-211ENST00000558314 COX8CQ7Z4L0 72 aa10.24□□□□□ -0.77
TPM1-211ENST00000558314 OR10AG1Q8NH19 301 aa10.24□□□□□ -0.77
TPM1-211ENST00000558314 TRBV7-3A0A075B6L6 115 aa10.23□□□□□ -0.77
TPM1-211ENST00000558314 TRBV6-1A0A0K0K1D8 114 aa10.23□□□□□ -0.77
TPM1-211ENST00000558314 PLA2G1BP04054 148 aaKnown RBP10.23□□□□□ -0.77
TPM1-211ENST00000558314 UBE2D3P61077 147 aa10.23□□□□□ -0.77
TPM1-211ENST00000558314 UBE2D2P62837 147 aa10.23□□□□□ -0.77
TPM1-211ENST00000558314 ELOBQ15370 118 aa10.23□□□□□ -0.77
TPM1-211ENST00000558314 SPANXN1Q5VSR9 72 aa10.23□□□□□ -0.77
TPM1-211ENST00000558314 BAGE2Q86Y30 109 aa10.23□□□□□ -0.77
TPM1-211ENST00000558314 Q8N976 141 aa10.23□□□□□ -0.77
TPM1-211ENST00000558314 TCEAL7Q9BRU2 100 aa10.23□□□□□ -0.77
TPM1-211ENST00000558314 ZNF471Q9BX82 626 aaPredicted RBP10.23□□□□□ -0.77
TPM1-211ENST00000558314 VPS13BQ7Z7G8 4022 aa10.23□□□□□ -0.77
TPM1-211ENST00000558314 TRBV10-1A0A0K0K1A3 114 aa10.22□□□□□ -0.77
TPM1-211ENST00000558314 CRPP02741 224 aa10.22□□□□□ -0.77
TPM1-211ENST00000558314 C1QBP02746 253 aa10.22□□□□□ -0.77
TPM1-211ENST00000558314 C15orf54Q8N8G6 183 aa10.22□□□□□ -0.77
TPM1-211ENST00000558314 CHCHD5Q9BSY4 110 aa10.22□□□□□ -0.77
TPM1-211ENST00000558314 SRRM2Q9UQ35 2752 aaKnown RBP10.22□□□□□ -0.77
TPM1-211ENST00000558314 HMSDA8MTL9 139 aa10.21□□□□□ -0.77
TPM1-211ENST00000558314 KCNRGQ8N5I3 272 aa10.21□□□□□ -0.77
TPM1-211ENST00000558314 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.21□□□□□ -0.77
TPM1-211ENST00000558314 TPPP3Q9BW30 176 aa10.21□□□□□ -0.77
TPM1-211ENST00000558314 C1orf43Q9BWL3 253 aa10.21□□□□□ -0.77
TPM1-211ENST00000558314 KANTRA0A1W2PQU2 76 aa10.2□□□□□ -0.78
TPM1-211ENST00000558314 ANGP03950 147 aaKnown RBP10.2□□□□□ -0.78
TPM1-211ENST00000558314 S100A9P06702 114 aaKnown RBP10.2□□□□□ -0.78
TPM1-211ENST00000558314 RAB4BP61018 213 aa10.2□□□□□ -0.78
TPM1-211ENST00000558314 ZNF345Q14585 488 aa10.2□□□□□ -0.78
TPM1-211ENST00000558314 NEXN-AS1Q8NBZ9 246 aa10.2□□□□□ -0.78
TPM1-211ENST00000558314 MYCBP2O75592 4640 aa10.19□□□□□ -0.78
TPM1-211ENST00000558314 TRBV6-8A0A0A6YYG3 113 aa10.19□□□□□ -0.78
TPM1-211ENST00000558314 A0A0D9SG52 128 aa10.19□□□□□ -0.78
TPM1-211ENST00000558314 UMAD1C9J7I0 102 aa10.19□□□□□ -0.78
TPM1-211ENST00000558314 HLA-DQA1P01909 254 aa10.19□□□□□ -0.78
TPM1-211ENST00000558314 H2AFB1P0C5Y9 115 aa10.19□□□□□ -0.78
TPM1-211ENST00000558314 SMIM17P0DL12 118 aa10.19□□□□□ -0.78
TPM1-211ENST00000558314 Q0VG73 95 aa10.19□□□□□ -0.78
TPM1-211ENST00000558314 SCXQ7RTU7 201 aa10.19□□□□□ -0.78
TPM1-211ENST00000558314 TCTE3Q8IZS6 198 aa10.19□□□□□ -0.78
TPM1-211ENST00000558314 MBD3L1Q8WWY6 194 aa10.19□□□□□ -0.78
TPM1-211ENST00000558314 CHCHD7Q9BUK0 85 aa10.19□□□□□ -0.78
TPM1-211ENST00000558314 BCL2L11O43521 198 aa10.18□□□□□ -0.78
TPM1-211ENST00000558314 MGPP08493 103 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 228.3 ms