RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 NEXN-AS1Q8NBZ9 246 aa10.14□□□□□ -0.79
SIX1-203ENST00000554986 SPANXA1Q9NS26 97 aa10.14□□□□□ -0.79
SIX1-203ENST00000554986 A8MWV9 139 aa10.14□□□□□ -0.79
SIX1-203ENST00000554986 PSMB2P49721 201 aa10.14□□□□□ -0.79
SIX1-203ENST00000554986 MFAP4P55083 255 aa10.14□□□□□ -0.79
SIX1-203ENST00000554986 ORMDL2Q53FV1 153 aa10.14□□□□□ -0.79
SIX1-203ENST00000554986 Q8TAT8 98 aa10.14□□□□□ -0.79
SIX1-203ENST00000554986 GLMPQ8WWB7 406 aa10.14□□□□□ -0.79
SIX1-203ENST00000554986 TOMM6Q96B49 74 aa10.14□□□□□ -0.79
SIX1-203ENST00000554986 ASIPP42127 132 aa10.13□□□□□ -0.79
SIX1-203ENST00000554986 PRSS29PA6NIE9 313 aa10.12□□□□□ -0.79
SIX1-203ENST00000554986 Q6YL49 198 aa10.12□□□□□ -0.79
SIX1-203ENST00000554986 SMIM2Q9BVW6 85 aa10.12□□□□□ -0.79
SIX1-203ENST00000554986 ESM1Q9NQ30 184 aa10.12□□□□□ -0.79
SIX1-203ENST00000554986 IGHV4-59P01825 116 aa10.12□□□□□ -0.79
SIX1-203ENST00000554986 ERCC8Q13216 396 aa10.12□□□□□ -0.79
SIX1-203ENST00000554986 DUX5Q96PT3 197 aa10.12□□□□□ -0.79
SIX1-203ENST00000554986 IGLV11-55A0A075B6I3 123 aa10.11□□□□□ -0.79
SIX1-203ENST00000554986 RHODO00212 210 aa10.11□□□□□ -0.79
SIX1-203ENST00000554986 TIMM23O14925 209 aa10.11□□□□□ -0.79
SIX1-203ENST00000554986 PRB4P10163 310 aaPredicted RBP10.11□□□□□ -0.79
SIX1-203ENST00000554986 Q6Q795 121 aa10.11□□□□□ -0.79
SIX1-203ENST00000554986 NDUFA11Q86Y39 141 aa10.11□□□□□ -0.79
SIX1-203ENST00000554986 CFHR4Q92496 578 aa10.11□□□□□ -0.79
SIX1-203ENST00000554986 LINC01600Q96MT4 127 aa10.11□□□□□ -0.79
SIX1-203ENST00000554986 SLC50A1Q9BRV3 221 aa10.11□□□□□ -0.79
SIX1-203ENST00000554986 PRADC1Q9BSG0 188 aa10.11□□□□□ -0.79
SIX1-203ENST00000554986 SMAD5-AS1Q9Y6J3 95 aa10.11□□□□□ -0.79
SIX1-203ENST00000554986 LOC107984156A0A0G2JMH3 177 aa10.1□□□□□ -0.79
SIX1-203ENST00000554986 OOSP1A8MZH6 123 aa10.1□□□□□ -0.79
SIX1-203ENST00000554986 H3BUX3 64 aa10.1□□□□□ -0.79
SIX1-203ENST00000554986 SCGB2A1O75556 95 aa10.1□□□□□ -0.79
SIX1-203ENST00000554986 CNIH1O95406 144 aa10.1□□□□□ -0.79
SIX1-203ENST00000554986 TRGV3P03979 118 aa10.1□□□□□ -0.79
SIX1-203ENST00000554986 ZFP2Q6ZN57 461 aa10.1□□□□□ -0.79
SIX1-203ENST00000554986 ARL17AQ8IVW1 177 aa10.1□□□□□ -0.79
SIX1-203ENST00000554986 SS18L2Q9UHA2 77 aa10.1□□□□□ -0.79
SIX1-203ENST00000554986 JMJD1CQ15652 2540 aa10.1□□□□□ -0.79
SIX1-203ENST00000554986 IGKV3D-20A0A0C4DH25 116 aa10.1□□□□□ -0.79
SIX1-203ENST00000554986 IGHV7-4-1A0A0J9YVY3 117 aa10.1□□□□□ -0.79
SIX1-203ENST00000554986 ZNF815PA8K554 130 aa10.1□□□□□ -0.79
SIX1-203ENST00000554986 F8W735 103 aaPredicted RBP10.1□□□□□ -0.79
SIX1-203ENST00000554986 TCL1BO95988 128 aa10.1□□□□□ -0.79
SIX1-203ENST00000554986 NHLRC4P0CG21 123 aaPredicted RBP10.1□□□□□ -0.79
SIX1-203ENST00000554986 SCGB3A1Q96QR1 104 aa10.1□□□□□ -0.79
SIX1-203ENST00000554986 DNAJC9-AS1A6NH13 148 aa10.09□□□□□ -0.79
SIX1-203ENST00000554986 HILS1P60008 231 aa10.09□□□□□ -0.79
SIX1-203ENST00000554986 PTH2Q96A98 100 aa10.09□□□□□ -0.79
SIX1-203ENST00000554986 FANCD2OSQ96PS1 177 aa10.09□□□□□ -0.79
SIX1-203ENST00000554986 FAM110AQ9BQ89 295 aa10.09□□□□□ -0.79
SIX1-203ENST00000554986 SRSF9Q13242 221 aaKnown RBP eCLIP10.08□□□□□ -0.8
SIX1-203ENST00000554986 LY6EQ16553 131 aa10.08□□□□□ -0.8
SIX1-203ENST00000554986 PAPPA-AS1Q5QFB9 102 aa10.08□□□□□ -0.8
SIX1-203ENST00000554986 SCGB1D4Q6XE38 83 aa10.08□□□□□ -0.8
SIX1-203ENST00000554986 C10orf126Q8N4M7 172 aa10.08□□□□□ -0.8
SIX1-203ENST00000554986 ANKRD29Q8N6D5 301 aa10.08□□□□□ -0.8
SIX1-203ENST00000554986 NPBQ8NG41 125 aa10.08□□□□□ -0.8
SIX1-203ENST00000554986 C21orf62Q9NYP8 219 aa10.08□□□□□ -0.8
SIX1-203ENST00000554986 UFC1Q9Y3C8 167 aa10.08□□□□□ -0.8
SIX1-203ENST00000554986 PRIMA1Q86XR5 153 aa10.07□□□□□ -0.8
SIX1-203ENST00000554986 TMEM219Q86XT9 240 aa10.07□□□□□ -0.8
SIX1-203ENST00000554986 BAALCQ8WXS3 180 aa10.07□□□□□ -0.8
SIX1-203ENST00000554986 MRPL53Q96EL3 112 aaKnown RBP10.07□□□□□ -0.8
SIX1-203ENST00000554986 A0A0J9YY99 117 aa10.06□□□□□ -0.8
SIX1-203ENST00000554986 NBR2O15453 112 aa10.06□□□□□ -0.8
SIX1-203ENST00000554986 RASL10AQ92737 203 aa10.06□□□□□ -0.8
SIX1-203ENST00000554986 PLEKHB2Q96CS7 222 aa10.06□□□□□ -0.8
SIX1-203ENST00000554986 C11orf21Q9P2W6 132 aa10.06□□□□□ -0.8
SIX1-203ENST00000554986 A6NDX4 124 aa10.06□□□□□ -0.8
SIX1-203ENST00000554986 M0R381 172 aa10.06□□□□□ -0.8
SIX1-203ENST00000554986 NDUFV3P56181 108 aaKnown RBP10.06□□□□□ -0.8
SIX1-203ENST00000554986 TMEM86BQ8N661 226 aa10.06□□□□□ -0.8
SIX1-203ENST00000554986 RAX2Q96IS3 184 aa10.06□□□□□ -0.8
SIX1-203ENST00000554986 VPREB3Q9UKI3 123 aa10.06□□□□□ -0.8
SIX1-203ENST00000554986 GAGE12JA6NER3 117 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 B5MCH6 92 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 GAGE7O76087 117 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 GAGE12FP0CL80 117 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 GAGE12GP0CL81 117 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 GAGE12IP0CL82 117 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 SCGB1C2P0DMR2 95 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 HLA-DMBP28068 263 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 HERVK_113P61574 105 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 SUMO2P61956 95 aaKnown RBP10.05□□□□□ -0.8
SIX1-203ENST00000554986 GAGE2BQ13066 116 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 GAGE4Q13068 117 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 EBI3Q14213 229 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 HES1Q14469 280 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 GAGE2EQ4V326 116 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 GAGE2DQ9UEU5 116 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 TRAV26-2A0A0B4J265 109 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 IGHV3-30P01768 117 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 CFC1BP0CG36 223 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 CFC1P0CG37 223 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 IGHV3-30-5P0DP03 117 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 TMEM95Q3KNT9 176 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 Q8N6K4 173 aa10.05□□□□□ -0.8
SIX1-203ENST00000554986 TRBV7-9A0A0J9YWB2 115 aa10.04□□□□□ -0.8
SIX1-203ENST00000554986 LINC01548A6NM66 108 aa10.04□□□□□ -0.8
SIX1-203ENST00000554986 SPANXN1Q5VSR9 72 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms