RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 CD28P10747 220 aa7.81□□□□□ -1.16
TPM1-210ENST00000558264 LINC00315P59091 139 aa7.81□□□□□ -1.16
TPM1-210ENST00000558264 AMTNQ6UX39 209 aa7.81□□□□□ -1.16
TPM1-210ENST00000558264 PCP2Q8IVA1 136 aa7.81□□□□□ -1.16
TPM1-210ENST00000558264 RBMY1BA6NDE4 496 aaKnown RBP7.81□□□□□ -1.16
TPM1-210ENST00000558264 RBMY1EA6NEQ0 496 aaKnown RBP7.81□□□□□ -1.16
TPM1-210ENST00000558264 RBMY1DP0C7P1 496 aaKnown RBP7.81□□□□□ -1.16
TPM1-210ENST00000558264 COX8AP10176 69 aa7.81□□□□□ -1.16
TPM1-210ENST00000558264 SUMO4Q6EEV6 95 aa7.81□□□□□ -1.16
TPM1-210ENST00000558264 FOXI2Q6ZQN5 318 aa7.81□□□□□ -1.16
TPM1-210ENST00000558264 TMEM208Q9BTX3 173 aa7.81□□□□□ -1.16
TPM1-210ENST00000558264 CSTL1Q9H114 145 aa7.81□□□□□ -1.16
TPM1-210ENST00000558264 KIF25-AS1Q9Y6Z4 181 aa7.81□□□□□ -1.16
TPM1-210ENST00000558264 IGHV1OR15-1A0A075B7D0 117 aa7.8□□□□□ -1.16
TPM1-210ENST00000558264 MED14OSP0DP75 135 aa7.8□□□□□ -1.16
TPM1-210ENST00000558264 CD300EQ496F6 205 aaPredicted RBP7.8□□□□□ -1.16
TPM1-210ENST00000558264 C2orf91Q6ZV80 131 aa7.8□□□□□ -1.16
TPM1-210ENST00000558264 RAX2Q96IS3 184 aa7.8□□□□□ -1.16
TPM1-210ENST00000558264 TMEM160Q9NX00 188 aa7.8□□□□□ -1.16
TPM1-210ENST00000558264 MRPL35Q9NZE8 188 aaKnown RBP7.8□□□□□ -1.16
TPM1-210ENST00000558264 IGKV2D-26A0A0A0MRZ7 120 aa7.8□□□□□ -1.16
TPM1-210ENST00000558264 CBY3A6NI87 242 aa7.8□□□□□ -1.16
TPM1-210ENST00000558264 GTSCR1Q86UQ5 136 aa7.8□□□□□ -1.16
TPM1-210ENST00000558264 IGHV3-73A0A0B4J1V6 119 aa7.79□□□□□ -1.16
TPM1-210ENST00000558264 NPSP0C0P6 89 aa7.79□□□□□ -1.16
TPM1-210ENST00000558264 FGF6P10767 208 aa7.79□□□□□ -1.16
TPM1-210ENST00000558264 ZNF56Q15929 161 aa7.79□□□□□ -1.16
TPM1-210ENST00000558264 SVIPQ8NHG7 77 aa7.79□□□□□ -1.16
TPM1-210ENST00000558264 PEMTQ9UBM1 199 aa7.79□□□□□ -1.16
TPM1-210ENST00000558264 DUSP14O95147 198 aaKnown RBP7.79□□□□□ -1.16
TPM1-210ENST00000558264 NXPH4O95158 308 aa7.79□□□□□ -1.16
TPM1-210ENST00000558264 CITED2Q99967 270 aaPredicted RBP7.79□□□□□ -1.16
TPM1-210ENST00000558264 ANK3Q12955 4377 aaKnown RBP7.79□□□□□ -1.16
TPM1-210ENST00000558264 NOTCH3Q9UM47 2321 aa7.78□□□□□ -1.16
TPM1-210ENST00000558264 PCP4P48539 62 aa7.78□□□□□ -1.16
TPM1-210ENST00000558264 ZNF876PQ49A33 203 aa7.78□□□□□ -1.16
TPM1-210ENST00000558264 BVES-AS1Q5T3Y7 98 aa7.78□□□□□ -1.16
TPM1-210ENST00000558264 C9orf85Q96MD7 179 aa7.78□□□□□ -1.16
TPM1-210ENST00000558264 MAP6D1Q9H9H5 199 aa7.78□□□□□ -1.16
TPM1-210ENST00000558264 H3BMM0 161 aa7.78□□□□□ -1.16
TPM1-210ENST00000558264 IGKCP01834 107 aa7.78□□□□□ -1.16
TPM1-210ENST00000558264 DEFB114Q30KQ6 69 aa7.78□□□□□ -1.16
TPM1-210ENST00000558264 ZC2HC1BQ5TFG8 222 aa7.78□□□□□ -1.16
TPM1-210ENST00000558264 ODF3Q96PU9 254 aa7.78□□□□□ -1.16
TPM1-210ENST00000558264 SCGB3A1Q96QR1 104 aa7.78□□□□□ -1.16
TPM1-210ENST00000558264 HHLA3Q9XRX5 114 aa7.78□□□□□ -1.16
TPM1-210ENST00000558264 ZNF256Q9Y2P7 627 aaPredicted RBP7.78□□□□□ -1.16
TPM1-210ENST00000558264 ATP5LO75964 103 aa7.77□□□□□ -1.16
TPM1-210ENST00000558264 C2orf66Q6UXQ4 117 aa7.77□□□□□ -1.16
TPM1-210ENST00000558264 C20orf78Q9BR46 151 aa7.77□□□□□ -1.16
TPM1-210ENST00000558264 JMJD1CQ15652 2540 aa7.77□□□□□ -1.16
TPM1-210ENST00000558264 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.77□□□□□ -1.17
TPM1-210ENST00000558264 HLA-DRB4P13762 266 aa7.77□□□□□ -1.17
TPM1-210ENST00000558264 HLA-DRB4X5D2U9 266 aa7.77□□□□□ -1.17
TPM1-210ENST00000558264 DPM2O94777 84 aa7.76□□□□□ -1.17
TPM1-210ENST00000558264 RPL39P62891 51 aaKnown RBP7.76□□□□□ -1.17
TPM1-210ENST00000558264 ORMDL2Q53FV1 153 aa7.76□□□□□ -1.17
TPM1-210ENST00000558264 TMEM86BQ8N661 226 aa7.76□□□□□ -1.17
TPM1-210ENST00000558264 DEFB125Q8N687 156 aa7.76□□□□□ -1.17
TPM1-210ENST00000558264 CCL24O00175 119 aa7.76□□□□□ -1.17
TPM1-210ENST00000558264 DLEU1O43261 78 aa7.76□□□□□ -1.17
TPM1-210ENST00000558264 CRYGDP07320 174 aa7.76□□□□□ -1.17
TPM1-210ENST00000558264 EMP1P54849 157 aa7.76□□□□□ -1.17
TPM1-210ENST00000558264 PROK1P58294 105 aa7.76□□□□□ -1.17
TPM1-210ENST00000558264 LINC01006Q8NI28 216 aa7.76□□□□□ -1.17
TPM1-210ENST00000558264 IGHV3OR16-12A0A075B7B8 117 aa7.75□□□□□ -1.17
TPM1-210ENST00000558264 SDHAF1A6NFY7 115 aa7.75□□□□□ -1.17
TPM1-210ENST00000558264 P0DMU3 169 aa7.75□□□□□ -1.17
TPM1-210ENST00000558264 FAM231AP0DMU4 169 aa7.75□□□□□ -1.17
TPM1-210ENST00000558264 FAM231CP0DMU5 169 aa7.75□□□□□ -1.17
TPM1-210ENST00000558264 OXLD1Q5BKU9 147 aa7.75□□□□□ -1.17
TPM1-210ENST00000558264 BOD1L2Q8IYS8 172 aa7.75□□□□□ -1.17
TPM1-210ENST00000558264 SYT8Q8NBV8 401 aa7.75□□□□□ -1.17
TPM1-210ENST00000558264 TOMM6Q96B49 74 aa7.75□□□□□ -1.17
TPM1-210ENST00000558264 ZMAT4Q9H898 229 aa7.75□□□□□ -1.17
TPM1-210ENST00000558264 MORN3Q6PF18 240 aaPredicted RBP7.75□□□□□ -1.17
TPM1-210ENST00000558264 TP53TG1Q9Y2A0 90 aa7.75□□□□□ -1.17
TPM1-210ENST00000558264 HIVEP2P31629 2446 aa7.75□□□□□ -1.17
TPM1-210ENST00000558264 A0A087WX48 190 aa7.75□□□□□ -1.17
TPM1-210ENST00000558264 XCL2Q9UBD3 114 aa7.75□□□□□ -1.17
TPM1-210ENST00000558264 SETXQ7Z333 2677 aaKnown RBP7.74□□□□□ -1.17
TPM1-210ENST00000558264 TRAV8-6A0A0B4J262 113 aa7.74□□□□□ -1.17
TPM1-210ENST00000558264 ODF3L2Q3SX64 289 aa7.74□□□□□ -1.17
TPM1-210ENST00000558264 POM121L12Q8N7R1 296 aa7.74□□□□□ -1.17
TPM1-210ENST00000558264 BAALCQ8WXS3 180 aa7.74□□□□□ -1.17
TPM1-210ENST00000558264 Q9UF83 564 aa7.74□□□□□ -1.17
TPM1-210ENST00000558264 C12orf54Q6X4T0 127 aa7.74□□□□□ -1.17
TPM1-210ENST00000558264 ZFP2Q6ZN57 461 aa7.74□□□□□ -1.17
TPM1-210ENST00000558264 COX11Q9Y6N1 276 aa7.74□□□□□ -1.17
TPM1-210ENST00000558264 TRGV11A0A075B6L2 103 aa7.73□□□□□ -1.17
TPM1-210ENST00000558264 K7EMI3 77 aa7.73□□□□□ -1.17
TPM1-210ENST00000558264 M0QY20 66 aa7.73□□□□□ -1.17
TPM1-210ENST00000558264 POLR2KP53803 58 aaKnown RBP7.73□□□□□ -1.17
TPM1-210ENST00000558264 NSUN5P1Q3KNT7 163 aa7.73□□□□□ -1.17
TPM1-210ENST00000558264 TMEM97Q5BJF2 176 aa7.73□□□□□ -1.17
TPM1-210ENST00000558264 LINC01587Q99440 93 aa7.73□□□□□ -1.17
TPM1-210ENST00000558264 WFDC10AQ9H1F0 79 aa7.73□□□□□ -1.17
TPM1-210ENST00000558264 CHTOPQ9Y3Y2 248 aaKnown RBP7.73□□□□□ -1.17
TPM1-210ENST00000558264 K7EP13 123 aa7.73□□□□□ -1.17
TPM1-210ENST00000558264 TAX1BP3O14907 124 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms