RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 TMEM18Q96B42 140 aa5.38□□□□□ -1.55
SPG11-204ENST00000557866 C12orf57Q99622 126 aa5.38□□□□□ -1.55
SPG11-204ENST00000557866 AGRNO00468 2067 aa5.37□□□□□ -1.55
SPG11-204ENST00000557866 M0R381 172 aa5.37□□□□□ -1.55
SPG11-204ENST00000557866 GIG44P09565 113 aaPredicted RBP5.37□□□□□ -1.55
SPG11-204ENST00000557866 PMCHP20382 165 aa5.37□□□□□ -1.55
SPG11-204ENST00000557866 CMC4P56277 68 aaPredicted RBP5.37□□□□□ -1.55
SPG11-204ENST00000557866 LINC00315P59091 139 aa5.37□□□□□ -1.55
SPG11-204ENST00000557866 RNASEKQ6P5S7 137 aaKnown RBP5.37□□□□□ -1.55
SPG11-204ENST00000557866 STHQ8IWL8 128 aa5.37□□□□□ -1.55
SPG11-204ENST00000557866 ORMDL3Q8N138 153 aa5.37□□□□□ -1.55
SPG11-204ENST00000557866 C1orf158Q8N1D5 194 aa5.37□□□□□ -1.55
SPG11-204ENST00000557866 NRACQ8N912 160 aa5.37□□□□□ -1.55
SPG11-204ENST00000557866 PRELID3AQ96N28 172 aa5.37□□□□□ -1.55
SPG11-204ENST00000557866 FAM110AQ9BQ89 295 aa5.37□□□□□ -1.55
SPG11-204ENST00000557866 JPT2Q9H910 190 aa5.37□□□□□ -1.55
SPG11-204ENST00000557866 PHLDA3Q9Y5J5 127 aa5.37□□□□□ -1.55
SPG11-204ENST00000557866 KIF25-AS1Q9Y6Z4 181 aa5.37□□□□□ -1.55
SPG11-204ENST00000557866 JMJD1CQ15652 2540 aa5.37□□□□□ -1.55
SPG11-204ENST00000557866 TRAV26-2A0A0B4J265 109 aa5.36□□□□□ -1.55
SPG11-204ENST00000557866 LOC389332A0A1B0GUA5 103 aa5.36□□□□□ -1.55
SPG11-204ENST00000557866 LINC00614P0C842 121 aa5.36□□□□□ -1.55
SPG11-204ENST00000557866 CKS2P33552 79 aa5.36□□□□□ -1.55
SPG11-204ENST00000557866 IFI27P40305 119 aaPredicted RBP5.36□□□□□ -1.55
SPG11-204ENST00000557866 AMTP48728 403 aa5.36□□□□□ -1.55
SPG11-204ENST00000557866 JOSD1Q15040 202 aaPredicted RBP5.36□□□□□ -1.55
SPG11-204ENST00000557866 PMCHL1Q16048 86 aa5.36□□□□□ -1.55
SPG11-204ENST00000557866 PRIMA1Q86XR5 153 aa5.36□□□□□ -1.55
SPG11-204ENST00000557866 C14orf178Q8N769 122 aaPredicted RBP5.36□□□□□ -1.55
SPG11-204ENST00000557866 POM121L12Q8N7R1 296 aa5.36□□□□□ -1.55
SPG11-204ENST00000557866 LINC00467Q9BRT7 94 aa5.36□□□□□ -1.55
SPG11-204ENST00000557866 SAMD10Q9BYL1 202 aa5.36□□□□□ -1.55
SPG11-204ENST00000557866 XCL2Q9UBD3 114 aa5.36□□□□□ -1.55
SPG11-204ENST00000557866 TRGV11A0A075B6L2 103 aa5.35□□□□□ -1.55
SPG11-204ENST00000557866 IGHV1-24A0A0C4DH33 117 aa5.35□□□□□ -1.55
SPG11-204ENST00000557866 CBY3A6NI87 242 aa5.35□□□□□ -1.55
SPG11-204ENST00000557866 TNFRSF6BO95407 300 aa5.35□□□□□ -1.55
SPG11-204ENST00000557866 PPBPP02775 128 aa5.35□□□□□ -1.55
SPG11-204ENST00000557866 RPL35AP18077 110 aaKnown RBP5.35□□□□□ -1.55
SPG11-204ENST00000557866 SMIM15Q7Z3B0 74 aa5.35□□□□□ -1.55
SPG11-204ENST00000557866 Q8N976 141 aa5.35□□□□□ -1.55
SPG11-204ENST00000557866 WFDC9Q8NEX5 89 aa5.35□□□□□ -1.55
SPG11-204ENST00000557866 CHCHD1Q96BP2 118 aaKnown RBP5.35□□□□□ -1.55
SPG11-204ENST00000557866 TENM1Q9UKZ4 2725 aa5.35□□□□□ -1.55
SPG11-204ENST00000557866 FBN1P35555 2871 aaKnown RBP5.34□□□□□ -1.55
SPG11-204ENST00000557866 IGLV2-18A0A075B6J9 118 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 A0A096LNJ9 63 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 HSBP1O75506 76 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 INSP01308 110 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 HTN1P15515 57 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 AZU1P20160 251 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 FHL2Q14192 279 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 C9orf66Q5T8R8 295 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 LINC00173Q6ZV60 143 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 DEFB125Q8N687 156 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 C11orf72Q8NBR9 251 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 PRSS3P2Q8NHM4 247 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 IL17DQ8TAD2 202 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 RASL10AQ92737 203 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 MRAP2Q96G30 205 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 AP1S3Q96PC3 154 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 LINC01587Q99440 93 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 C20orf144Q9BQM9 153 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 DPH3P1Q9H4G8 78 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 NIT2Q9NQR4 276 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 GSN-AS1Q9NRJ2 163 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 LAMTOR2Q9Y2Q5 125 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 VWFP04275 2813 aa5.34□□□□□ -1.55
SPG11-204ENST00000557866 A0A087WWL8 130 aa5.33□□□□□ -1.56
SPG11-204ENST00000557866 LINC01546A6NGU7 62 aa5.33□□□□□ -1.56
SPG11-204ENST00000557866 PRSS47A8MTI9 375 aa5.33□□□□□ -1.56
SPG11-204ENST00000557866 CRYGDP07320 174 aa5.33□□□□□ -1.56
SPG11-204ENST00000557866 MGPP08493 103 aa5.33□□□□□ -1.56
SPG11-204ENST00000557866 C3orf79P0CE67 100 aa5.33□□□□□ -1.56
SPG11-204ENST00000557866 INSL3P51460 131 aa5.33□□□□□ -1.56
SPG11-204ENST00000557866 FA2HQ7L5A8 372 aa5.33□□□□□ -1.56
SPG11-204ENST00000557866 SPATA12Q7Z6I5 190 aa5.33□□□□□ -1.56
SPG11-204ENST00000557866 TEP1Q99973 2627 aaKnown RBP5.32□□□□□ -1.56
SPG11-204ENST00000557866 DNAH3Q8TD57 4116 aa5.32□□□□□ -1.56
SPG11-204ENST00000557866 IGLL1P15814 213 aa5.32□□□□□ -1.56
SPG11-204ENST00000557866 KRTDAPP60985 99 aa5.32□□□□□ -1.56
SPG11-204ENST00000557866 ZNF876PQ49A33 203 aa5.32□□□□□ -1.56
SPG11-204ENST00000557866 SUMO4Q6EEV6 95 aa5.32□□□□□ -1.56
SPG11-204ENST00000557866 Q8N8P6 123 aa5.32□□□□□ -1.56
SPG11-204ENST00000557866 CSNK1G2-AS1Q8NCQ2 148 aa5.32□□□□□ -1.56
SPG11-204ENST00000557866 PTH2Q96A98 100 aa5.32□□□□□ -1.56
SPG11-204ENST00000557866 RPL39LQ96EH5 51 aaKnown RBP5.32□□□□□ -1.56
SPG11-204ENST00000557866 MAP1LC3AQ9H492 121 aa5.32□□□□□ -1.56
SPG11-204ENST00000557866 MUC4Q99102 2169 aa5.32□□□□□ -1.56
SPG11-204ENST00000557866 ATRQ13535 2644 aa5.31□□□□□ -1.56
SPG11-204ENST00000557866 IGHV3OR16-12A0A075B7B8 117 aa5.31□□□□□ -1.56
SPG11-204ENST00000557866 M0R2P5 195 aa5.31□□□□□ -1.56
SPG11-204ENST00000557866 SCGB1D1O95968 90 aa5.31□□□□□ -1.56
SPG11-204ENST00000557866 ZNF415Q09FC8 603 aa5.31□□□□□ -1.56
SPG11-204ENST00000557866 UFSP1Q6NVU6 142 aa5.31□□□□□ -1.56
SPG11-204ENST00000557866 MORN3Q6PF18 240 aaPredicted RBP5.31□□□□□ -1.56
SPG11-204ENST00000557866 RNASE8Q8TDE3 154 aaKnown RBP5.31□□□□□ -1.56
SPG11-204ENST00000557866 ANK2Q01484 3957 aa5.3□□□□□ -1.56
SPG11-204ENST00000557866 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
SPG11-204ENST00000557866 M0QY20 66 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms