RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 ELOBQ15370 118 aa9.8□□□□□ -0.84
SLIRP-207ENST00000556831 COX8CQ7Z4L0 72 aa9.8□□□□□ -0.84
SLIRP-207ENST00000556831 VSIG2Q96IQ7 327 aa9.8□□□□□ -0.84
SLIRP-207ENST00000556831 C9orf85Q96MD7 179 aa9.8□□□□□ -0.84
SLIRP-207ENST00000556831 NACAE9PAV3 2078 aa9.79□□□□□ -0.84
SLIRP-207ENST00000556831 A0A096LPF7 62 aa9.79□□□□□ -0.84
SLIRP-207ENST00000556831 IGKV3D-20A0A0C4DH25 116 aa9.79□□□□□ -0.84
SLIRP-207ENST00000556831 H3BVH4 76 aa9.79□□□□□ -0.84
SLIRP-207ENST00000556831 TTC32Q5I0X7 151 aa9.79□□□□□ -0.84
SLIRP-207ENST00000556831 PRR27Q6MZM9 219 aa9.79□□□□□ -0.84
SLIRP-207ENST00000556831 LINC00336Q6ZUF6 198 aa9.79□□□□□ -0.84
SLIRP-207ENST00000556831 IMMP2LQ96T52 175 aa9.79□□□□□ -0.84
SLIRP-207ENST00000556831 TMSB15BA0A087X1C1 80 aa9.78□□□□□ -0.84
SLIRP-207ENST00000556831 A8MWV9 139 aa9.78□□□□□ -0.84
SLIRP-207ENST00000556831 RNASE3P12724 160 aaKnown RBP9.78□□□□□ -0.84
SLIRP-207ENST00000556831 GYPEP15421 78 aa9.78□□□□□ -0.84
SLIRP-207ENST00000556831 NEGR1Q7Z3B1 354 aa9.78□□□□□ -0.84
SLIRP-207ENST00000556831 ZNRF2Q8NHG8 242 aa9.78□□□□□ -0.84
SLIRP-207ENST00000556831 PRADC1Q9BSG0 188 aa9.78□□□□□ -0.84
SLIRP-207ENST00000556831 IL36BQ9NZH7 164 aa9.78□□□□□ -0.84
SLIRP-207ENST00000556831 MRPS16Q9Y3D3 137 aaKnown RBP9.78□□□□□ -0.84
SLIRP-207ENST00000556831 PHLDA3Q9Y5J5 127 aa9.78□□□□□ -0.84
SLIRP-207ENST00000556831 TRAV9-1A0A075B6T8 112 aa9.77□□□□□ -0.85
SLIRP-207ENST00000556831 GRIFINA4D1Z8 144 aa9.77□□□□□ -0.85
SLIRP-207ENST00000556831 CRIP1P50238 77 aa9.77□□□□□ -0.85
SLIRP-207ENST00000556831 RHOHQ15669 191 aa9.77□□□□□ -0.85
SLIRP-207ENST00000556831 ADIRFQ15847 76 aa9.77□□□□□ -0.85
SLIRP-207ENST00000556831 ESRGQ1W209 222 aa9.77□□□□□ -0.85
SLIRP-207ENST00000556831 LINC01559Q495D7 138 aa9.77□□□□□ -0.85
SLIRP-207ENST00000556831 CFAP126Q5VTH2 177 aa9.77□□□□□ -0.85
SLIRP-207ENST00000556831 SH2D6Q7Z4S9 175 aa9.77□□□□□ -0.85
SLIRP-207ENST00000556831 C11orf52Q96A22 123 aa9.77□□□□□ -0.85
SLIRP-207ENST00000556831 PTH2Q96A98 100 aa9.77□□□□□ -0.85
SLIRP-207ENST00000556831 Q9H8V8 135 aa9.77□□□□□ -0.85
SLIRP-207ENST00000556831 PKD1P98161 4303 aa9.76□□□□□ -0.85
SLIRP-207ENST00000556831 NBDYA0A0U1RRE5 68 aa9.76□□□□□ -0.85
SLIRP-207ENST00000556831 PGPEP1LA6NFU8 196 aa9.76□□□□□ -0.85
SLIRP-207ENST00000556831 K7EQD1 137 aa9.76□□□□□ -0.85
SLIRP-207ENST00000556831 RS1O15537 224 aa9.76□□□□□ -0.85
SLIRP-207ENST00000556831 ARMS2P0C7Q2 107 aa9.76□□□□□ -0.85
SLIRP-207ENST00000556831 MGST1P10620 155 aaKnown RBP9.76□□□□□ -0.85
SLIRP-207ENST00000556831 GNG4P50150 75 aa9.76□□□□□ -0.85
SLIRP-207ENST00000556831 CENPWQ5EE01 88 aa9.76□□□□□ -0.85
SLIRP-207ENST00000556831 PIK3CD-AS1Q5SR53 167 aa9.76□□□□□ -0.85
SLIRP-207ENST00000556831 C1orf134Q5TEV5 83 aa9.76□□□□□ -0.85
SLIRP-207ENST00000556831 DAZAP1Q96EP5 407 aaKnown RBP9.76□□□□□ -0.85
SLIRP-207ENST00000556831 UPK3BQ9BT76 320 aa9.76□□□□□ -0.85
SLIRP-207ENST00000556831 PARLQ9H300 379 aa9.76□□□□□ -0.85
SLIRP-207ENST00000556831 LY96Q9Y6Y9 160 aa9.76□□□□□ -0.85
SLIRP-207ENST00000556831 IGHV3-73A0A0B4J1V6 119 aa9.75□□□□□ -0.85
SLIRP-207ENST00000556831 GATA1P15976 413 aaPredicted RBP9.75□□□□□ -0.85
SLIRP-207ENST00000556831 DNAH11Q96DT5 4516 aa9.74□□□□□ -0.85
SLIRP-207ENST00000556831 TRBV6-4A0A1B0GX49 114 aa9.74□□□□□ -0.85
SLIRP-207ENST00000556831 M0R381 172 aa9.74□□□□□ -0.85
SLIRP-207ENST00000556831 RHODO00212 210 aa9.74□□□□□ -0.85
SLIRP-207ENST00000556831 Q6ZR54 194 aa9.74□□□□□ -0.85
SLIRP-207ENST00000556831 SMIM12Q96EX1 92 aa9.74□□□□□ -0.85
SLIRP-207ENST00000556831 DERL1Q9BUN8 251 aa9.74□□□□□ -0.85
SLIRP-207ENST00000556831 DYNC1H1Q14204 4646 aaKnown RBP9.74□□□□□ -0.85
SLIRP-207ENST00000556831 PCP4L1A6NKN8 68 aa9.73□□□□□ -0.85
SLIRP-207ENST00000556831 SIVA1O15304 175 aa9.73□□□□□ -0.85
SLIRP-207ENST00000556831 NXPH4O95158 308 aa9.73□□□□□ -0.85
SLIRP-207ENST00000556831 NDUFA6P56556 154 aa9.73□□□□□ -0.85
SLIRP-207ENST00000556831 RPL23P62829 140 aaKnown RBP9.73□□□□□ -0.85
SLIRP-207ENST00000556831 FAM74A4Q5TZK3 123 aa9.73□□□□□ -0.85
SLIRP-207ENST00000556831 ZFP2Q6ZN57 461 aa9.73□□□□□ -0.85
SLIRP-207ENST00000556831 SLC25A29Q8N8R3 303 aa9.73□□□□□ -0.85
SLIRP-207ENST00000556831 MLST8Q9BVC4 326 aa9.73□□□□□ -0.85
SLIRP-207ENST00000556831 URGCP-MRPS24S4R325 110 aa9.73□□□□□ -0.85
SLIRP-207ENST00000556831 TGIF2-C20orf24A0A0A6YYL0 155 aa9.72□□□□□ -0.85
SLIRP-207ENST00000556831 A0A1W2PPQ1 181 aa9.72□□□□□ -0.85
SLIRP-207ENST00000556831 XKRY2A2RUG3 117 aa9.72□□□□□ -0.85
SLIRP-207ENST00000556831 PRSS29PA6NIE9 313 aa9.72□□□□□ -0.85
SLIRP-207ENST00000556831 CXCL1P09341 107 aa9.72□□□□□ -0.85
SLIRP-207ENST00000556831 MED14OSP0DP75 135 aa9.72□□□□□ -0.85
SLIRP-207ENST00000556831 COX19Q49B96 90 aa9.72□□□□□ -0.85
SLIRP-207ENST00000556831 LYPD5Q6UWN5 251 aa9.72□□□□□ -0.85
SLIRP-207ENST00000556831 C6orf223Q8N319 242 aa9.72□□□□□ -0.85
SLIRP-207ENST00000556831 TRAV9-2A0A087WT02 112 aa9.71□□□□□ -0.86
SLIRP-207ENST00000556831 HIST1H2BKO60814 126 aa9.71□□□□□ -0.86
SLIRP-207ENST00000556831 HIST1H2BJP06899 126 aa9.71□□□□□ -0.86
SLIRP-207ENST00000556831 HIST1H2BOP23527 126 aa9.71□□□□□ -0.86
SLIRP-207ENST00000556831 HIST1H2BBP33778 126 aa9.71□□□□□ -0.86
SLIRP-207ENST00000556831 HIST1H2BDP58876 126 aa9.71□□□□□ -0.86
SLIRP-207ENST00000556831 RPS20P60866 119 aaKnown RBP9.71□□□□□ -0.86
SLIRP-207ENST00000556831 HIST1H2BCP62807 126 aa9.71□□□□□ -0.86
SLIRP-207ENST00000556831 HIST2H2BEQ16778 126 aa9.71□□□□□ -0.86
SLIRP-207ENST00000556831 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.71□□□□□ -0.86
SLIRP-207ENST00000556831 SPANXN1Q5VSR9 72 aa9.71□□□□□ -0.86
SLIRP-207ENST00000556831 DMRTA1Q5VZB9 504 aa9.71□□□□□ -0.86
SLIRP-207ENST00000556831 HIST1H2BHQ93079 126 aa9.71□□□□□ -0.86
SLIRP-207ENST00000556831 HIST1H2BNQ99877 126 aa9.71□□□□□ -0.86
SLIRP-207ENST00000556831 HIST1H2BMQ99879 126 aa9.71□□□□□ -0.86
SLIRP-207ENST00000556831 NIT2Q9NQR4 276 aa9.71□□□□□ -0.86
SLIRP-207ENST00000556831 PKHD1P08F94 4074 aa9.71□□□□□ -0.86
SLIRP-207ENST00000556831 LOC100131303A0A0U1RQF7 123 aa9.7□□□□□ -0.86
SLIRP-207ENST00000556831 P01737 135 aa9.7□□□□□ -0.86
SLIRP-207ENST00000556831 COA6Q5JTJ3 125 aaKnown RBP9.7□□□□□ -0.86
SLIRP-207ENST00000556831 TPPP3Q9BW30 176 aa9.7□□□□□ -0.86
SLIRP-207ENST00000556831 RTL8CO15255 209 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms