RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 PLXNB1O43157 2135 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 ZFC3H1O60293 1989 aaKnown RBP1.67□□□□□ -2.14
TRAV28-201ENST00000557548 SCN8AQ9UQD0 1980 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 SEC16AO15027 2179 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 A0A1W2PNM2 257 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 A0A1W2PNU3 283 aaPredicted RBP1.67□□□□□ -2.14
TRAV28-201ENST00000557548 hDV103S1A0JD37 113 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 OOSP1A8MZH6 123 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 H7C2G1 150 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 J3QLW9 94 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 ZNF737O75373 536 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 SNCGO76070 127 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 IGLV6-57P01721 117 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 SHBGP04278 402 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 RNASE2P10153 161 aaKnown RBP1.67□□□□□ -2.14
TRAV28-201ENST00000557548 ATP5EP56381 51 aaPredicted RBP1.67□□□□□ -2.14
TRAV28-201ENST00000557548 ESRGQ1W209 222 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 MIC13Q5XKP0 118 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 ATP11AUNQ6ZP68 121 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 Q6ZS52 159 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 Q6ZS92 163 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 Q8N2B8 174 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 Q8NDZ9 215 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 OR2T35Q8NGX2 323 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 ATP6V0E2Q8NHE4 81 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 VSTM2AQ8TAG5 236 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 SPTSSAQ969W0 71 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 HYLS1Q96M11 299 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 ATG5Q9H1Y0 275 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 MED9Q9NWA0 146 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 BET1LQ9NYM9 111 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 LCTP09848 1927 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 GREB1Q4ZG55 1949 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 SZT2Q5T011 3432 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 MKI67P46013 3256 aaKnown RBP1.67□□□□□ -2.14
TRAV28-201ENST00000557548 TANC2Q9HCD6 1990 aa1.67□□□□□ -2.14
TRAV28-201ENST00000557548 CACNA1DQ01668 2161 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 HTTP42858 3142 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 MYLKQ15746 1914 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 PIGBOS1A0A0B4J2F0 54 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 IGHV1-24A0A0C4DH33 117 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 IGKV2-24A0A0C4DH68 120 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 M0R233 179 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 GNRH2O43555 120 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 SSSCA1O60232 199 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 PITX3O75364 302 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 IL5P05113 134 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 CTSGP08311 255 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 IGLC1P0CG04 106 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 PIPP12273 146 aaPredicted RBP1.66□□□□□ -2.14
TRAV28-201ENST00000557548 IL7P13232 177 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 IQCJQ1A5X6 159 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 FAM27BQ5VT28 67 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 LINC00304Q8N9R0 145 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 LINC00301Q8NCQ3 95 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 CMTM2Q8TAZ6 248 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 LSM10Q969L4 123 aaKnown RBP1.66□□□□□ -2.14
TRAV28-201ENST00000557548 NABP2Q9BQ15 211 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 CST11Q9H112 138 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 C14orf132Q9NPU4 83 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 TMEM242Q9NWH2 141 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 FAM215AQ9Y5M1 114 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 PLXNA3P51805 1871 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 DOCK1Q14185 1865 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 MYO9BQ13459 2157 aa1.66□□□□□ -2.14
TRAV28-201ENST00000557548 HELZP42694 1942 aaKnown RBP1.66□□□□□ -2.14
TRAV28-201ENST00000557548 DDX60LQ5H9U9 1706 aaKnown RBP1.66□□□□□ -2.14
TRAV28-201ENST00000557548 LOC285556D6RIA3 1793 aa1.65□□□□□ -2.14
TRAV28-201ENST00000557548 COL1A2P08123 1366 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 ZNF407Q9C0G0 2248 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 A0A0J9YX75 114 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 SPRR5A0A1B0GTR4 108 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 C11orf86A6NJI1 115 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 ZNF705FA8MVS1 300 aaPredicted RBP1.65□□□□□ -2.15
TRAV28-201ENST00000557548 NDUFB6O95139 128 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 IGKV1-17P01599 117 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 DCDP81605 110 aaKnown RBP1.65□□□□□ -2.15
TRAV28-201ENST00000557548 Q0VG73 95 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 FOXF1Q12946 379 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 PEA15Q15121 130 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 SPANXN5Q5MJ07 72 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 TSKUQ8WUA8 353 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 Q96M85 177 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 SMIM7Q9BQ49 75 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 SLC50A1Q9BRV3 221 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 HHLA3Q9XRX5 114 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 LINC00312Q9Y6C7 94 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 TRPM6Q9BX84 2022 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 MYH4Q9Y623 1939 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 REV3LO60673 3130 aa1.65□□□□□ -2.15
TRAV28-201ENST00000557548 SSC5DA1L4H1 1573 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 CEP290O15078 2479 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 HEATR5AQ86XA9 2040 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 SIP14410 1827 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 IGLV10-54A0A075B6I4 117 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 IGKV1D-17A0A075B6S4 117 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 UBE2L5PA0A1B0GUS4 154 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 A6NN06 94 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 E7EQL1 145 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 H3BQ15 152 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms