RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 RGS21Q2M5E4 152 aa8.45□□□□□ -1.06
HNRNPC-221ENST00000555883 GAGE13Q4V321 117 aa8.45□□□□□ -1.06
HNRNPC-221ENST00000555883 OR11H4Q8NGC9 324 aa8.45□□□□□ -1.06
HNRNPC-221ENST00000555883 SFRP2Q96HF1 295 aa8.45□□□□□ -1.06
HNRNPC-221ENST00000555883 SRRM2Q9UQ35 2752 aaKnown RBP8.45□□□□□ -1.06
HNRNPC-221ENST00000555883 TRBV10-1A0A0K0K1A3 114 aa8.44□□□□□ -1.06
HNRNPC-221ENST00000555883 ARPC5O15511 151 aa8.44□□□□□ -1.06
HNRNPC-221ENST00000555883 S100A9P06702 114 aaKnown RBP8.44□□□□□ -1.06
HNRNPC-221ENST00000555883 INAFM2P0DMQ5 153 aa8.44□□□□□ -1.06
HNRNPC-221ENST00000555883 CHCHD7Q9BUK0 85 aa8.44□□□□□ -1.06
HNRNPC-221ENST00000555883 SAMD10Q9BYL1 202 aa8.44□□□□□ -1.06
HNRNPC-221ENST00000555883 JPT2Q9H910 190 aa8.44□□□□□ -1.06
HNRNPC-221ENST00000555883 PHLDA3Q9Y5J5 127 aa8.44□□□□□ -1.06
HNRNPC-221ENST00000555883 UMAD1C9J7I0 102 aa8.43□□□□□ -1.06
HNRNPC-221ENST00000555883 FAM229AH3BQW9 127 aa8.43□□□□□ -1.06
HNRNPC-221ENST00000555883 M0R036 132 aa8.43□□□□□ -1.06
HNRNPC-221ENST00000555883 CXCL1P09341 107 aa8.43□□□□□ -1.06
HNRNPC-221ENST00000555883 TPT1P13693 172 aaKnown RBP8.43□□□□□ -1.06
HNRNPC-221ENST00000555883 ZFP82Q8N141 532 aa8.43□□□□□ -1.06
HNRNPC-221ENST00000555883 C14orf178Q8N769 122 aaPredicted RBP8.43□□□□□ -1.06
HNRNPC-221ENST00000555883 Q6ZSA8 131 aa8.42□□□□□ -1.06
HNRNPC-221ENST00000555883 NIT1Q86X76 327 aa8.42□□□□□ -1.06
HNRNPC-221ENST00000555883 KCNRGQ8N5I3 272 aa8.42□□□□□ -1.06
HNRNPC-221ENST00000555883 MBD3L1Q8WWY6 194 aa8.42□□□□□ -1.06
HNRNPC-221ENST00000555883 Q9UF83 564 aa8.42□□□□□ -1.06
HNRNPC-221ENST00000555883 MYCBP2O75592 4640 aa8.42□□□□□ -1.06
HNRNPC-221ENST00000555883 GRIFINA4D1Z8 144 aa8.41□□□□□ -1.06
HNRNPC-221ENST00000555883 HMSDA8MTL9 139 aa8.41□□□□□ -1.06
HNRNPC-221ENST00000555883 AKR1C3P42330 323 aa8.41□□□□□ -1.06
HNRNPC-221ENST00000555883 FAM74A4Q5TZK3 123 aa8.41□□□□□ -1.06
HNRNPC-221ENST00000555883 CST9LP1Q5W188 147 aa8.41□□□□□ -1.06
HNRNPC-221ENST00000555883 DAZ4Q86SG3 579 aaKnown RBP8.41□□□□□ -1.06
HNRNPC-221ENST00000555883 Q8N3U1 123 aa8.41□□□□□ -1.06
HNRNPC-221ENST00000555883 OR10G8Q8NGN5 311 aa8.41□□□□□ -1.06
HNRNPC-221ENST00000555883 RMI2Q96E14 147 aa8.41□□□□□ -1.06
HNRNPC-221ENST00000555883 DAZ3Q9NR90 486 aaKnown RBP8.41□□□□□ -1.06
HNRNPC-221ENST00000555883 URGCP-MRPS24S4R325 110 aa8.41□□□□□ -1.06
HNRNPC-221ENST00000555883 TRBV7-3A0A075B6L6 115 aa8.4□□□□□ -1.06
HNRNPC-221ENST00000555883 M0R381 172 aa8.4□□□□□ -1.06
HNRNPC-221ENST00000555883 PAGE4O60829 102 aa8.4□□□□□ -1.06
HNRNPC-221ENST00000555883 RPL36AP83881 106 aaKnown RBP8.4□□□□□ -1.06
HNRNPC-221ENST00000555883 ELOBQ15370 118 aa8.4□□□□□ -1.06
HNRNPC-221ENST00000555883 ATRAIDQ6UW56 229 aa8.4□□□□□ -1.06
HNRNPC-221ENST00000555883 RPL36ALQ969Q0 106 aaKnown RBP8.4□□□□□ -1.06
HNRNPC-221ENST00000555883 MLST8Q9BVC4 326 aa8.4□□□□□ -1.06
HNRNPC-221ENST00000555883 A0A087WWL8 130 aa8.39□□□□□ -1.07
HNRNPC-221ENST00000555883 A0A0D9SG52 128 aa8.39□□□□□ -1.07
HNRNPC-221ENST00000555883 SMR3BP02814 79 aaPredicted RBP8.39□□□□□ -1.07
HNRNPC-221ENST00000555883 RAB4BP61018 213 aa8.39□□□□□ -1.07
HNRNPC-221ENST00000555883 UBE2D3P61077 147 aa8.39□□□□□ -1.07
HNRNPC-221ENST00000555883 UBE2D2P62837 147 aa8.39□□□□□ -1.07
HNRNPC-221ENST00000555883 WFDC2Q14508 124 aa8.39□□□□□ -1.07
HNRNPC-221ENST00000555883 SFT2D1Q8WV19 159 aa8.39□□□□□ -1.07
HNRNPC-221ENST00000555883 SSBP4Q9BWG4 385 aaPredicted RBP8.39□□□□□ -1.07
HNRNPC-221ENST00000555883 DMBT1Q9UGM3 2413 aaPredicted RBP8.39□□□□□ -1.07
HNRNPC-221ENST00000555883 SNAI2O43623 268 aa8.38□□□□□ -1.07
HNRNPC-221ENST00000555883 PFDN1O60925 122 aa8.38□□□□□ -1.07
HNRNPC-221ENST00000555883 OR5AL1P0C617 328 aa8.38□□□□□ -1.07
HNRNPC-221ENST00000555883 EIF5AP63241 154 aaKnown RBP8.38□□□□□ -1.07
HNRNPC-221ENST00000555883 LCE2CQ5TA81 110 aa8.38□□□□□ -1.07
HNRNPC-221ENST00000555883 PRR27Q6MZM9 219 aa8.38□□□□□ -1.07
HNRNPC-221ENST00000555883 FAM30AQ9NZY2 134 aa8.38□□□□□ -1.07
HNRNPC-221ENST00000555883 DNAH8Q96JB1 4490 aa8.38□□□□□ -1.07
HNRNPC-221ENST00000555883 A0A087WX48 190 aa8.37□□□□□ -1.07
HNRNPC-221ENST00000555883 TMSB15BA0A087X1C1 80 aa8.37□□□□□ -1.07
HNRNPC-221ENST00000555883 BCL2L11O43521 198 aa8.37□□□□□ -1.07
HNRNPC-221ENST00000555883 Q0VG73 95 aa8.37□□□□□ -1.07
HNRNPC-221ENST00000555883 Q8N976 141 aa8.37□□□□□ -1.07
HNRNPC-221ENST00000555883 FAM213BQ8TBF2 198 aa8.37□□□□□ -1.07
HNRNPC-221ENST00000555883 TRBV6-8A0A0A6YYG3 113 aa8.36□□□□□ -1.07
HNRNPC-221ENST00000555883 SCO2A0A1W2PP80 73 aa8.36□□□□□ -1.07
HNRNPC-221ENST00000555883 KANTRA0A1W2PQU2 76 aa8.36□□□□□ -1.07
HNRNPC-221ENST00000555883 SMLR1H3BR10 107 aa8.36□□□□□ -1.07
HNRNPC-221ENST00000555883 H2AFB1P0C5Y9 115 aa8.36□□□□□ -1.07
HNRNPC-221ENST00000555883 PKIAP61925 76 aa8.36□□□□□ -1.07
HNRNPC-221ENST00000555883 KCNIP4Q6PIL6 250 aa8.36□□□□□ -1.07
HNRNPC-221ENST00000555883 BAGE2Q86Y30 109 aa8.36□□□□□ -1.07
HNRNPC-221ENST00000555883 ZNF471Q9BX82 626 aaPredicted RBP8.36□□□□□ -1.07
HNRNPC-221ENST00000555883 KLK12Q9UKR0 248 aa8.36□□□□□ -1.07
HNRNPC-221ENST00000555883 TMEM97Q5BJF2 176 aa8.35□□□□□ -1.07
HNRNPC-221ENST00000555883 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.35□□□□□ -1.07
HNRNPC-221ENST00000555883 OR10AG1Q8NH19 301 aa8.35□□□□□ -1.07
HNRNPC-221ENST00000555883 BAALCQ8WXS3 180 aa8.35□□□□□ -1.07
HNRNPC-221ENST00000555883 IGKV2D-24A0A075B6R9 120 aa8.34□□□□□ -1.07
HNRNPC-221ENST00000555883 TRAV1-1A0A0B4J248 108 aa8.34□□□□□ -1.07
HNRNPC-221ENST00000555883 LECT2O14960 151 aa8.34□□□□□ -1.07
HNRNPC-221ENST00000555883 HAMPP81172 84 aa8.34□□□□□ -1.07
HNRNPC-221ENST00000555883 TMUB2Q71RG4 321 aa8.34□□□□□ -1.07
HNRNPC-221ENST00000555883 NEXN-AS1Q8NBZ9 246 aa8.34□□□□□ -1.07
HNRNPC-221ENST00000555883 C11orf52Q96A22 123 aa8.34□□□□□ -1.07
HNRNPC-221ENST00000555883 MANBALQ9NQG1 85 aa8.34□□□□□ -1.07
HNRNPC-221ENST00000555883 VAX2Q9UIW0 290 aa8.34□□□□□ -1.07
HNRNPC-221ENST00000555883 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.33□□□□□ -1.08
HNRNPC-221ENST00000555883 RBFOX3A6NFN3 312 aa8.33□□□□□ -1.08
HNRNPC-221ENST00000555883 PLA2G1BP04054 148 aaKnown RBP8.33□□□□□ -1.08
HNRNPC-221ENST00000555883 RAB5CP51148 216 aa8.33□□□□□ -1.08
HNRNPC-221ENST00000555883 RPL19P84098 196 aaKnown RBP8.33□□□□□ -1.08
HNRNPC-221ENST00000555883 ZNF56Q15929 161 aa8.33□□□□□ -1.08
HNRNPC-221ENST00000555883 C14orf177Q52M58 125 aa8.33□□□□□ -1.08
HNRNPC-221ENST00000555883 SPANXN1Q5VSR9 72 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms