RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 EPDR1Q9UM22 224 aa9.52□□□□□ -0.89
VRTN-202ENST00000557177 IGKV3D-20A0A0C4DH25 116 aa9.51□□□□□ -0.89
VRTN-202ENST00000557177 KRTAP29-1A8MX34 341 aaPredicted RBP9.51□□□□□ -0.89
VRTN-202ENST00000557177 LECT2O14960 151 aa9.51□□□□□ -0.89
VRTN-202ENST00000557177 SUMO1P63165 101 aaKnown RBP9.51□□□□□ -0.89
VRTN-202ENST00000557177 UFSP1Q6NVU6 142 aa9.51□□□□□ -0.89
VRTN-202ENST00000557177 DAZ4Q86SG3 579 aaKnown RBP9.51□□□□□ -0.89
VRTN-202ENST00000557177 PRNTQ86SH4 94 aa9.51□□□□□ -0.89
VRTN-202ENST00000557177 LINC00528Q8N1L1 170 aa9.51□□□□□ -0.89
VRTN-202ENST00000557177 CYB561D1Q8N8Q1 229 aa9.51□□□□□ -0.89
VRTN-202ENST00000557177 LINC00479Q96M42 142 aa9.51□□□□□ -0.89
VRTN-202ENST00000557177 SMDT1Q9H4I9 107 aa9.51□□□□□ -0.89
VRTN-202ENST00000557177 DAZ3Q9NR90 486 aaKnown RBP9.51□□□□□ -0.89
VRTN-202ENST00000557177 Q9UF83 564 aa9.51□□□□□ -0.89
VRTN-202ENST00000557177 GAGE12JA6NER3 117 aa9.5□□□□□ -0.89
VRTN-202ENST00000557177 A8MWV9 139 aa9.5□□□□□ -0.89
VRTN-202ENST00000557177 GAGE1Q13065 139 aa9.5□□□□□ -0.89
VRTN-202ENST00000557177 GAGE4Q13068 117 aa9.5□□□□□ -0.89
VRTN-202ENST00000557177 GAGE5Q13069 117 aa9.5□□□□□ -0.89
VRTN-202ENST00000557177 GAGE13Q4V321 117 aa9.5□□□□□ -0.89
VRTN-202ENST00000557177 SAPCD1Q5SSQ6 148 aa9.5□□□□□ -0.89
VRTN-202ENST00000557177 MBD3L1Q8WWY6 194 aa9.5□□□□□ -0.89
VRTN-202ENST00000557177 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.49□□□□□ -0.89
VRTN-202ENST00000557177 FAM213BQ8TBF2 198 aa9.49□□□□□ -0.89
VRTN-202ENST00000557177 TMEM167BQ9NRX6 74 aa9.49□□□□□ -0.89
VRTN-202ENST00000557177 FAT3Q8TDW7 4589 aa9.48□□□□□ -0.89
VRTN-202ENST00000557177 A0A087WWC5 75 aa9.48□□□□□ -0.89
VRTN-202ENST00000557177 NDUFS6O75380 124 aaKnown RBP9.48□□□□□ -0.89
VRTN-202ENST00000557177 CXorf1O96002 111 aa9.48□□□□□ -0.89
VRTN-202ENST00000557177 H2AFB1P0C5Y9 115 aa9.48□□□□□ -0.89
VRTN-202ENST00000557177 C14orf178Q8N769 122 aaPredicted RBP9.48□□□□□ -0.89
VRTN-202ENST00000557177 DEFB104AQ8WTQ1 72 aa9.48□□□□□ -0.89
VRTN-202ENST00000557177 SAMD10Q9BYL1 202 aa9.48□□□□□ -0.89
VRTN-202ENST00000557177 JPT2Q9H910 190 aa9.48□□□□□ -0.89
VRTN-202ENST00000557177 IL36BQ9NZH7 164 aa9.48□□□□□ -0.89
VRTN-202ENST00000557177 COX11Q9Y6N1 276 aa9.48□□□□□ -0.89
VRTN-202ENST00000557177 HMCN2Q8NDA2 5059 aa9.47□□□□□ -0.89
VRTN-202ENST00000557177 A0A1W2PRE2 83 aa9.47□□□□□ -0.89
VRTN-202ENST00000557177 TMEM218A2RU14 115 aa9.47□□□□□ -0.89
VRTN-202ENST00000557177 S100A4P26447 101 aaKnown RBP9.47□□□□□ -0.89
VRTN-202ENST00000557177 ASIPP42127 132 aa9.47□□□□□ -0.89
VRTN-202ENST00000557177 FGF8P55075 233 aaPredicted RBP9.47□□□□□ -0.89
VRTN-202ENST00000557177 C10orf91Q5T1B1 145 aa9.47□□□□□ -0.89
VRTN-202ENST00000557177 SCXQ7RTU7 201 aa9.47□□□□□ -0.89
VRTN-202ENST00000557177 BAALCQ8WXS3 180 aa9.47□□□□□ -0.89
VRTN-202ENST00000557177 ARL2-SNX15V9GYD0 113 aa9.47□□□□□ -0.89
VRTN-202ENST00000557177 TRAV34A0A0B4J273 112 aa9.46□□□□□ -0.9
VRTN-202ENST00000557177 FABP5P3A8MUU1 101 aa9.46□□□□□ -0.9
VRTN-202ENST00000557177 TAGLN2P37802 199 aaKnown RBP9.46□□□□□ -0.9
VRTN-202ENST00000557177 FHITP49789 147 aa9.46□□□□□ -0.9
VRTN-202ENST00000557177 KRTAP10-4P60372 401 aaPredicted RBP9.46□□□□□ -0.9
VRTN-202ENST00000557177 PEA15Q15121 130 aa9.46□□□□□ -0.9
VRTN-202ENST00000557177 LINC01620Q4KN68 170 aa9.46□□□□□ -0.9
VRTN-202ENST00000557177 DMRTA1Q5VZB9 504 aa9.46□□□□□ -0.9
VRTN-202ENST00000557177 NIT1Q86X76 327 aa9.46□□□□□ -0.9
VRTN-202ENST00000557177 DNAJC30Q96LL9 226 aa9.46□□□□□ -0.9
VRTN-202ENST00000557177 CARHSP1Q9Y2V2 147 aaKnown RBP9.46□□□□□ -0.9
VRTN-202ENST00000557177 CTXND1A0A1B0GTU2 59 aa9.45□□□□□ -0.9
VRTN-202ENST00000557177 H3BVH4 76 aa9.45□□□□□ -0.9
VRTN-202ENST00000557177 DNLZQ5SXM8 178 aa9.45□□□□□ -0.9
VRTN-202ENST00000557177 RMI2Q96E14 147 aa9.45□□□□□ -0.9
VRTN-202ENST00000557177 SEC11CQ9BY50 192 aa9.45□□□□□ -0.9
VRTN-202ENST00000557177 ACTR3CQ9C0K3 210 aaPredicted RBP9.45□□□□□ -0.9
VRTN-202ENST00000557177 B4DEV8 164 aa9.44□□□□□ -0.9
VRTN-202ENST00000557177 RHODO00212 210 aa9.44□□□□□ -0.9
VRTN-202ENST00000557177 CRIP1P50238 77 aa9.44□□□□□ -0.9
VRTN-202ENST00000557177 Q86TA4 180 aa9.44□□□□□ -0.9
VRTN-202ENST00000557177 Q8N976 141 aa9.44□□□□□ -0.9
VRTN-202ENST00000557177 CHAC1Q9BUX1 264 aa9.44□□□□□ -0.9
VRTN-202ENST00000557177 IGKV2D-24A0A075B6R9 120 aa9.43□□□□□ -0.9
VRTN-202ENST00000557177 RBFOX3A6NFN3 312 aa9.43□□□□□ -0.9
VRTN-202ENST00000557177 PEX7O00628 323 aa9.43□□□□□ -0.9
VRTN-202ENST00000557177 ZNF726P1Q15940 193 aa9.43□□□□□ -0.9
VRTN-202ENST00000557177 ATRAIDQ6UW56 229 aa9.43□□□□□ -0.9
VRTN-202ENST00000557177 COX8CQ7Z4L0 72 aa9.43□□□□□ -0.9
VRTN-202ENST00000557177 SFT2D1Q8WV19 159 aa9.43□□□□□ -0.9
VRTN-202ENST00000557177 CHCHD7Q9BUK0 85 aa9.43□□□□□ -0.9
VRTN-202ENST00000557177 URGCP-MRPS24S4R325 110 aa9.43□□□□□ -0.9
VRTN-202ENST00000557177 PKHD1L1Q86WI1 4243 aa9.42□□□□□ -0.9
VRTN-202ENST00000557177 MAP1LC3B2A6NCE7 125 aa9.42□□□□□ -0.9
VRTN-202ENST00000557177 ARMS2P0C7Q2 107 aa9.42□□□□□ -0.9
VRTN-202ENST00000557177 FAM74A4Q5TZK3 123 aa9.42□□□□□ -0.9
VRTN-202ENST00000557177 SYT8Q8NBV8 401 aa9.42□□□□□ -0.9
VRTN-202ENST00000557177 ZC2HC1AQ96GY0 325 aa9.42□□□□□ -0.9
VRTN-202ENST00000557177 SFRP2Q96HF1 295 aa9.42□□□□□ -0.9
VRTN-202ENST00000557177 MAP1LC3BQ9GZQ8 125 aa9.42□□□□□ -0.9
VRTN-202ENST00000557177 KLK12Q9UKR0 248 aa9.42□□□□□ -0.9
VRTN-202ENST00000557177 FAM74A7A6NL05 159 aa9.41□□□□□ -0.9
VRTN-202ENST00000557177 M0R036 132 aa9.41□□□□□ -0.9
VRTN-202ENST00000557177 IFNA1P01562 189 aa9.41□□□□□ -0.9
VRTN-202ENST00000557177 UBE2G2P60604 165 aa9.41□□□□□ -0.9
VRTN-202ENST00000557177 SRSF3P84103 164 aaKnown RBP9.41□□□□□ -0.9
VRTN-202ENST00000557177 CIRBP-AS1Q8TBR5 109 aa9.41□□□□□ -0.9
VRTN-202ENST00000557177 HIST1H2BAQ96A08 127 aa9.41□□□□□ -0.9
VRTN-202ENST00000557177 A0A087WWL8 130 aa9.4□□□□□ -0.9
VRTN-202ENST00000557177 TRBV10-1A0A0K0K1A3 114 aa9.4□□□□□ -0.9
VRTN-202ENST00000557177 GRIFINA4D1Z8 144 aa9.4□□□□□ -0.9
VRTN-202ENST00000557177 SH2D1AO60880 128 aa9.4□□□□□ -0.9
VRTN-202ENST00000557177 ADCYAP1P18509 176 aa9.4□□□□□ -0.9
VRTN-202ENST00000557177 CCL20P78556 96 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms