RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 OR2H1Q9GZK4 316 aa2.58□□□□□ -2
MTHFD1-216ENST00000557539 BIN3Q9NQY0 253 aa2.58□□□□□ -2
MTHFD1-216ENST00000557539 NAT8Q9UHE5 227 aa2.58□□□□□ -2
MTHFD1-216ENST00000557539 BAIAP2Q9UQB8 552 aa2.58□□□□□ -2
MTHFD1-216ENST00000557539 FABP5P3A8MUU1 101 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 NPFFO15130 113 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 CREBL2O60519 120 aaPredicted RBP2.57□□□□□ -2
MTHFD1-216ENST00000557539 GADD45GO95257 159 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 IFNA21P01568 189 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 IFNA17P01571 189 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 C1QBP02746 253 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 UCHL1P09936 223 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 RNASE2P10153 161 aaKnown RBP2.57□□□□□ -2
MTHFD1-216ENST00000557539 KRTAP10-4P60372 401 aaPredicted RBP2.57□□□□□ -2
MTHFD1-216ENST00000557539 PCBD1P61457 104 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 HIST1H4AP62805 103 aaKnown RBP2.57□□□□□ -2
MTHFD1-216ENST00000557539 GNG5P63218 68 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 HES1Q14469 280 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 RHEBQ15382 184 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 ZNF181Q2M3W8 571 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 PABPC1L2AQ5JQF8 200 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 AKR1C8PQ5T2L2 129 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 LINC01590Q5TEZ4 76 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 LHFPL1Q86WI0 220 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 DHFR2Q86XF0 187 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 OR51T1Q8NGJ9 327 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 OR8D4Q8NGM9 314 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 DNAJC9Q8WXX5 260 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 Q96M85 177 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 TVP23BQ9NYZ1 205 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 PRNDQ9UKY0 176 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 LHFPL6Q9Y693 200 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 MUC17Q685J3 4493 aa2.57□□□□□ -2
MTHFD1-216ENST00000557539 IGLV10-54A0A075B6I4 117 aa2.56□□□□□ -2
MTHFD1-216ENST00000557539 IQCF6A8MYZ5 107 aa2.56□□□□□ -2
MTHFD1-216ENST00000557539 PPP5D1E7EU14 171 aa2.56□□□□□ -2
MTHFD1-216ENST00000557539 IGLV3-1P01715 115 aa2.56□□□□□ -2
MTHFD1-216ENST00000557539 IGHV3-7P01780 117 aa2.56□□□□□ -2
MTHFD1-216ENST00000557539 GZMHP20718 246 aa2.56□□□□□ -2
MTHFD1-216ENST00000557539 RPL28P46779 137 aaKnown RBP2.56□□□□□ -2
MTHFD1-216ENST00000557539 ATP5G3P48201 142 aa2.56□□□□□ -2
MTHFD1-216ENST00000557539 SLC35E3Q7Z769 313 aa2.56□□□□□ -2
MTHFD1-216ENST00000557539 BPIFA4PQ86YQ2 179 aa2.56□□□□□ -2
MTHFD1-216ENST00000557539 STX19Q8N4C7 294 aa2.56□□□□□ -2
MTHFD1-216ENST00000557539 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.56□□□□□ -2
MTHFD1-216ENST00000557539 OR4C16Q8NGL9 310 aa2.56□□□□□ -2
MTHFD1-216ENST00000557539 C11orf40Q8WZ69 217 aa2.56□□□□□ -2
MTHFD1-216ENST00000557539 FAM107BQ9H098 131 aa2.56□□□□□ -2
MTHFD1-216ENST00000557539 CMC2Q9NRP2 79 aa2.56□□□□□ -2
MTHFD1-216ENST00000557539 IER3IP1Q9Y5U9 82 aa2.56□□□□□ -2
MTHFD1-216ENST00000557539 DSTQ03001 7570 aaKnown RBP2.55□□□□□ -2
MTHFD1-216ENST00000557539 TRAV4A0A0B4J268 109 aa2.55□□□□□ -2
MTHFD1-216ENST00000557539 IRGMA1A4Y4 181 aa2.55□□□□□ -2
MTHFD1-216ENST00000557539 H7C1C5 153 aa2.55□□□□□ -2
MTHFD1-216ENST00000557539 RER1O15258 196 aa2.55□□□□□ -2
MTHFD1-216ENST00000557539 NDUFC2O95298 119 aa2.55□□□□□ -2
MTHFD1-216ENST00000557539 IGKV1-17P01599 117 aa2.55□□□□□ -2
MTHFD1-216ENST00000557539 LGALS1P09382 135 aaKnown RBP2.55□□□□□ -2
MTHFD1-216ENST00000557539 SPI1P17947 270 aa2.55□□□□□ -2
MTHFD1-216ENST00000557539 LCN6P62502 163 aa2.55□□□□□ -2
MTHFD1-216ENST00000557539 PRB3Q04118 309 aaPredicted RBP2.55□□□□□ -2
MTHFD1-216ENST00000557539 LINC00304Q8N9R0 145 aa2.55□□□□□ -2
MTHFD1-216ENST00000557539 CANT1Q8WVQ1 401 aa2.55□□□□□ -2
MTHFD1-216ENST00000557539 TVP23CQ96ET8 276 aa2.55□□□□□ -2
MTHFD1-216ENST00000557539 C2orf50Q96LR7 162 aa2.55□□□□□ -2
MTHFD1-216ENST00000557539 OR2J1Q9GZK6 312 aa2.55□□□□□ -2
MTHFD1-216ENST00000557539 SMPXQ9UHP9 88 aa2.55□□□□□ -2
MTHFD1-216ENST00000557539 TIMM9Q9Y5J7 89 aa2.55□□□□□ -2
MTHFD1-216ENST00000557539 IGKV1D-17A0A075B6S4 117 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 TRAV41A0A0B4J266 112 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 BUB1B-PAK6H3BSN5 160 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 J3QRE1 110 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 J3QRK9 145 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 HMGN1P05114 100 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 DEFA4P12838 97 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 EIF2B2P49770 351 aaKnown RBP2.54□□□□□ -2
MTHFD1-216ENST00000557539 ZNF80P51504 273 aaPredicted RBP2.54□□□□□ -2
MTHFD1-216ENST00000557539 PIGPP57054 158 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 OR8B8Q15620 311 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 KISS1Q15726 138 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 C12orf73Q69YU5 71 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 VMO1Q7Z5L0 202 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 LRRC18Q8N456 261 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 OTOSQ8NHW6 89 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 GPER1Q99527 375 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 PBDC1Q9BVG4 233 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 ZNF471Q9BX82 626 aaPredicted RBP2.54□□□□□ -2
MTHFD1-216ENST00000557539 LYRM2Q9NU23 88 aaPredicted RBP2.54□□□□□ -2
MTHFD1-216ENST00000557539 SLC39A9Q9NUM3 307 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 SSR3Q9UNL2 185 aa2.54□□□□□ -2
MTHFD1-216ENST00000557539 NOP16Q9Y3C1 178 aaKnown RBP2.54□□□□□ -2
MTHFD1-216ENST00000557539 TRBV19A0A075B6N1 114 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 TRAV38-1A0A0B4J264 116 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 RIIAD1A6NNX1 92 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 ODF3BA8MYP8 253 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 C1orf196B1AJZ1 125 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 M0R135 149 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 GPR31O00270 319 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 IFNA7P01567 189 aa2.53□□□□□ -2
MTHFD1-216ENST00000557539 IFNGP01579 166 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms