RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 MRPS16Q9Y3D3 137 aaKnown RBP5.79□□□□□ -1.48
PSEN1-223ENST00000557511 LINC00588Q9Y4M8 146 aa5.79□□□□□ -1.48
PSEN1-223ENST00000557511 HYDINQ4G0P3 5121 aa5.78□□□□□ -1.48
PSEN1-223ENST00000557511 TRAV9-2A0A087WT02 112 aa5.78□□□□□ -1.48
PSEN1-223ENST00000557511 K7EQD1 137 aa5.78□□□□□ -1.48
PSEN1-223ENST00000557511 SMIM17P0DL12 118 aa5.78□□□□□ -1.48
PSEN1-223ENST00000557511 GATA1P15976 413 aaPredicted RBP5.78□□□□□ -1.48
PSEN1-223ENST00000557511 ESRGQ1W209 222 aa5.78□□□□□ -1.48
PSEN1-223ENST00000557511 FAM74A4Q5TZK3 123 aa5.78□□□□□ -1.48
PSEN1-223ENST00000557511 LINC00336Q6ZUF6 198 aa5.78□□□□□ -1.48
PSEN1-223ENST00000557511 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.78□□□□□ -1.48
PSEN1-223ENST00000557511 OR2D3Q8NGH3 330 aa5.78□□□□□ -1.48
PSEN1-223ENST00000557511 TPPP3Q9BW30 176 aa5.78□□□□□ -1.48
PSEN1-223ENST00000557511 NBDYA0A0U1RRE5 68 aa5.77□□□□□ -1.49
PSEN1-223ENST00000557511 SIVA1O15304 175 aa5.77□□□□□ -1.49
PSEN1-223ENST00000557511 RAB14P61106 215 aa5.77□□□□□ -1.49
PSEN1-223ENST00000557511 RPL19P84098 196 aaKnown RBP5.77□□□□□ -1.49
PSEN1-223ENST00000557511 C1orf134Q5TEV5 83 aa5.77□□□□□ -1.49
PSEN1-223ENST00000557511 SLC25A29Q8N8R3 303 aa5.77□□□□□ -1.49
PSEN1-223ENST00000557511 ZNRF2Q8NHG8 242 aa5.77□□□□□ -1.49
PSEN1-223ENST00000557511 UPK3BQ9BT76 320 aa5.77□□□□□ -1.49
PSEN1-223ENST00000557511 PARLQ9H300 379 aa5.77□□□□□ -1.49
PSEN1-223ENST00000557511 LYSTQ99698 3801 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 TRAV8-6A0A0B4J262 113 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 A0A1W2PPQ1 181 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 F2Z2F3 143 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 ZNF561-AS1K7EIQ3 104 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 NDUFS6O75380 124 aaKnown RBP5.76□□□□□ -1.49
PSEN1-223ENST00000557511 NXPH4O95158 308 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 OR5AL1P0C617 328 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 CACNG7P62955 275 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 PEA15Q15121 130 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 TEX261Q6UWH6 196 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 LYPD5Q6UWN5 251 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 FER1L6-AS1Q8NA97 138 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 LYPD6BQ8NI32 183 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 SFRP2Q96HF1 295 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 FAM210AQ96ND0 272 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 AP1S3Q96PC3 154 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 SMIM7Q9BQ49 75 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 SCRT2Q9NQ03 307 aa5.76□□□□□ -1.49
PSEN1-223ENST00000557511 DNAH1Q9P2D7 4330 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 A0A087WWL8 130 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 GAGE12JA6NER3 117 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 ZNF727A8MUV8 499 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 F5H697 171 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 GATCO43716 136 aaKnown RBP5.75□□□□□ -1.49
PSEN1-223ENST00000557511 EVI2AP22794 236 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 SSTP61278 116 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 RPL36AP83881 106 aaKnown RBP5.75□□□□□ -1.49
PSEN1-223ENST00000557511 GAGE1Q13065 139 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 GAGE4Q13068 117 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 GAGE5Q13069 117 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 ZNF56Q15929 161 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 GAGE13Q4V321 117 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 OR10J3Q5JRS4 329 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 SMIM15Q7Z3B0 74 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 NUDT10Q8NFP7 164 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 OR10AG1Q8NH19 301 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 ATP6V0E2Q8NHE4 81 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 RPL36ALQ969Q0 106 aaKnown RBP5.75□□□□□ -1.49
PSEN1-223ENST00000557511 BORCS7Q96B45 105 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 NUDT11Q96G61 164 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 LY96Q9Y6Y9 160 aa5.75□□□□□ -1.49
PSEN1-223ENST00000557511 LOC100131303A0A0U1RQF7 123 aa5.74□□□□□ -1.49
PSEN1-223ENST00000557511 C19orf71A6NCJ1 209 aa5.74□□□□□ -1.49
PSEN1-223ENST00000557511 KRTAP9-7A8MTY7 169 aa5.74□□□□□ -1.49
PSEN1-223ENST00000557511 SNAI2O43623 268 aa5.74□□□□□ -1.49
PSEN1-223ENST00000557511 TRGC1P0CF51 173 aa5.74□□□□□ -1.49
PSEN1-223ENST00000557511 BTF3P20290 206 aaKnown RBP5.74□□□□□ -1.49
PSEN1-223ENST00000557511 TIRAPP58753 221 aa5.74□□□□□ -1.49
PSEN1-223ENST00000557511 ERVFC1-1P60608 527 aa5.74□□□□□ -1.49
PSEN1-223ENST00000557511 KCNIP4Q6PIL6 250 aa5.74□□□□□ -1.49
PSEN1-223ENST00000557511 C6orf223Q8N319 242 aa5.74□□□□□ -1.49
PSEN1-223ENST00000557511 OCC1Q8TAD7 63 aa5.74□□□□□ -1.49
PSEN1-223ENST00000557511 RPP21Q9H633 154 aaKnown RBP5.74□□□□□ -1.49
PSEN1-223ENST00000557511 JPT2Q9H910 190 aa5.74□□□□□ -1.49
PSEN1-223ENST00000557511 TRBV20OR9-2A0A075B6H5 130 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 A0A087WWC5 75 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 MUC21A0A0G2JKD1 596 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 TRBV10-1A0A0K0K1A3 114 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 MUC21A0A140T8X8 626 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 PRSS29PA6NIE9 313 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 A8MWL6 223 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 H7C1H1 209 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 K7EP13 123 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 IGLV2-8P01709 118 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 RAB4BP61018 213 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 FAM74A3Q4VXF1 159 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 Q6ZR54 194 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 C10orf126Q8N4M7 172 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 C14orf178Q8N769 122 aaPredicted RBP5.73□□□□□ -1.49
PSEN1-223ENST00000557511 C15orf54Q8N8G6 183 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 SAMD10Q9BYL1 202 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 RNASE7Q9H1E1 156 aaKnown RBP5.73□□□□□ -1.49
PSEN1-223ENST00000557511 GTSF1LQ9H1H1 148 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 SMDT1Q9H4I9 107 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 MUC4Q99102 2169 aa5.73□□□□□ -1.49
PSEN1-223ENST00000557511 IGHV3-38A0A0C4DH36 116 aa5.72□□□□□ -1.49
PSEN1-223ENST00000557511 CRYGDP07320 174 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms