RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 IGHV3-33P01772 117 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 ARMS2P0C7Q2 107 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 IGHV3-30-3P0DP02 117 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 IGHV3-30-5P0DP03 117 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 AKR1C3P42330 323 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 SSTP61278 116 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 HAMPP81172 84 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 GAGE1Q13065 139 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 GAGE4Q13068 117 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 GAGE5Q13069 117 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 MRPL23Q16540 153 aaKnown RBP4.31□□□□□ -1.72
TMEM260-209ENST00000556079 ZFP69Q49AA0 526 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 GAGE13Q4V321 117 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 UFSP1Q6NVU6 142 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 Q6ZNX1 250 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 NEGR1Q7Z3B1 354 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 ARL6IP6Q8N6S5 226 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 MBD3L1Q8WWY6 194 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 KCNS1Q96KK3 526 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 PARLQ9H300 379 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 SCRT2Q9NQ03 307 aa4.31□□□□□ -1.72
TMEM260-209ENST00000556079 A0A0D9SG52 128 aa4.3□□□□□ -1.72
TMEM260-209ENST00000556079 RAB19A4D1S5 217 aa4.3□□□□□ -1.72
TMEM260-209ENST00000556079 M0R381 172 aa4.3□□□□□ -1.72
TMEM260-209ENST00000556079 SEC11BP0C7V7 166 aa4.3□□□□□ -1.72
TMEM260-209ENST00000556079 GZMBP10144 247 aa4.3□□□□□ -1.72
TMEM260-209ENST00000556079 ASIPP42127 132 aa4.3□□□□□ -1.72
TMEM260-209ENST00000556079 NKX2-5P52952 324 aaPredicted RBP4.3□□□□□ -1.72
TMEM260-209ENST00000556079 UBE2G1P62253 170 aa4.3□□□□□ -1.72
TMEM260-209ENST00000556079 FAM74A4Q5TZK3 123 aa4.3□□□□□ -1.72
TMEM260-209ENST00000556079 PRR27Q6MZM9 219 aa4.3□□□□□ -1.72
TMEM260-209ENST00000556079 Q8N1X5 172 aa4.3□□□□□ -1.72
TMEM260-209ENST00000556079 OR10AG1Q8NH19 301 aa4.3□□□□□ -1.72
TMEM260-209ENST00000556079 PCNPQ8WW12 178 aaKnown RBP4.3□□□□□ -1.72
TMEM260-209ENST00000556079 GNG13Q9P2W3 67 aa4.3□□□□□ -1.72
TMEM260-209ENST00000556079 RBFOX3A6NFN3 312 aa4.29□□□□□ -1.72
TMEM260-209ENST00000556079 FABP5P3A8MUU1 101 aa4.29□□□□□ -1.72
TMEM260-209ENST00000556079 LINC00694P0DN24 101 aa4.29□□□□□ -1.72
TMEM260-209ENST00000556079 S100A4P26447 101 aaKnown RBP4.29□□□□□ -1.72
TMEM260-209ENST00000556079 PPT1P50897 306 aa4.29□□□□□ -1.72
TMEM260-209ENST00000556079 WFDC2Q14508 124 aa4.29□□□□□ -1.72
TMEM260-209ENST00000556079 ZNF674Q2M3X9 581 aa4.29□□□□□ -1.72
TMEM260-209ENST00000556079 TTC32Q5I0X7 151 aa4.29□□□□□ -1.72
TMEM260-209ENST00000556079 SAPCD1Q5SSQ6 148 aa4.29□□□□□ -1.72
TMEM260-209ENST00000556079 FAM162BQ5T6X4 162 aa4.29□□□□□ -1.72
TMEM260-209ENST00000556079 C9orf62Q8N4C0 152 aa4.29□□□□□ -1.72
TMEM260-209ENST00000556079 SYT8Q8NBV8 401 aa4.29□□□□□ -1.72
TMEM260-209ENST00000556079 STOML3Q8TAV4 291 aa4.29□□□□□ -1.72
TMEM260-209ENST00000556079 HIST1H2BAQ96A08 127 aa4.29□□□□□ -1.72
TMEM260-209ENST00000556079 FMC1Q96HJ9 113 aa4.29□□□□□ -1.72
TMEM260-209ENST00000556079 Q9HAA7 133 aa4.29□□□□□ -1.72
TMEM260-209ENST00000556079 FLG2Q5D862 2391 aaPredicted RBP4.28□□□□□ -1.72
TMEM260-209ENST00000556079 TRBV20OR9-2A0A075B6H5 130 aa4.28□□□□□ -1.72
TMEM260-209ENST00000556079 TRBV6-1A0A0K0K1D8 114 aa4.28□□□□□ -1.72
TMEM260-209ENST00000556079 IGLV2-8P01709 118 aa4.28□□□□□ -1.72
TMEM260-209ENST00000556079 CRYGDP07320 174 aa4.28□□□□□ -1.72
TMEM260-209ENST00000556079 TPT1P13693 172 aaKnown RBP4.28□□□□□ -1.72
TMEM260-209ENST00000556079 RPL35P42766 123 aaKnown RBP4.28□□□□□ -1.72
TMEM260-209ENST00000556079 CENPWQ5EE01 88 aa4.28□□□□□ -1.72
TMEM260-209ENST00000556079 COX8CQ7Z4L0 72 aa4.28□□□□□ -1.72
TMEM260-209ENST00000556079 BAGE2Q86Y30 109 aa4.28□□□□□ -1.72
TMEM260-209ENST00000556079 TCTE3Q8IZS6 198 aa4.28□□□□□ -1.72
TMEM260-209ENST00000556079 DEFB104AQ8WTQ1 72 aa4.28□□□□□ -1.72
TMEM260-209ENST00000556079 IL36BQ9NZH7 164 aa4.28□□□□□ -1.72
TMEM260-209ENST00000556079 MSRB1Q9NZV6 116 aa4.28□□□□□ -1.72
TMEM260-209ENST00000556079 PLA2G2DQ9UNK4 145 aa4.28□□□□□ -1.72
TMEM260-209ENST00000556079 LY96Q9Y6Y9 160 aa4.28□□□□□ -1.72
TMEM260-209ENST00000556079 FAT3Q8TDW7 4589 aa4.28□□□□□ -1.73
TMEM260-209ENST00000556079 LRP1Q07954 4544 aaKnown RBP4.27□□□□□ -1.73
TMEM260-209ENST00000556079 A0A087WTM6 91 aa4.27□□□□□ -1.73
TMEM260-209ENST00000556079 IGHV3-38A0A0C4DH36 116 aa4.27□□□□□ -1.73
TMEM260-209ENST00000556079 TRBV6-4A0A1B0GX49 114 aa4.27□□□□□ -1.73
TMEM260-209ENST00000556079 A0A1W2PPQ1 181 aa4.27□□□□□ -1.73
TMEM260-209ENST00000556079 UMAD1C9J7I0 102 aa4.27□□□□□ -1.73
TMEM260-209ENST00000556079 TEX46H3BTG2 121 aa4.27□□□□□ -1.73
TMEM260-209ENST00000556079 LECT2O14960 151 aa4.27□□□□□ -1.73
TMEM260-209ENST00000556079 SULT1A2P50226 295 aa4.27□□□□□ -1.73
TMEM260-209ENST00000556079 KRTAP10-1P60331 282 aa4.27□□□□□ -1.73
TMEM260-209ENST00000556079 SLAQ13239 276 aa4.27□□□□□ -1.73
TMEM260-209ENST00000556079 RHOHQ15669 191 aa4.27□□□□□ -1.73
TMEM260-209ENST00000556079 OR10J3Q5JRS4 329 aa4.27□□□□□ -1.73
TMEM260-209ENST00000556079 ALKAL2Q6UX46 152 aa4.27□□□□□ -1.73
TMEM260-209ENST00000556079 DAZ4Q86SG3 579 aaKnown RBP4.27□□□□□ -1.73
TMEM260-209ENST00000556079 ATP6V0E2Q8NHE4 81 aa4.27□□□□□ -1.73
TMEM260-209ENST00000556079 TXNDC17Q9BRA2 123 aa4.27□□□□□ -1.73
TMEM260-209ENST00000556079 MLST8Q9BVC4 326 aa4.27□□□□□ -1.73
TMEM260-209ENST00000556079 DAZ3Q9NR90 486 aaKnown RBP4.27□□□□□ -1.73
TMEM260-209ENST00000556079 ZFP30Q9Y2G7 519 aa4.27□□□□□ -1.73
TMEM260-209ENST00000556079 MGST1P10620 155 aaKnown RBP4.26□□□□□ -1.73
TMEM260-209ENST00000556079 DNLZQ5SXM8 178 aa4.26□□□□□ -1.73
TMEM260-209ENST00000556079 AKAP14Q86UN6 197 aa4.26□□□□□ -1.73
TMEM260-209ENST00000556079 C11orf52Q96A22 123 aa4.26□□□□□ -1.73
TMEM260-209ENST00000556079 PTH2Q96A98 100 aa4.26□□□□□ -1.73
TMEM260-209ENST00000556079 SFRP2Q96HF1 295 aa4.26□□□□□ -1.73
TMEM260-209ENST00000556079 PRADC1Q9BSG0 188 aa4.26□□□□□ -1.73
TMEM260-209ENST00000556079 TPPP3Q9BW30 176 aa4.26□□□□□ -1.73
TMEM260-209ENST00000556079 KRTAP4-2Q9BYR5 136 aa4.26□□□□□ -1.73
TMEM260-209ENST00000556079 NKX6-2Q9C056 277 aaPredicted RBP4.26□□□□□ -1.73
TMEM260-209ENST00000556079 PHLDA3Q9Y5J5 127 aa4.26□□□□□ -1.73
TMEM260-209ENST00000556079 TRAV1-1A0A0B4J248 108 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms