RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 ZNF295-AS1Q8N0V1 137 aa11.82□□□□□ -0.52
ARHGEF40-202ENST00000553709 CRLF1O75462 422 aa11.82□□□□□ -0.52
ARHGEF40-202ENST00000553709 SLC25A29Q8N8R3 303 aa11.82□□□□□ -0.52
ARHGEF40-202ENST00000553709 PRSS47A8MTI9 375 aa11.82□□□□□ -0.52
ARHGEF40-202ENST00000553709 LINC00574Q9H8X3 128 aa11.82□□□□□ -0.52
ARHGEF40-202ENST00000553709 FANCD2OSQ96PS1 177 aa11.81□□□□□ -0.52
ARHGEF40-202ENST00000553709 ANKHD1Q8IWZ3 2542 aaKnown RBP11.81□□□□□ -0.52
ARHGEF40-202ENST00000553709 A0A0J9YXV3 536 aa11.81□□□□□ -0.52
ARHGEF40-202ENST00000553709 K7EMT4 169 aa11.81□□□□□ -0.52
ARHGEF40-202ENST00000553709 TRAV12-1A0A0B4J245 112 aa11.81□□□□□ -0.52
ARHGEF40-202ENST00000553709 CDK2AP2O75956 126 aa11.81□□□□□ -0.52
ARHGEF40-202ENST00000553709 IFITM1P13164 125 aa11.81□□□□□ -0.52
ARHGEF40-202ENST00000553709 XCL1P47992 114 aa11.81□□□□□ -0.52
ARHGEF40-202ENST00000553709 FBXL19-AS1Q494R0 122 aa11.81□□□□□ -0.52
ARHGEF40-202ENST00000553709 SIRPDQ9H106 197 aa11.81□□□□□ -0.52
ARHGEF40-202ENST00000553709 PTPRQQ9UMZ3 2332 aa11.81□□□□□ -0.52
ARHGEF40-202ENST00000553709 HERV-K104P63124 156 aa11.8□□□□□ -0.52
ARHGEF40-202ENST00000553709 DAZAP2Q15038 168 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF40-202ENST00000553709 Q8N1Y9 231 aa11.8□□□□□ -0.52
ARHGEF40-202ENST00000553709 SPANXDQ9BXN6 97 aa11.8□□□□□ -0.52
ARHGEF40-202ENST00000553709 CENPFP49454 3210 aa11.79□□□□□ -0.52
ARHGEF40-202ENST00000553709 MED14OSP0DP75 135 aa11.79□□□□□ -0.52
ARHGEF40-202ENST00000553709 HIGD1BQ9P298 99 aa11.79□□□□□ -0.52
ARHGEF40-202ENST00000553709 CHD3Q12873 2000 aaKnown RBP11.79□□□□□ -0.52
ARHGEF40-202ENST00000553709 IGHV4OR15-8A0A075B7B6 117 aa11.79□□□□□ -0.52
ARHGEF40-202ENST00000553709 A0A087WW49 117 aa11.79□□□□□ -0.52
ARHGEF40-202ENST00000553709 PLA2G5P39877 138 aa11.79□□□□□ -0.52
ARHGEF40-202ENST00000553709 TTTY13Q9BZ97 58 aa11.79□□□□□ -0.52
ARHGEF40-202ENST00000553709 IGHG2P01859 326 aa11.78□□□□□ -0.52
ARHGEF40-202ENST00000553709 FXYD2P54710 66 aa11.78□□□□□ -0.52
ARHGEF40-202ENST00000553709 Q8NA96 180 aa11.78□□□□□ -0.52
ARHGEF40-202ENST00000553709 TOMM6Q96B49 74 aa11.78□□□□□ -0.52
ARHGEF40-202ENST00000553709 RPL39P62891 51 aaKnown RBP11.78□□□□□ -0.52
ARHGEF40-202ENST00000553709 HAMPP81172 84 aa11.78□□□□□ -0.52
ARHGEF40-202ENST00000553709 SMIM20Q8N5G0 67 aa11.78□□□□□ -0.52
ARHGEF40-202ENST00000553709 SPG11Q96JI7 2443 aa11.78□□□□□ -0.52
ARHGEF40-202ENST00000553709 A0A0J9YY99 117 aa11.78□□□□□ -0.52
ARHGEF40-202ENST00000553709 IGHG4P01861 327 aa11.78□□□□□ -0.52
ARHGEF40-202ENST00000553709 GPHB5Q86YW7 130 aa11.78□□□□□ -0.52
ARHGEF40-202ENST00000553709 IGLV2-8P01709 118 aa11.77□□□□□ -0.52
ARHGEF40-202ENST00000553709 RPL32P62910 135 aaKnown RBP11.77□□□□□ -0.52
ARHGEF40-202ENST00000553709 C2orf70A6NJV1 201 aa11.77□□□□□ -0.53
ARHGEF40-202ENST00000553709 K7EQD1 137 aa11.77□□□□□ -0.53
ARHGEF40-202ENST00000553709 ARHGAP21Q5T5U3 1957 aa11.77□□□□□ -0.53
ARHGEF40-202ENST00000553709 COL5A1P20908 1838 aaPredicted RBP11.77□□□□□ -0.53
ARHGEF40-202ENST00000553709 A0A1B0GXF2 115 aa11.77□□□□□ -0.53
ARHGEF40-202ENST00000553709 BAALCQ8WXS3 180 aa11.77□□□□□ -0.53
ARHGEF40-202ENST00000553709 C16orf74Q96GX8 76 aa11.77□□□□□ -0.53
ARHGEF40-202ENST00000553709 TEX48A0A1B0GUV7 120 aa11.76□□□□□ -0.53
ARHGEF40-202ENST00000553709 A4D1N5 150 aa11.76□□□□□ -0.53
ARHGEF40-202ENST00000553709 SH2D6Q7Z4S9 175 aa11.76□□□□□ -0.53
ARHGEF40-202ENST00000553709 MUSTN1Q8IVN3 82 aa11.76□□□□□ -0.53
ARHGEF40-202ENST00000553709 ACACBO00763 2458 aa11.76□□□□□ -0.53
ARHGEF40-202ENST00000553709 EIF4EBP1Q13541 118 aaPredicted RBP11.76□□□□□ -0.53
ARHGEF40-202ENST00000553709 DEFB1P60022 68 aa11.76□□□□□ -0.53
ARHGEF40-202ENST00000553709 ANKRD29Q8N6D5 301 aa11.76□□□□□ -0.53
ARHGEF40-202ENST00000553709 C15orf53Q8NAA6 179 aa11.76□□□□□ -0.53
ARHGEF40-202ENST00000553709 DSCR8Q96T75 97 aa11.76□□□□□ -0.53
ARHGEF40-202ENST00000553709 TMEM126AQ9H061 195 aa11.76□□□□□ -0.53
ARHGEF40-202ENST00000553709 TNRC6AQ8NDV7 1962 aaKnown RBP11.76□□□□□ -0.53
ARHGEF40-202ENST00000553709 C5orf38Q86SI9 138 aa11.76□□□□□ -0.53
ARHGEF40-202ENST00000553709 DAZ2Q13117 558 aaKnown RBP11.75□□□□□ -0.53
ARHGEF40-202ENST00000553709 DAZ4Q86SG3 579 aaKnown RBP11.75□□□□□ -0.53
ARHGEF40-202ENST00000553709 TIMM17AQ99595 171 aa11.75□□□□□ -0.53
ARHGEF40-202ENST00000553709 DAZ3Q9NR90 486 aaKnown RBP11.75□□□□□ -0.53
ARHGEF40-202ENST00000553709 TRAV25A0A0B4J276 109 aa11.75□□□□□ -0.53
ARHGEF40-202ENST00000553709 TINCRA0A1B0GVN0 87 aa11.75□□□□□ -0.53
ARHGEF40-202ENST00000553709 TAX1BP3O14907 124 aa11.75□□□□□ -0.53
ARHGEF40-202ENST00000553709 ODF1Q14990 250 aa11.75□□□□□ -0.53
ARHGEF40-202ENST00000553709 C1orf229Q6ZS94 237 aaPredicted RBP11.75□□□□□ -0.53
ARHGEF40-202ENST00000553709 BAALC-AS2P0C853 105 aa11.75□□□□□ -0.53
ARHGEF40-202ENST00000553709 Q6ZQT7 251 aa11.75□□□□□ -0.53
ARHGEF40-202ENST00000553709 UNQ9165/PRO28630Q6UXU0 137 aa11.75□□□□□ -0.53
ARHGEF40-202ENST00000553709 TMEM89A2RUT3 159 aa11.74□□□□□ -0.53
ARHGEF40-202ENST00000553709 E9PLD3 99 aa11.74□□□□□ -0.53
ARHGEF40-202ENST00000553709 NRGNQ92686 78 aa11.74□□□□□ -0.53
ARHGEF40-202ENST00000553709 ZMAT4Q9H898 229 aa11.74□□□□□ -0.53
ARHGEF40-202ENST00000553709 LINC00322Q6ZN03 302 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF40-202ENST00000553709 RMI2Q96E14 147 aa11.74□□□□□ -0.53
ARHGEF40-202ENST00000553709 HTTP42858 3142 aa11.73□□□□□ -0.53
ARHGEF40-202ENST00000553709 RBMY1FQ15415 496 aaKnown RBP11.73□□□□□ -0.53
ARHGEF40-202ENST00000553709 ODF3BA8MYP8 253 aa11.73□□□□□ -0.53
ARHGEF40-202ENST00000553709 TRBV12-3P01733 135 aa11.73□□□□□ -0.53
ARHGEF40-202ENST00000553709 GYPEP15421 78 aa11.72□□□□□ -0.53
ARHGEF40-202ENST00000553709 ATP6V0E2Q8NHE4 81 aa11.72□□□□□ -0.53
ARHGEF40-202ENST00000553709 EML5Q05BV3 1969 aa11.72□□□□□ -0.53
ARHGEF40-202ENST00000553709 ZNF80P51504 273 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF40-202ENST00000553709 CCDC140Q96MF4 163 aa11.72□□□□□ -0.53
ARHGEF40-202ENST00000553709 ORMDL1Q9P0S3 153 aa11.72□□□□□ -0.53
ARHGEF40-202ENST00000553709 TRAV4A0A0B4J268 109 aa11.71□□□□□ -0.53
ARHGEF40-202ENST00000553709 C11orf86A6NJI1 115 aa11.71□□□□□ -0.53
ARHGEF40-202ENST00000553709 MLST8Q9BVC4 326 aa11.71□□□□□ -0.53
ARHGEF40-202ENST00000553709 ICOSQ9Y6W8 199 aa11.71□□□□□ -0.53
ARHGEF40-202ENST00000553709 CRYBA4P53673 196 aa11.71□□□□□ -0.53
ARHGEF40-202ENST00000553709 SPATA12Q7Z6I5 190 aa11.71□□□□□ -0.53
ARHGEF40-202ENST00000553709 MED12LQ86YW9 2145 aa11.71□□□□□ -0.54
ARHGEF40-202ENST00000553709 A6NDX4 124 aa11.71□□□□□ -0.54
ARHGEF40-202ENST00000553709 GDF5OSQ5U4N7 250 aa11.71□□□□□ -0.54
ARHGEF40-202ENST00000553709 TRBV7-3A0A075B6L6 115 aa11.7□□□□□ -0.54
ARHGEF40-202ENST00000553709 SND1-IT1Q9HBX3 110 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms